RNA–Protein interactions for RNA: ENST00000436336.6

CPSF4-204, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF4, Length 1,738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-204ENST00000436336 ARAP3Q8WWN8 1544 aa34.97■■■■□ 3.19
CPSF4-204ENST00000436336 PLCH2O75038 1416 aa34.96■■■■□ 3.19
CPSF4-204ENST00000436336 GLI2P10070 1586 aa34.96■■■■□ 3.19
CPSF4-204ENST00000436336 ARHGAP5Q13017 1502 aa34.95■■■■□ 3.18
CPSF4-204ENST00000436336 DIP2BQ9P265 1576 aa34.94■■■■□ 3.18
CPSF4-204ENST00000436336 CAMSAP2Q08AD1 1489 aa34.92■■■■□ 3.18
CPSF4-204ENST00000436336 MAP3K4Q9Y6R4 1608 aa34.88■■■■□ 3.17
CPSF4-204ENST00000436336 SAMD9LQ8IVG5 1584 aa34.88■■■■□ 3.17
CPSF4-204ENST00000436336 ZNF777Q9ULD5 760 aaPredicted RBP34.86■■■■□ 3.17
CPSF4-204ENST00000436336 CD109Q6YHK3 1445 aa34.85■■■■□ 3.17
CPSF4-204ENST00000436336 ZNF644Q9H582 1327 aaPredicted RBP34.84■■■■□ 3.17
CPSF4-204ENST00000436336 KIF13AQ9H1H9 1805 aa34.84■■■■□ 3.17
CPSF4-204ENST00000436336 DNMT1P26358 1616 aaKnown RBP34.83■■■■□ 3.17
CPSF4-204ENST00000436336 EFCAB2Q5VUJ9 269 aa34.81■■■■□ 3.16
CPSF4-204ENST00000436336 CFAP74Q9C0B2 1584 aa34.79■■■■□ 3.16
CPSF4-204ENST00000436336 PLEKHH2Q8IVE3 1493 aa34.78■■■■□ 3.16
CPSF4-204ENST00000436336 ITGAEP38570 1179 aa34.78■■■■□ 3.16
CPSF4-204ENST00000436336 FANCAO15360 1455 aa34.78■■■■□ 3.16
CPSF4-204ENST00000436336 FAM69CQ0P6D2 419 aa34.77■■■■□ 3.16
CPSF4-204ENST00000436336 ARHGEF5Q12774 1597 aa34.75■■■■□ 3.15
CPSF4-204ENST00000436336 CROCC2H7BZ55 1655 aa34.75■■■■□ 3.15
CPSF4-204ENST00000436336 ABCC1P33527 1531 aa34.74■■■■□ 3.15
CPSF4-204ENST00000436336 DAPK1P53355 1430 aa34.73■■■■□ 3.15
CPSF4-204ENST00000436336 KIAA1107Q9UPP5 1409 aa34.73■■■■□ 3.15
CPSF4-204ENST00000436336 SYCP2Q9BX26 1530 aa34.72■■■■□ 3.15
CPSF4-204ENST00000436336 ABCC5O15440 1437 aa34.69■■■■□ 3.14
CPSF4-204ENST00000436336 MBD5Q9P267 1494 aa34.69■■■■□ 3.14
CPSF4-204ENST00000436336 PTPRKQ15262 1439 aa34.69■■■■□ 3.14
CPSF4-204ENST00000436336 TSPOAP1O95153 1857 aa34.68■■■■□ 3.14
CPSF4-204ENST00000436336 PPRC1Q5VV67 1664 aaKnown RBP34.66■■■■□ 3.14
CPSF4-204ENST00000436336 NEO1Q92859 1461 aa34.65■■■■□ 3.14
CPSF4-204ENST00000436336 HNRNPMP52272 730 aaKnown RBP eCLIP34.64■■■■□ 3.14
CPSF4-204ENST00000436336 RSPH4AQ5TD94 716 aa34.64■■■■□ 3.14
CPSF4-204ENST00000436336 CCDC141Q6ZP82 1450 aa34.64■■■■□ 3.14
CPSF4-204ENST00000436336 AKNAQ7Z591 1439 aa34.64■■■■□ 3.14
CPSF4-204ENST00000436336 ARHGEF12Q9NZN5 1544 aa34.64■■■■□ 3.14
CPSF4-204ENST00000436336 ADGBQ8N7X0 1667 aa34.63■■■■□ 3.13
CPSF4-204ENST00000436336 ADGRL1O94910 1474 aa34.62■■■■□ 3.13
CPSF4-204ENST00000436336 SHANK2Q9UPX8 1470 aa34.61■■■■□ 3.13
CPSF4-204ENST00000436336 TEX14Q8IWB6 1497 aa34.58■■■■□ 3.13
CPSF4-204ENST00000436336 MAST1Q9Y2H9 1570 aa34.55■■■■□ 3.12
CPSF4-204ENST00000436336 SCAPERQ9BY12 1400 aa34.54■■■■□ 3.12
CPSF4-204ENST00000436336 ROCK1Q13464 1354 aa34.53■■■■□ 3.12
CPSF4-204ENST00000436336 TSPY4P0CV99 314 aa34.52■■■■□ 3.12
CPSF4-204ENST00000436336 TSPY10P0CW01 314 aa34.52■■■■□ 3.12
CPSF4-204ENST00000436336 CHIC2Q9UKJ5 165 aa34.52■■■■□ 3.12
CPSF4-204ENST00000436336 GCC2Q8IWJ2 1684 aa34.52■■■■□ 3.12
CPSF4-204ENST00000436336 ADGRL2O95490 1459 aa34.52■■■■□ 3.12
CPSF4-204ENST00000436336 C9orf84Q5VXU9 1444 aa34.51■■■■□ 3.12
CPSF4-204ENST00000436336 TRAPPC8Q9Y2L5 1435 aa34.51■■■■□ 3.12
CPSF4-204ENST00000436336 HFM1A2PYH4 1435 aa34.49■■■■□ 3.11
CPSF4-204ENST00000436336 SETD5Q9C0A6 1442 aa34.46■■■■□ 3.11
CPSF4-204ENST00000436336 NAIPQ13075 1403 aa34.44■■■■□ 3.1
CPSF4-204ENST00000436336 ZNF518AQ6AHZ1 1483 aa34.44■■■■□ 3.1
CPSF4-204ENST00000436336 NCOA1Q15788 1441 aa34.44■■■■□ 3.1
CPSF4-204ENST00000436336 ANKRD30AQ9BXX3 1397 aa34.43■■■■□ 3.1
CPSF4-204ENST00000436336 POGZQ7Z3K3 1410 aa34.42■■■■□ 3.1
CPSF4-204ENST00000436336 RICTORQ6R327 1708 aa34.41■■■■□ 3.1
CPSF4-204ENST00000436336 RRP7BPQ9NSQ0 103 aa34.41■■■■□ 3.1
CPSF4-204ENST00000436336 DENND4BO75064 1496 aaPredicted RBP34.41■■■■□ 3.1
CPSF4-204ENST00000436336 PLXNC1O60486 1568 aa34.4■■■■□ 3.1
CPSF4-204ENST00000436336 KDM5CP41229 1560 aa34.39■■■■□ 3.1
CPSF4-204ENST00000436336 TRHP20396 242 aaPredicted RBP34.39■■■■□ 3.1
CPSF4-204ENST00000436336 AFAP1Q8N556 730 aa34.39■■■■□ 3.1
CPSF4-204ENST00000436336 INO80Q9ULG1 1556 aaPredicted RBP34.39■■■■□ 3.1
CPSF4-204ENST00000436336 RTEL1-TNFRSF6BF6WH68 1400 aa34.38■■■■□ 3.09
CPSF4-204ENST00000436336 RAB3GAP2Q9H2M9 1393 aa34.37■■■■□ 3.09
CPSF4-204ENST00000436336 ZFYVE16Q7Z3T8 1539 aa34.37■■■■□ 3.09
CPSF4-204ENST00000436336 SPAG9O60271 1321 aaKnown RBP34.35■■■■□ 3.09
CPSF4-204ENST00000436336 ATP7AQ04656 1500 aa34.34■■■■□ 3.09
CPSF4-204ENST00000436336 KIDINS220Q9ULH0 1771 aa34.31■■■■□ 3.08
CPSF4-204ENST00000436336 HRCP23327 699 aa34.31■■■■□ 3.08
CPSF4-204ENST00000436336 HECW2Q9P2P5 1572 aa34.3■■■■□ 3.08
CPSF4-204ENST00000436336 FRMPD1Q5SYB0 1578 aa34.3■■■■□ 3.08
CPSF4-204ENST00000436336 KIF15Q9NS87 1388 aa34.29■■■■□ 3.08
CPSF4-204ENST00000436336 MLH3Q9UHC1 1453 aa34.28■■■■□ 3.08
CPSF4-204ENST00000436336 KDM6BO15054 1643 aa34.27■■■■□ 3.08
CPSF4-204ENST00000436336 RAPGEF3O95398 923 aa34.25■■■■□ 3.07
CPSF4-204ENST00000436336 ZMYM4Q5VZL5 1548 aa34.24■■■■□ 3.07
CPSF4-204ENST00000436336 DUOX2Q9NRD8 1548 aa34.24■■■■□ 3.07
CPSF4-204ENST00000436336 ANKRD50Q9ULJ7 1429 aa34.22■■■■□ 3.07
CPSF4-204ENST00000436336 MYT1LQ9UL68 1186 aa34.19■■■■□ 3.06
CPSF4-204ENST00000436336 COL17A1Q9UMD9 1497 aaPredicted RBP34.17■■■■□ 3.06
CPSF4-204ENST00000436336 ACIN1Q9UKV3 1341 aaKnown RBP34.17■■■■□ 3.06
CPSF4-204ENST00000436336 ABCA6Q8N139 1617 aa34.15■■■■□ 3.06
CPSF4-204ENST00000436336 ERBINQ96RT1 1412 aa34.14■■■■□ 3.06
CPSF4-204ENST00000436336 MAGI2Q86UL8 1455 aa34.13■■■■□ 3.05
CPSF4-204ENST00000436336 DIP2CQ9Y2E4 1556 aa34.1■■■■□ 3.05
CPSF4-204ENST00000436336 EIF2AK4Q9P2K8 1649 aaKnown RBP34.08■■■■□ 3.05
CPSF4-204ENST00000436336 DHX57Q6P158 1386 aaKnown RBP34.06■■■■□ 3.04
CPSF4-204ENST00000436336 DHX29Q7Z478 1369 aaKnown RBP34.06■■■■□ 3.04
CPSF4-204ENST00000436336 A2MP01023 1474 aa34.05■■■■□ 3.04
CPSF4-204ENST00000436336 CCER1Q8TC90 406 aaPredicted RBP34.04■■■■□ 3.04
CPSF4-204ENST00000436336 UNC13BO14795 1591 aa34.03■■■■□ 3.04
CPSF4-204ENST00000436336 YEATS2Q9ULM3 1422 aa34.03■■■■□ 3.04
CPSF4-204ENST00000436336 TRIM52Q96A61 297 aa34■■■■□ 3.03
CPSF4-204ENST00000436336 BCORL1Q5H9F3 1711 aa33.99■■■■□ 3.03
CPSF4-204ENST00000436336 ARHGEF40Q8TER5 1519 aa33.98■■■■□ 3.03
CPSF4-204ENST00000436336 KDM5DQ9BY66 1539 aa33.98■■■■□ 3.03
CPSF4-204ENST00000436336 DEPDC5O75140 1603 aa33.97■■■■□ 3.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms