RNA–Protein interactions for RNA: ENST00000431533.6

RPL28-204, Transcript of ribosomal protein L28, humanhuman

TSL 2 BASIC

Gene RPL28, Length 590 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-204ENST00000431533 HECW1Q76N89 1606 aa25.03■■□□□ 1.6
RPL28-204ENST00000431533 RIMS1Q86UR5 1692 aaKnown RBP25.03■■□□□ 1.6
RPL28-204ENST00000431533 SCAPERQ9BY12 1400 aa25.03■■□□□ 1.6
RPL28-204ENST00000431533 LMTK3Q96Q04 1460 aa24.98■■□□□ 1.59
RPL28-204ENST00000431533 YEATS2Q9ULM3 1422 aa24.98■■□□□ 1.59
RPL28-204ENST00000431533 PLPPR3Q6T4P5 718 aa24.96■■□□□ 1.59
RPL28-204ENST00000431533 MLECQ14165 292 aa24.95■■□□□ 1.58
RPL28-204ENST00000431533 MYO5CQ9NQX4 1742 aa24.95■■□□□ 1.58
RPL28-204ENST00000431533 CLIP1P30622 1438 aa24.95■■□□□ 1.58
RPL28-204ENST00000431533 ATP10AO60312 1499 aa24.93■■□□□ 1.58
RPL28-204ENST00000431533 KIF14Q15058 1648 aa24.91■■□□□ 1.58
RPL28-204ENST00000431533 C9orf84Q5VXU9 1444 aa24.91■■□□□ 1.58
RPL28-204ENST00000431533 TROQ12816 1431 aaPredicted RBP24.9■■□□□ 1.58
RPL28-204ENST00000431533 ZNF518AQ6AHZ1 1483 aa24.89■■□□□ 1.57
RPL28-204ENST00000431533 MYT1LQ9UL68 1186 aa24.88■■□□□ 1.57
RPL28-204ENST00000431533 FER1L4A9Z1Z3 1794 aa24.88■■□□□ 1.57
RPL28-204ENST00000431533 HSPA2P54652 639 aa24.87■■□□□ 1.57
RPL28-204ENST00000431533 ARHGAP5Q13017 1502 aa24.86■■□□□ 1.57
RPL28-204ENST00000431533 ARHGEF12Q9NZN5 1544 aa24.82■■□□□ 1.56
RPL28-204ENST00000431533 SIGLEC1Q9BZZ2 1709 aa24.82■■□□□ 1.56
RPL28-204ENST00000431533 LRRIQ1Q96JM4 1722 aa24.81■■□□□ 1.56
RPL28-204ENST00000431533 AFAP1Q8N556 730 aa24.8■■□□□ 1.56
RPL28-204ENST00000431533 CCDC18Q5T9S5 1454 aa24.79■■□□□ 1.56
RPL28-204ENST00000431533 KDM5CP41229 1560 aa24.77■■□□□ 1.56
RPL28-204ENST00000431533 ESF1Q9H501 851 aaKnown RBP24.77■■□□□ 1.56
RPL28-204ENST00000431533 DMRT2Q9Y5R5 561 aa24.75■■□□□ 1.55
RPL28-204ENST00000431533 CASKIN1Q8WXD9 1431 aa24.75■■□□□ 1.55
RPL28-204ENST00000431533 PREX1Q8TCU6 1659 aa24.73■■□□□ 1.55
RPL28-204ENST00000431533 MLH3Q9UHC1 1453 aa24.72■■□□□ 1.55
RPL28-204ENST00000431533 CERKQ8TCT0 537 aa24.72■■□□□ 1.55
RPL28-204ENST00000431533 REREQ9P2R6 1566 aa24.71■■□□□ 1.55
RPL28-204ENST00000431533 CEBPAP49715 358 aaPredicted RBP24.71■■□□□ 1.55
RPL28-204ENST00000431533 SETD1BQ9UPS6 1966 aaKnown RBP24.7■■□□□ 1.54
RPL28-204ENST00000431533 CDC42BPBQ9Y5S2 1711 aa24.69■■□□□ 1.54
RPL28-204ENST00000431533 UHRF1BP1Q6BDS2 1440 aa24.69■■□□□ 1.54
RPL28-204ENST00000431533 PREX2Q70Z35 1606 aa24.68■■□□□ 1.54
RPL28-204ENST00000431533 DIP2CQ9Y2E4 1556 aa24.68■■□□□ 1.54
RPL28-204ENST00000431533 FYCO1Q9BQS8 1478 aa24.66■■□□□ 1.54
RPL28-204ENST00000431533 CEP162Q5TB80 1403 aa24.65■■□□□ 1.54
RPL28-204ENST00000431533 ABCC1P33527 1531 aa24.65■■□□□ 1.54
RPL28-204ENST00000431533 AGLP35573 1532 aa24.65■■□□□ 1.54
RPL28-204ENST00000431533 LOC105371045A0A1W2PR82 267 aa24.63■■□□□ 1.53
RPL28-204ENST00000431533 TRAPPC8Q9Y2L5 1435 aa24.62■■□□□ 1.53
RPL28-204ENST00000431533 ABCA6Q8N139 1617 aa24.62■■□□□ 1.53
RPL28-204ENST00000431533 ITSN2Q9NZM3 1697 aa24.62■■□□□ 1.53
RPL28-204ENST00000431533 CNTLNQ9NXG0 1405 aa24.61■■□□□ 1.53
RPL28-204ENST00000431533 ZNF777Q9ULD5 760 aaPredicted RBP24.59■■□□□ 1.53
RPL28-204ENST00000431533 CDC42BPAQ5VT25 1732 aa24.57■■□□□ 1.52
RPL28-204ENST00000431533 SPAG9O60271 1321 aaKnown RBP24.55■■□□□ 1.52
RPL28-204ENST00000431533 C3P01024 1663 aa24.54■■□□□ 1.52
RPL28-204ENST00000431533 KIDINS220Q9ULH0 1771 aa24.54■■□□□ 1.52
RPL28-204ENST00000431533 PLEKHH2Q8IVE3 1493 aa24.52■■□□□ 1.52
RPL28-204ENST00000431533 PTPRTO14522 1441 aa24.52■■□□□ 1.52
RPL28-204ENST00000431533 CFDP1Q9UEE9 299 aaPredicted RBP24.51■■□□□ 1.51
RPL28-204ENST00000431533 STRCQ7RTU9 1775 aa24.51■■□□□ 1.51
RPL28-204ENST00000431533 GPATCH8Q9UKJ3 1502 aaKnown RBP24.51■■□□□ 1.51
RPL28-204ENST00000431533 SAMD9LQ8IVG5 1584 aa24.5■■□□□ 1.51
RPL28-204ENST00000431533 KIAA1107Q9UPP5 1409 aa24.5■■□□□ 1.51
RPL28-204ENST00000431533 CCNB3Q8WWL7 1395 aa24.49■■□□□ 1.51
RPL28-204ENST00000431533 HNRNPMP52272 730 aaKnown RBP eCLIP24.48■■□□□ 1.515e-6■■■■□ 20.3
RPL28-204ENST00000431533 SYCP2Q9BX26 1530 aa24.47■■□□□ 1.51
RPL28-204ENST00000431533 NPATQ14207 1427 aa24.46■■□□□ 1.51
RPL28-204ENST00000431533 MTUS2Q5JR59 1369 aa24.46■■□□□ 1.51
RPL28-204ENST00000431533 MROH2AA6NES4 1674 aa24.43■■□□□ 1.5
RPL28-204ENST00000431533 ZMYM3Q14202 1370 aa24.43■■□□□ 1.5
RPL28-204ENST00000431533 ATP7AQ04656 1500 aa24.42■■□□□ 1.5
RPL28-204ENST00000431533 PPP6R1Q9UPN7 881 aa24.41■■□□□ 1.5
RPL28-204ENST00000431533 A2MP01023 1474 aa24.39■■□□□ 1.5
RPL28-204ENST00000431533 SUPT6HQ7KZ85 1726 aaKnown RBP24.39■■□□□ 1.5
RPL28-204ENST00000431533 NCOA1Q15788 1441 aa24.39■■□□□ 1.5
RPL28-204ENST00000431533 EHBP1L1Q8N3D4 1523 aa24.36■■□□□ 1.49
RPL28-204ENST00000431533 GGT6Q6P531 493 aa24.36■■□□□ 1.49
RPL28-204ENST00000431533 INO80Q9ULG1 1556 aaPredicted RBP24.35■■□□□ 1.49
RPL28-204ENST00000431533 VPS8Q8N3P4 1428 aa24.35■■□□□ 1.49
RPL28-204ENST00000431533 IQSEC2Q5JU85 1478 aa24.34■■□□□ 1.49
RPL28-204ENST00000431533 PLXNC1O60486 1568 aa24.33■■□□□ 1.49
RPL28-204ENST00000431533 CAMSAP1Q5T5Y3 1602 aa24.33■■□□□ 1.49
RPL28-204ENST00000431533 PKD2Q13563 968 aa24.32■■□□□ 1.48
RPL28-204ENST00000431533 CLTCQ00610 1675 aaKnown RBP24.31■■□□□ 1.48
RPL28-204ENST00000431533 ADGBQ8N7X0 1667 aa24.31■■□□□ 1.48
RPL28-204ENST00000431533 TIAM1Q13009 1591 aa24.29■■□□□ 1.48
RPL28-204ENST00000431533 RTEL1-TNFRSF6BF6WH68 1400 aa24.29■■□□□ 1.48
RPL28-204ENST00000431533 DISP3Q9P2K9 1392 aa24.29■■□□□ 1.48
RPL28-204ENST00000431533 LTBP4Q8N2S1 1624 aa24.28■■□□□ 1.48
RPL28-204ENST00000431533 RSPH4AQ5TD94 716 aa24.28■■□□□ 1.48
RPL28-204ENST00000431533 PTPRKQ15262 1439 aa24.27■■□□□ 1.48
RPL28-204ENST00000431533 PLA2R1Q13018 1463 aa24.26■■□□□ 1.47
RPL28-204ENST00000431533 ZNF644Q9H582 1327 aaPredicted RBP24.25■■□□□ 1.47
RPL28-204ENST00000431533 NCKAP5LQ9HCH0 1330 aa24.25■■□□□ 1.47
RPL28-204ENST00000431533 DHX29Q7Z478 1369 aaKnown RBP24.24■■□□□ 1.47
RPL28-204ENST00000431533 MBD5Q9P267 1494 aa24.24■■□□□ 1.47
RPL28-204ENST00000431533 MYO3AQ8NEV4 1616 aa24.24■■□□□ 1.47
RPL28-204ENST00000431533 ZNF142P52746 1687 aaPredicted RBP24.24■■□□□ 1.47
RPL28-204ENST00000431533 CEP170BQ9Y4F5 1589 aaPredicted RBP24.23■■□□□ 1.47
RPL28-204ENST00000431533 NCOA2Q15596 1464 aa24.19■■□□□ 1.46
RPL28-204ENST00000431533 KIF3BO15066 747 aa24.18■■□□□ 1.46
RPL28-204ENST00000431533 CCDC141Q6ZP82 1450 aa24.18■■□□□ 1.46
RPL28-204ENST00000431533 A2ML1A8K2U0 1454 aa24.17■■□□□ 1.46
RPL28-204ENST00000431533 TCOF1Q13428 1488 aaKnown RBP24.17■■□□□ 1.46
RPL28-204ENST00000431533 LRRC9Q6ZRR7 1453 aa24.17■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms