RNA–Protein interactions for RNA: ENST00000433949.7

CTCFL-209, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,234 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-209ENST00000433949 GPATCH8Q9UKJ3 1502 aaKnown RBP17.42■□□□□ 0.38
CTCFL-209ENST00000433949 ABCC10Q5T3U5 1492 aa17.42■□□□□ 0.38
CTCFL-209ENST00000433949 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.42■□□□□ 0.383e-12■■■■■ 30.2
CTCFL-209ENST00000433949 TCOF1Q13428 1488 aaKnown RBP17.41■□□□□ 0.38
CTCFL-209ENST00000433949 MIA2Q96PC5 1412 aa17.4■□□□□ 0.38
CTCFL-209ENST00000433949 TTC37Q6PGP7 1564 aa17.4■□□□□ 0.38
CTCFL-209ENST00000433949 HFM1A2PYH4 1435 aa17.4■□□□□ 0.38
CTCFL-209ENST00000433949 FAM69CQ0P6D2 419 aa17.39■□□□□ 0.37
CTCFL-209ENST00000433949 CHIC2Q9UKJ5 165 aa17.36■□□□□ 0.37
CTCFL-209ENST00000433949 HNRNPMP52272 730 aaKnown RBP eCLIP17.35■□□□□ 0.37
CTCFL-209ENST00000433949 ARHGAP5Q13017 1502 aa17.34■□□□□ 0.37
CTCFL-209ENST00000433949 CDC42BPAQ5VT25 1732 aa17.34■□□□□ 0.37
CTCFL-209ENST00000433949 TIMELESSQ9UNS1 1208 aa17.33■□□□□ 0.37
CTCFL-209ENST00000433949 GCC2Q8IWJ2 1684 aa17.33■□□□□ 0.36
CTCFL-209ENST00000433949 AKNAQ7Z591 1439 aa17.32■□□□□ 0.36
CTCFL-209ENST00000433949 PTPRKQ15262 1439 aa17.32■□□□□ 0.36
CTCFL-209ENST00000433949 EFCAB2Q5VUJ9 269 aa17.32■□□□□ 0.36
CTCFL-209ENST00000433949 PLCH2O75038 1416 aa17.31■□□□□ 0.36
CTCFL-209ENST00000433949 CD109Q6YHK3 1445 aa17.31■□□□□ 0.36
CTCFL-209ENST00000433949 NAIPQ13075 1403 aa17.3■□□□□ 0.36
CTCFL-209ENST00000433949 CAMSAP2Q08AD1 1489 aa17.3■□□□□ 0.36
CTCFL-209ENST00000433949 ITSN2Q9NZM3 1697 aa17.29■□□□□ 0.36
CTCFL-209ENST00000433949 CDC42BPBQ9Y5S2 1711 aa17.29■□□□□ 0.36
CTCFL-209ENST00000433949 TRHP20396 242 aaPredicted RBP17.28■□□□□ 0.36
CTCFL-209ENST00000433949 MYO5CQ9NQX4 1742 aa17.28■□□□□ 0.36
CTCFL-209ENST00000433949 ACIN1Q9UKV3 1341 aaKnown RBP17.28■□□□□ 0.36
CTCFL-209ENST00000433949 ABCA9Q8IUA7 1624 aa17.27■□□□□ 0.36
CTCFL-209ENST00000433949 PREX2Q70Z35 1606 aa17.27■□□□□ 0.36
CTCFL-209ENST00000433949 RRP7BPQ9NSQ0 103 aa17.26■□□□□ 0.35
CTCFL-209ENST00000433949 FANCAO15360 1455 aa17.25■□□□□ 0.35
CTCFL-209ENST00000433949 DNMT1P26358 1616 aaKnown RBP17.23■□□□□ 0.35
CTCFL-209ENST00000433949 SAMD9LQ8IVG5 1584 aa17.23■□□□□ 0.35
CTCFL-209ENST00000433949 ABCC5O15440 1437 aa17.23■□□□□ 0.35
CTCFL-209ENST00000433949 AFAP1Q8N556 730 aa17.23■□□□□ 0.35
CTCFL-209ENST00000433949 DIP2BQ9P265 1576 aa17.22■□□□□ 0.35
CTCFL-209ENST00000433949 DAPK1P53355 1430 aa17.22■□□□□ 0.35
CTCFL-209ENST00000433949 TSPY4P0CV99 314 aa17.21■□□□□ 0.35
CTCFL-209ENST00000433949 TSPY10P0CW01 314 aa17.21■□□□□ 0.35
CTCFL-209ENST00000433949 SYCP2Q9BX26 1530 aa17.21■□□□□ 0.35
CTCFL-209ENST00000433949 MYT1LQ9UL68 1186 aa17.2■□□□□ 0.34
CTCFL-209ENST00000433949 ROCK1Q13464 1354 aa17.2■□□□□ 0.34
CTCFL-209ENST00000433949 ARHGEF12Q9NZN5 1544 aa17.2■□□□□ 0.34
CTCFL-209ENST00000433949 TSPOAP1O95153 1857 aa17.19■□□□□ 0.34
CTCFL-209ENST00000433949 MBD5Q9P267 1494 aa17.18■□□□□ 0.34
CTCFL-209ENST00000433949 SCAPERQ9BY12 1400 aa17.18■□□□□ 0.34
CTCFL-209ENST00000433949 ADGRL1O94910 1474 aa17.17■□□□□ 0.34
CTCFL-209ENST00000433949 TRAPPC8Q9Y2L5 1435 aa17.17■□□□□ 0.34
CTCFL-209ENST00000433949 RAPGEF3O95398 923 aa17.17■□□□□ 0.34
CTCFL-209ENST00000433949 CENPBP07199 599 aaPredicted RBP17.17■□□□□ 0.34
CTCFL-209ENST00000433949 GLI2P10070 1586 aa17.16■□□□□ 0.34
CTCFL-209ENST00000433949 SIN3AQ96ST3 1273 aa17.16■□□□□ 0.34
CTCFL-209ENST00000433949 MAP3K4Q9Y6R4 1608 aa17.15■□□□□ 0.34
CTCFL-209ENST00000433949 NEUROD1Q13562 356 aa17.15■□□□□ 0.34
CTCFL-209ENST00000433949 ARAP3Q8WWN8 1544 aa17.14■□□□□ 0.33
CTCFL-209ENST00000433949 KIAA1107Q9UPP5 1409 aa17.14■□□□□ 0.33
CTCFL-209ENST00000433949 RSPH4AQ5TD94 716 aa17.14■□□□□ 0.33
CTCFL-209ENST00000433949 ADGBQ8N7X0 1667 aa17.14■□□□□ 0.33
CTCFL-209ENST00000433949 CCDC141Q6ZP82 1450 aa17.13■□□□□ 0.33
CTCFL-209ENST00000433949 PLEKHH2Q8IVE3 1493 aa17.13■□□□□ 0.33
CTCFL-209ENST00000433949 ABCC1P33527 1531 aa17.13■□□□□ 0.33
CTCFL-209ENST00000433949 KIF13AQ9H1H9 1805 aa17.13■□□□□ 0.33
CTCFL-209ENST00000433949 C9orf84Q5VXU9 1444 aa17.13■□□□□ 0.33
CTCFL-209ENST00000433949 CROCC2H7BZ55 1655 aa17.12■□□□□ 0.33
CTCFL-209ENST00000433949 TONSLQ96HA7 1378 aa17.12■□□□□ 0.33
CTCFL-209ENST00000433949 MIER1Q8N108 512 aa17.11■□□□□ 0.33
CTCFL-209ENST00000433949 SPAG9O60271 1321 aaKnown RBP17.11■□□□□ 0.33
CTCFL-209ENST00000433949 PPP1R15AO75807 674 aaPredicted RBP17.11■□□□□ 0.33
CTCFL-209ENST00000433949 KDM6BO15054 1643 aa17.09■□□□□ 0.33
CTCFL-209ENST00000433949 NCOA1Q15788 1441 aa17.09■□□□□ 0.33
CTCFL-209ENST00000433949 ANKRD30AQ9BXX3 1397 aa17.09■□□□□ 0.33
CTCFL-209ENST00000433949 ARHGEF5Q12774 1597 aa17.08■□□□□ 0.33
CTCFL-209ENST00000433949 NEO1Q92859 1461 aa17.08■□□□□ 0.32
CTCFL-209ENST00000433949 ADGRL2O95490 1459 aa17.06■□□□□ 0.32
CTCFL-209ENST00000433949 TRIM52Q96A61 297 aa17.06■□□□□ 0.32
CTCFL-209ENST00000433949 PPRC1Q5VV67 1664 aaKnown RBP17.06■□□□□ 0.32
CTCFL-209ENST00000433949 KIF15Q9NS87 1388 aa17.05■□□□□ 0.32
CTCFL-209ENST00000433949 DENND4BO75064 1496 aaPredicted RBP17.05■□□□□ 0.32
CTCFL-209ENST00000433949 TEX14Q8IWB6 1497 aa17.05■□□□□ 0.32
CTCFL-209ENST00000433949 CFAP74Q9C0B2 1584 aa17.04■□□□□ 0.32
CTCFL-209ENST00000433949 POGZQ7Z3K3 1410 aa17.03■□□□□ 0.32
CTCFL-209ENST00000433949 SHANK2Q9UPX8 1470 aa17.03■□□□□ 0.32
CTCFL-209ENST00000433949 ZNF518AQ6AHZ1 1483 aa17.02■□□□□ 0.32
CTCFL-209ENST00000433949 MPHOSPH9Q99550 1183 aa17.02■□□□□ 0.32
CTCFL-209ENST00000433949 COL17A1Q9UMD9 1497 aaPredicted RBP17■□□□□ 0.31
CTCFL-209ENST00000433949 ANKRD50Q9ULJ7 1429 aa17■□□□□ 0.31
CTCFL-209ENST00000433949 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.99■□□□□ 0.311e-10■□□□□ 8.3
CTCFL-209ENST00000433949 ATP7AQ04656 1500 aa16.97■□□□□ 0.31
CTCFL-209ENST00000433949 ZFYVE16Q7Z3T8 1539 aa16.97■□□□□ 0.31
CTCFL-209ENST00000433949 RTEL1-TNFRSF6BF6WH68 1400 aa16.96■□□□□ 0.3
CTCFL-209ENST00000433949 SCAF1Q9H7N4 1312 aaKnown RBP16.95■□□□□ 0.3
CTCFL-209ENST00000433949 MAST1Q9Y2H9 1570 aa16.95■□□□□ 0.3
CTCFL-209ENST00000433949 YEATS2Q9ULM3 1422 aa16.94■□□□□ 0.3
CTCFL-209ENST00000433949 ANKRD30BQ9BXX2 1392 aa16.93■□□□□ 0.3
CTCFL-209ENST00000433949 KIF3BO15066 747 aa16.93■□□□□ 0.3
CTCFL-209ENST00000433949 KDM5CP41229 1560 aa16.93■□□□□ 0.3
CTCFL-209ENST00000433949 RPRD2Q5VT52 1461 aaKnown RBP16.93■□□□□ 0.3
CTCFL-209ENST00000433949 FOXD1Q16676 465 aa16.92■□□□□ 0.3
CTCFL-209ENST00000433949 KIDINS220Q9ULH0 1771 aa16.92■□□□□ 0.3
CTCFL-209ENST00000433949 RICTORQ6R327 1708 aa16.92■□□□□ 0.3
CTCFL-209ENST00000433949 FRMPD1Q5SYB0 1578 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms