RNA–Protein interactions for RNA: ENST00000435643.1

AC007879.1-201, humanhuman

TSL 4 BASIC

Gene AC007879.1, Length 554 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC007879.1-201ENST00000435643 VASPP50552 380 aaPredicted RBP13.67□□□□□ -0.22
AC007879.1-201ENST00000435643 IRX5P78411 483 aaPredicted RBP13.65□□□□□ -0.22
AC007879.1-201ENST00000435643 WDR97A6NE52 1622 aa13.64□□□□□ -0.23
AC007879.1-201ENST00000435643 PLCG2P16885 1265 aa13.64□□□□□ -0.23
AC007879.1-201ENST00000435643 TDRD9Q8NDG6 1382 aaKnown RBP13.63□□□□□ -0.23
AC007879.1-201ENST00000435643 ABCA10Q8WWZ4 1543 aa13.63□□□□□ -0.23
AC007879.1-201ENST00000435643 AQRO60306 1485 aaKnown RBP eCLIP13.62□□□□□ -0.23
AC007879.1-201ENST00000435643 TRIM41Q8WV44 630 aa13.62□□□□□ -0.23
AC007879.1-201ENST00000435643 PCDHB8Q9UN66 801 aa13.61□□□□□ -0.23
AC007879.1-201ENST00000435643 EIF4G3O43432 1585 aaKnown RBP13.61□□□□□ -0.23
AC007879.1-201ENST00000435643 GSE1Q14687 1217 aa13.58□□□□□ -0.24
AC007879.1-201ENST00000435643 KLHL34Q8N239 644 aa13.58□□□□□ -0.24
AC007879.1-201ENST00000435643 SLAIN1Q8ND83 568 aa13.56□□□□□ -0.24
AC007879.1-201ENST00000435643 OCEL1Q9H607 264 aa13.56□□□□□ -0.24
AC007879.1-201ENST00000435643 ABCA5Q8WWZ7 1642 aa13.56□□□□□ -0.24
AC007879.1-201ENST00000435643 GAPVD1Q14C86 1478 aa13.55□□□□□ -0.24
AC007879.1-201ENST00000435643 PBRM1Q86U86 1689 aa13.53□□□□□ -0.24
AC007879.1-201ENST00000435643 ZNF467Q7Z7K2 595 aaPredicted RBP13.52□□□□□ -0.25
AC007879.1-201ENST00000435643 GRIN2BQ13224 1484 aa13.52□□□□□ -0.25
AC007879.1-201ENST00000435643 CHRM1P11229 460 aaPredicted RBP13.51□□□□□ -0.25
AC007879.1-201ENST00000435643 RUSC2Q8N2Y8 1516 aa13.49□□□□□ -0.25
AC007879.1-201ENST00000435643 KIF27Q86VH2 1401 aa13.49□□□□□ -0.25
AC007879.1-201ENST00000435643 SNAPC4Q5SXM2 1469 aa13.48□□□□□ -0.25
AC007879.1-201ENST00000435643 ERICH3Q5RHP9 1530 aa13.46□□□□□ -0.25
AC007879.1-201ENST00000435643 MAGI1Q96QZ7 1491 aaPredicted RBP13.46□□□□□ -0.25
AC007879.1-201ENST00000435643 IGF1RP08069 1367 aa13.45□□□□□ -0.26
AC007879.1-201ENST00000435643 ST18O60284 1047 aa13.44□□□□□ -0.26
AC007879.1-201ENST00000435643 PDCD7Q8N8D1 485 aaKnown RBP13.44□□□□□ -0.26
AC007879.1-201ENST00000435643 CHD1O14646 1710 aa13.44□□□□□ -0.26
AC007879.1-201ENST00000435643 SYNJ2O15056 1496 aa13.42□□□□□ -0.26
AC007879.1-201ENST00000435643 CHMP7Q8WUX9 453 aaPredicted RBP13.41□□□□□ -0.26
AC007879.1-201ENST00000435643 ADAMTS12P58397 1594 aa13.41□□□□□ -0.26
AC007879.1-201ENST00000435643 FHAD1B1AJZ9 1412 aa13.4□□□□□ -0.26
AC007879.1-201ENST00000435643 PSEN1P49768 467 aa13.4□□□□□ -0.26
AC007879.1-201ENST00000435643 IFNLR1Q8IU57 520 aaPredicted RBP13.4□□□□□ -0.26
AC007879.1-201ENST00000435643 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.4□□□□□ -0.26
AC007879.1-201ENST00000435643 MKRN3Q13064 507 aaKnown RBP13.39□□□□□ -0.27
AC007879.1-201ENST00000435643 CDAN1Q8IWY9 1227 aa13.39□□□□□ -0.27
AC007879.1-201ENST00000435643 GOLGA2Q08379 1002 aa13.38□□□□□ -0.27
AC007879.1-201ENST00000435643 SPOCK2Q92563 424 aa13.38□□□□□ -0.27
AC007879.1-201ENST00000435643 CUL7Q14999 1698 aa13.37□□□□□ -0.27
AC007879.1-201ENST00000435643 CARMIL1Q5VZK9 1371 aa13.37□□□□□ -0.27
AC007879.1-201ENST00000435643 FAM9AQ8IZU1 332 aaPredicted RBP13.36□□□□□ -0.27
AC007879.1-201ENST00000435643 EEA1Q15075 1411 aa13.35□□□□□ -0.27
AC007879.1-201ENST00000435643 GRIN2AQ12879 1464 aa13.35□□□□□ -0.27
AC007879.1-201ENST00000435643 PDAP1Q13442 181 aaKnown RBP13.34□□□□□ -0.27
AC007879.1-201ENST00000435643 TMEM121BQ9BXQ6 578 aaPredicted RBP13.33□□□□□ -0.28
AC007879.1-201ENST00000435643 SNPHO15079 494 aa13.32□□□□□ -0.28
AC007879.1-201ENST00000435643 ILDR1Q86SU0 546 aaPredicted RBP13.32□□□□□ -0.28
AC007879.1-201ENST00000435643 L3MBTL3Q96JM7 780 aaPredicted RBP13.32□□□□□ -0.28
AC007879.1-201ENST00000435643 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.32□□□□□ -0.28
AC007879.1-201ENST00000435643 DNAJC5Q9H3Z4 198 aa13.31□□□□□ -0.28
AC007879.1-201ENST00000435643 PRXQ9BXM0 1461 aa13.3□□□□□ -0.28
AC007879.1-201ENST00000435643 C3orf67Q6ZVT6 689 aa13.3□□□□□ -0.28
AC007879.1-201ENST00000435643 CIZ1Q9ULV3 898 aaPredicted RBP13.3□□□□□ -0.28
AC007879.1-201ENST00000435643 RAPGEF2Q9Y4G8 1499 aa13.29□□□□□ -0.28
AC007879.1-201ENST00000435643 CEP170Q5SW79 1584 aa13.29□□□□□ -0.28
AC007879.1-201ENST00000435643 NUP160Q12769 1436 aa13.29□□□□□ -0.28
AC007879.1-201ENST00000435643 CLASP1Q7Z460 1538 aa13.28□□□□□ -0.28
AC007879.1-201ENST00000435643 CABP2Q9NPB3 220 aa13.23□□□□□ -0.29
AC007879.1-201ENST00000435643 KIF21BO75037 1637 aa13.21□□□□□ -0.29
AC007879.1-201ENST00000435643 KIAA0586Q9BVV6 1533 aa13.21□□□□□ -0.29
AC007879.1-201ENST00000435643 DPY19L2Q6NUT2 758 aa13.19□□□□□ -0.3
AC007879.1-201ENST00000435643 MARVELD3Q96A59 401 aa13.19□□□□□ -0.3
AC007879.1-201ENST00000435643 JPH4Q96JJ6 628 aa13.19□□□□□ -0.3
AC007879.1-201ENST00000435643 SHROOM2Q13796 1616 aa13.17□□□□□ -0.3
AC007879.1-201ENST00000435643 CTTNBP2Q8WZ74 1663 aa13.17□□□□□ -0.3
AC007879.1-201ENST00000435643 ARHGEF11O15085 1522 aa13.15□□□□□ -0.3
AC007879.1-201ENST00000435643 RIMBP3CA6NJZ7 1639 aa13.15□□□□□ -0.3
AC007879.1-201ENST00000435643 RIMBP3BA6NNM3 1639 aa13.15□□□□□ -0.3
AC007879.1-201ENST00000435643 RIMBP3Q9UFD9 1639 aa13.15□□□□□ -0.3
AC007879.1-201ENST00000435643 IQGAP2Q13576 1575 aa13.15□□□□□ -0.3
AC007879.1-201ENST00000435643 BOLA1Q9Y3E2 137 aa13.14□□□□□ -0.31
AC007879.1-201ENST00000435643 GOLGA3Q08378 1498 aa13.14□□□□□ -0.31
AC007879.1-201ENST00000435643 ERCC6L2Q5T890 1561 aa13.14□□□□□ -0.31
AC007879.1-201ENST00000435643 PRG4Q92954 1404 aaPredicted RBP13.13□□□□□ -0.31
AC007879.1-201ENST00000435643 UBTFP17480 764 aaKnown RBP13.11□□□□□ -0.31
AC007879.1-201ENST00000435643 EMP3P54852 163 aa13.1□□□□□ -0.31
AC007879.1-201ENST00000435643 UGGT2Q9NYU1 1516 aa13.09□□□□□ -0.31
AC007879.1-201ENST00000435643 G3V3G9 751 aa13.09□□□□□ -0.31
AC007879.1-201ENST00000435643 LOC105371045A0A1W2PR82 267 aa13.07□□□□□ -0.32
AC007879.1-201ENST00000435643 SPNS2Q8IVW8 549 aa13.07□□□□□ -0.32
AC007879.1-201ENST00000435643 ARAP1Q96P48 1450 aa13.07□□□□□ -0.32
AC007879.1-201ENST00000435643 DISP1Q96F81 1524 aa13.07□□□□□ -0.32
AC007879.1-201ENST00000435643 EFCAB3Q8N7B9 438 aa13.06□□□□□ -0.32
AC007879.1-201ENST00000435643 MMRN1Q13201 1228 aa13.05□□□□□ -0.32
AC007879.1-201ENST00000435643 HOXB3P14651 431 aaPredicted RBP13.04□□□□□ -0.32
AC007879.1-201ENST00000435643 RANGAP1P46060 587 aaPredicted RBP13.04□□□□□ -0.32
AC007879.1-201ENST00000435643 CYB5RLQ6IPT4 315 aa13.04□□□□□ -0.32
AC007879.1-201ENST00000435643 CARMIL2Q6F5E8 1435 aa13.04□□□□□ -0.32
AC007879.1-201ENST00000435643 KIAA0556O60303 1618 aa13.03□□□□□ -0.32
AC007879.1-201ENST00000435643 HS3ST6Q96QI5 342 aa13.03□□□□□ -0.32
AC007879.1-201ENST00000435643 TNIKQ9UKE5 1360 aa13.03□□□□□ -0.32
AC007879.1-201ENST00000435643 POTEB3A0JP26 581 aa13.02□□□□□ -0.33
AC007879.1-201ENST00000435643 POTEBQ6S5H4 581 aa13.02□□□□□ -0.33
AC007879.1-201ENST00000435643 P3H3Q8IVL6 736 aa13.01□□□□□ -0.33
AC007879.1-201ENST00000435643 RNF25Q96BH1 459 aaPredicted RBP13.01□□□□□ -0.33
AC007879.1-201ENST00000435643 SAMD9Q5K651 1589 aa13.01□□□□□ -0.33
AC007879.1-201ENST00000435643 FAM205CA6NFA0 338 aa13□□□□□ -0.33
AC007879.1-201ENST00000435643 RIOK3O14730 519 aaKnown RBP13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms