RNA–Protein interactions for RNA: ENST00000431889.6

SMARCE1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2 BASIC

Gene SMARCE1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-205ENST00000431889 SCAPERQ9BY12 1400 aa23.4■■□□□ 1.34
SMARCE1-205ENST00000431889 MYO5CQ9NQX4 1742 aa23.4■■□□□ 1.34
SMARCE1-205ENST00000431889 ZFYVE16Q7Z3T8 1539 aa23.37■■□□□ 1.33
SMARCE1-205ENST00000431889 PCF11O94913 1555 aaKnown RBP23.36■■□□□ 1.33
SMARCE1-205ENST00000431889 CDK11AQ9UQ88 783 aaPredicted RBP23.34■■□□□ 1.33
SMARCE1-205ENST00000431889 ZMYM4Q5VZL5 1548 aa23.34■■□□□ 1.33
SMARCE1-205ENST00000431889 TROQ12816 1431 aaPredicted RBP23.32■■□□□ 1.32
SMARCE1-205ENST00000431889 POGZQ7Z3K3 1410 aa23.32■■□□□ 1.32
SMARCE1-205ENST00000431889 ARHGAP5Q13017 1502 aa23.32■■□□□ 1.32
SMARCE1-205ENST00000431889 EFCAB2Q5VUJ9 269 aa23.31■■□□□ 1.32
SMARCE1-205ENST00000431889 MYT1LQ9UL68 1186 aa23.28■■□□□ 1.32
SMARCE1-205ENST00000431889 AFAP1Q8N556 730 aa23.27■■□□□ 1.32
SMARCE1-205ENST00000431889 CLIP1P30622 1438 aa23.27■■□□□ 1.32
SMARCE1-205ENST00000431889 CDC42BPBQ9Y5S2 1711 aa23.26■■□□□ 1.31
SMARCE1-205ENST00000431889 HSPA2P54652 639 aa23.24■■□□□ 1.31
SMARCE1-205ENST00000431889 FER1L4A9Z1Z3 1794 aa23.24■■□□□ 1.31
SMARCE1-205ENST00000431889 CASKIN1Q8WXD9 1431 aa23.24■■□□□ 1.31
SMARCE1-205ENST00000431889 MAGI2Q86UL8 1455 aa23.23■■□□□ 1.31
SMARCE1-205ENST00000431889 LMTK3Q96Q04 1460 aa23.23■■□□□ 1.31
SMARCE1-205ENST00000431889 ATP10AO60312 1499 aa23.2■■□□□ 1.31
SMARCE1-205ENST00000431889 PREX2Q70Z35 1606 aa23.18■■□□□ 1.3
SMARCE1-205ENST00000431889 CEBPAP49715 358 aaPredicted RBP23.18■■□□□ 1.3
SMARCE1-205ENST00000431889 CCDC18Q5T9S5 1454 aa23.18■■□□□ 1.3
SMARCE1-205ENST00000431889 C9orf84Q5VXU9 1444 aa23.17■■□□□ 1.3
SMARCE1-205ENST00000431889 ZNF518AQ6AHZ1 1483 aa23.17■■□□□ 1.3
SMARCE1-205ENST00000431889 CDC42BPAQ5VT25 1732 aa23.17■■□□□ 1.3
SMARCE1-205ENST00000431889 ARHGEF12Q9NZN5 1544 aa23.17■■□□□ 1.3
SMARCE1-205ENST00000431889 ZNF777Q9ULD5 760 aaPredicted RBP23.16■■□□□ 1.3
SMARCE1-205ENST00000431889 TRAPPC8Q9Y2L5 1435 aa23.16■■□□□ 1.3
SMARCE1-205ENST00000431889 KDM5CP41229 1560 aa23.14■■□□□ 1.29
SMARCE1-205ENST00000431889 FYCO1Q9BQS8 1478 aa23.13■■□□□ 1.29
SMARCE1-205ENST00000431889 DIP2CQ9Y2E4 1556 aa23.13■■□□□ 1.29
SMARCE1-205ENST00000431889 ABCA6Q8N139 1617 aa23.13■■□□□ 1.29
SMARCE1-205ENST00000431889 ABCC1P33527 1531 aa23.12■■□□□ 1.29
SMARCE1-205ENST00000431889 ITSN2Q9NZM3 1697 aa23.12■■□□□ 1.29
SMARCE1-205ENST00000431889 SAMD9LQ8IVG5 1584 aa23.06■■□□□ 1.28
SMARCE1-205ENST00000431889 HNRNPMP52272 730 aaKnown RBP eCLIP23.06■■□□□ 1.28
SMARCE1-205ENST00000431889 KIDINS220Q9ULH0 1771 aa23.04■■□□□ 1.28
SMARCE1-205ENST00000431889 SYCP2Q9BX26 1530 aa23.03■■□□□ 1.28
SMARCE1-205ENST00000431889 MLH3Q9UHC1 1453 aa23.03■■□□□ 1.28
SMARCE1-205ENST00000431889 GPATCH8Q9UKJ3 1502 aaKnown RBP23.03■■□□□ 1.28
SMARCE1-205ENST00000431889 PREX1Q8TCU6 1659 aa22.99■■□□□ 1.27
SMARCE1-205ENST00000431889 MTUS2Q5JR59 1369 aa22.98■■□□□ 1.27
SMARCE1-205ENST00000431889 FBXO41Q8TF61 875 aa22.97■■□□□ 1.27
SMARCE1-205ENST00000431889 CFDP1Q9UEE9 299 aaPredicted RBP22.97■■□□□ 1.27
SMARCE1-205ENST00000431889 C3P01024 1663 aa22.97■■□□□ 1.27
SMARCE1-205ENST00000431889 CCNB3Q8WWL7 1395 aa22.96■■□□□ 1.27
SMARCE1-205ENST00000431889 SUPT6HQ7KZ85 1726 aaKnown RBP22.96■■□□□ 1.27
SMARCE1-205ENST00000431889 ZNF644Q9H582 1327 aaPredicted RBP22.96■■□□□ 1.27
SMARCE1-205ENST00000431889 REREQ9P2R6 1566 aa22.96■■□□□ 1.27
SMARCE1-205ENST00000431889 CEP162Q5TB80 1403 aa22.95■■□□□ 1.27
SMARCE1-205ENST00000431889 SPAG9O60271 1321 aaKnown RBP22.94■■□□□ 1.26
SMARCE1-205ENST00000431889 ESF1Q9H501 851 aaKnown RBP22.93■■□□□ 1.26
SMARCE1-205ENST00000431889 LOC105371045A0A1W2PR82 267 aa22.93■■□□□ 1.26
SMARCE1-205ENST00000431889 AGLP35573 1532 aa22.9■■□□□ 1.26
SMARCE1-205ENST00000431889 TIAM1Q13009 1591 aa22.9■■□□□ 1.26
SMARCE1-205ENST00000431889 STRCQ7RTU9 1775 aa22.89■■□□□ 1.25
SMARCE1-205ENST00000431889 ATP7AQ04656 1500 aa22.88■■□□□ 1.25
SMARCE1-205ENST00000431889 UHRF1BP1Q6BDS2 1440 aa22.88■■□□□ 1.25
SMARCE1-205ENST00000431889 INO80Q9ULG1 1556 aaPredicted RBP22.85■■□□□ 1.25
SMARCE1-205ENST00000431889 EHBP1L1Q8N3D4 1523 aa22.85■■□□□ 1.25
SMARCE1-205ENST00000431889 CLTCQ00610 1675 aaKnown RBP22.83■■□□□ 1.25
SMARCE1-205ENST00000431889 GGT6Q6P531 493 aa22.83■■□□□ 1.25
SMARCE1-205ENST00000431889 SETD1BQ9UPS6 1966 aaKnown RBP22.83■■□□□ 1.24
SMARCE1-205ENST00000431889 KIAA1107Q9UPP5 1409 aa22.82■■□□□ 1.24
SMARCE1-205ENST00000431889 CERKQ8TCT0 537 aa22.82■■□□□ 1.24
SMARCE1-205ENST00000431889 A2MP01023 1474 aa22.81■■□□□ 1.24
SMARCE1-205ENST00000431889 PLEKHH2Q8IVE3 1493 aa22.81■■□□□ 1.24
SMARCE1-205ENST00000431889 PLXNC1O60486 1568 aa22.78■■□□□ 1.24
SMARCE1-205ENST00000431889 ZMYM3Q14202 1370 aa22.77■■□□□ 1.24
SMARCE1-205ENST00000431889 MBD5Q9P267 1494 aa22.77■■□□□ 1.24
SMARCE1-205ENST00000431889 NCOA2Q15596 1464 aa22.76■■□□□ 1.23
SMARCE1-205ENST00000431889 CNTLNQ9NXG0 1405 aa22.76■■□□□ 1.23
SMARCE1-205ENST00000431889 MROH2AA6NES4 1674 aa22.74■■□□□ 1.23
SMARCE1-205ENST00000431889 ADGBQ8N7X0 1667 aa22.74■■□□□ 1.23
SMARCE1-205ENST00000431889 CAMSAP2Q08AD1 1489 aa22.72■■□□□ 1.23
SMARCE1-205ENST00000431889 DMRT2Q9Y5R5 561 aa22.69■■□□□ 1.22
SMARCE1-205ENST00000431889 CAMSAP1Q5T5Y3 1602 aa22.69■■□□□ 1.22
SMARCE1-205ENST00000431889 NCKAP5LQ9HCH0 1330 aa22.68■■□□□ 1.22
SMARCE1-205ENST00000431889 KANK4Q5T7N3 995 aaPredicted RBP22.67■■□□□ 1.22
SMARCE1-205ENST00000431889 VPS8Q8N3P4 1428 aa22.66■■□□□ 1.22
SMARCE1-205ENST00000431889 MYO3AQ8NEV4 1616 aa22.66■■□□□ 1.22
SMARCE1-205ENST00000431889 KIF3BO15066 747 aa22.66■■□□□ 1.22
SMARCE1-205ENST00000431889 CCDC141Q6ZP82 1450 aa22.66■■□□□ 1.22
SMARCE1-205ENST00000431889 NCOA1Q15788 1441 aa22.66■■□□□ 1.22
SMARCE1-205ENST00000431889 NPATQ14207 1427 aa22.65■■□□□ 1.22
SMARCE1-205ENST00000431889 PTPRKQ15262 1439 aa22.65■■□□□ 1.22
SMARCE1-205ENST00000431889 LRRC9Q6ZRR7 1453 aa22.64■■□□□ 1.21
SMARCE1-205ENST00000431889 DHX29Q7Z478 1369 aaKnown RBP22.62■■□□□ 1.21
SMARCE1-205ENST00000431889 RTEL1-TNFRSF6BF6WH68 1400 aa22.62■■□□□ 1.21
SMARCE1-205ENST00000431889 PTPRTO14522 1441 aa22.62■■□□□ 1.21
SMARCE1-205ENST00000431889 FBXO31Q5XUX0 539 aaPredicted RBP22.62■■□□□ 1.21
SMARCE1-205ENST00000431889 CEP170BQ9Y4F5 1589 aaPredicted RBP22.6■■□□□ 1.21
SMARCE1-205ENST00000431889 ZNF142P52746 1687 aaPredicted RBP22.58■■□□□ 1.2
SMARCE1-205ENST00000431889 LTBP4Q8N2S1 1624 aa22.57■■□□□ 1.2
SMARCE1-205ENST00000431889 TSPY4P0CV99 314 aa22.55■■□□□ 1.2
SMARCE1-205ENST00000431889 TSPY10P0CW01 314 aa22.55■■□□□ 1.2
SMARCE1-205ENST00000431889 ZNF335Q9H4Z2 1342 aaPredicted RBP22.55■■□□□ 1.2
SMARCE1-205ENST00000431889 ARHGEF5Q12774 1597 aa22.54■■□□□ 1.2
SMARCE1-205ENST00000431889 WASHC2CQ9Y4E1 1318 aa22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms