RNA–Protein interactions for RNA: ENST00000430627.6

CDK12-201, Transcript of cyclin dependent kinase 12, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDK12, Length 5,918 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK12-201ENST00000430627 HDGFL2Q7Z4V5 671 aaPredicted RBP17.21■□□□□ 0.35
CDK12-201ENST00000430627 CCDC136Q96JN2 1154 aa17.2■□□□□ 0.34
CDK12-201ENST00000430627 TCEAL9Q9UHQ7 104 aa17.2■□□□□ 0.34
CDK12-201ENST00000430627 PAXIP1Q6ZW49 1069 aaPredicted RBP17.19■□□□□ 0.34
CDK12-201ENST00000430627 FRAT1Q92837 279 aaPredicted RBP17.19■□□□□ 0.34
CDK12-201ENST00000430627 CC2D1BQ5T0F9 858 aaKnown RBP17.18■□□□□ 0.34
CDK12-201ENST00000430627 PNNQ9H307 717 aaKnown RBP17.18■□□□□ 0.34
CDK12-201ENST00000430627 TRIM44Q96DX7 344 aaPredicted RBP17.17■□□□□ 0.34
CDK12-201ENST00000430627 PLCB2Q00722 1185 aa17.16■□□□□ 0.34
CDK12-201ENST00000430627 MARCH6O60337 910 aa17.16■□□□□ 0.34
CDK12-201ENST00000430627 RSF1Q96T23 1441 aaPredicted RBP17.16■□□□□ 0.34
CDK12-201ENST00000430627 APBB1O00213 710 aa17.15■□□□□ 0.34
CDK12-201ENST00000430627 CCAR1Q8IX12 1150 aaKnown RBP17.15■□□□□ 0.34
CDK12-201ENST00000430627 TOMM22Q9NS69 142 aa17.14■□□□□ 0.34
CDK12-201ENST00000430627 AMPHP49418 695 aa17.12■□□□□ 0.33
CDK12-201ENST00000430627 ANP32EQ9BTT0 268 aa17.11■□□□□ 0.33
CDK12-201ENST00000430627 PTMAP06454 111 aaKnown RBP17.1■□□□□ 0.33
CDK12-201ENST00000430627 ATF3P18847 181 aa17.09■□□□□ 0.33
CDK12-201ENST00000430627 MORC1Q86VD1 984 aa17.09■□□□□ 0.33
CDK12-201ENST00000430627 CCNB3Q8WWL7 1395 aa17.08■□□□□ 0.32
CDK12-201ENST00000430627 RASSF8Q8NHQ8 419 aa17.08■□□□□ 0.32
CDK12-201ENST00000430627 OSCARQ8IYS5 282 aa17.07■□□□□ 0.32
CDK12-201ENST00000430627 NOL10Q9BSC4 688 aaKnown RBP17.07■□□□□ 0.32
CDK12-201ENST00000430627 CCDC180Q9P1Z9 1646 aa17.07■□□□□ 0.32
CDK12-201ENST00000430627 GOLGA6L22H0YM25 854 aa17.06■□□□□ 0.32
CDK12-201ENST00000430627 NGEFQ8N5V2 710 aa17.06■□□□□ 0.32
CDK12-201ENST00000430627 IRX6P78412 446 aaPredicted RBP17.06■□□□□ 0.32
CDK12-201ENST00000430627 NACADO15069 1562 aa17.05■□□□□ 0.32
CDK12-201ENST00000430627 WASHC2CQ9Y4E1 1318 aa17.05■□□□□ 0.32
CDK12-201ENST00000430627 KIAA2012Q0VF49 1180 aa17.05■□□□□ 0.32
CDK12-201ENST00000430627 EIF5BO60841 1220 aaKnown RBP17.05■□□□□ 0.32
CDK12-201ENST00000430627 FAM69CQ0P6D2 419 aa17.05■□□□□ 0.32
CDK12-201ENST00000430627 GOLGA6L6A8MZA4 724 aa17.04■□□□□ 0.32
CDK12-201ENST00000430627 CLIP1P30622 1438 aa17.04■□□□□ 0.32
CDK12-201ENST00000430627 GOLGA6L4A6NEF3 574 aa17.03■□□□□ 0.32
CDK12-201ENST00000430627 BAZ1BQ9UIG0 1483 aaKnown RBP17.03■□□□□ 0.32
CDK12-201ENST00000430627 ZCCHC6Q5VYS8 1495 aaKnown RBP17.03■□□□□ 0.32
CDK12-201ENST00000430627 DCAF11Q8TEB1 546 aa17.02■□□□□ 0.31
CDK12-201ENST00000430627 KIF3BO15066 747 aa17.02■□□□□ 0.31
CDK12-201ENST00000430627 RBM33Q96EV2 1170 aaKnown RBP17.01■□□□□ 0.31
CDK12-201ENST00000430627 USP35Q9P2H5 1018 aa17.01■□□□□ 0.31
CDK12-201ENST00000430627 ACIN1Q9UKV3 1341 aaKnown RBP17.01■□□□□ 0.31
CDK12-201ENST00000430627 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17■□□□□ 0.31
CDK12-201ENST00000430627 NOC3LQ8WTT2 800 aaKnown RBP17■□□□□ 0.31
CDK12-201ENST00000430627 SPAG9O60271 1321 aaKnown RBP16.99■□□□□ 0.31
CDK12-201ENST00000430627 PSME1Q06323 249 aa16.99■□□□□ 0.31
CDK12-201ENST00000430627 C1orf141Q5JVX7 400 aa16.99■□□□□ 0.31
CDK12-201ENST00000430627 ERICH6BQ5W0A0 696 aa16.98■□□□□ 0.31
CDK12-201ENST00000430627 VPS37DQ86XT2 251 aa16.98■□□□□ 0.31
CDK12-201ENST00000430627 CREBRFQ8IUR6 639 aa16.97■□□□□ 0.31
CDK12-201ENST00000430627 BECN1Q14457 450 aa16.97■□□□□ 0.31
CDK12-201ENST00000430627 AMOTL1Q8IY63 956 aa16.97■□□□□ 0.31
CDK12-201ENST00000430627 CECR2Q9BXF3 1484 aa16.96■□□□□ 0.31
CDK12-201ENST00000430627 CHMP4BQ9H444 224 aaKnown RBP16.96■□□□□ 0.31
CDK12-201ENST00000430627 HSP90B1P14625 803 aaKnown RBP16.96■□□□□ 0.31
CDK12-201ENST00000430627 CHAF1AQ13111 956 aaPredicted RBP16.96■□□□□ 0.31
CDK12-201ENST00000430627 DNTTIP2Q5QJE6 756 aaKnown RBP16.95■□□□□ 0.3
CDK12-201ENST00000430627 TMF1P82094 1093 aa16.95■□□□□ 0.3
CDK12-201ENST00000430627 TTC5Q8N0Z6 440 aa16.94■□□□□ 0.3
CDK12-201ENST00000430627 DDRGK1Q96HY6 314 aa16.94■□□□□ 0.3
CDK12-201ENST00000430627 DHX16O60231 1041 aaKnown RBP16.94■□□□□ 0.3
CDK12-201ENST00000430627 EFCAB2Q5VUJ9 269 aa16.94■□□□□ 0.3
CDK12-201ENST00000430627 CARMIL2Q6F5E8 1435 aa16.94■□□□□ 0.3
CDK12-201ENST00000430627 STK31Q9BXU1 1019 aa16.93■□□□□ 0.3
CDK12-201ENST00000430627 SLC4A3P48751 1232 aa16.93■□□□□ 0.3
CDK12-201ENST00000430627 WDR70Q9NW82 654 aa16.93■□□□□ 0.3
CDK12-201ENST00000430627 KIAA1211Q6ZU35 1233 aa16.92■□□□□ 0.3
CDK12-201ENST00000430627 MCCP23508 829 aa16.91■□□□□ 0.3
CDK12-201ENST00000430627 CEP89Q96ST8 783 aa16.91■□□□□ 0.3
CDK12-201ENST00000430627 IBSPP21815 317 aaPredicted RBP16.9■□□□□ 0.3
CDK12-201ENST00000430627 SLC4A10Q6U841 1118 aa16.89■□□□□ 0.29
CDK12-201ENST00000430627 PDS5BQ9NTI5 1447 aa16.89■□□□□ 0.29
CDK12-201ENST00000430627 HSP90AB1P08238 724 aaKnown RBP16.89■□□□□ 0.29
CDK12-201ENST00000430627 WASHC2AQ641Q2 1341 aa16.88■□□□□ 0.29
CDK12-201ENST00000430627 STRN4Q9NRL3 753 aa16.88■□□□□ 0.29
CDK12-201ENST00000430627 GRM1Q13255 1194 aa16.88■□□□□ 0.29
CDK12-201ENST00000430627 L1TD1Q5T7N2 865 aaKnown RBP16.87■□□□□ 0.29
CDK12-201ENST00000430627 FAM177BA6PVY3 158 aa16.86■□□□□ 0.29
CDK12-201ENST00000430627 PAF1Q8N7H5 531 aa16.86■□□□□ 0.29
CDK12-201ENST00000430627 CCDC43Q96MW1 224 aaKnown RBP16.86■□□□□ 0.29
CDK12-201ENST00000430627 GPATCH3Q96I76 525 aa16.86■□□□□ 0.29
CDK12-201ENST00000430627 PPM1FP49593 454 aaPredicted RBP16.85■□□□□ 0.29
CDK12-201ENST00000430627 RGS3P49796 1198 aa16.85■□□□□ 0.29
CDK12-201ENST00000430627 NRDCO43847 1150 aa16.85■□□□□ 0.29
CDK12-201ENST00000430627 U2AF1L5P0DN76 240 aaPredicted RBP16.84■□□□□ 0.29
CDK12-201ENST00000430627 U2AF1Q01081 240 aaKnown RBP eCLIP16.84■□□□□ 0.29
CDK12-201ENST00000430627 TMEM132AQ24JP5 1023 aa16.83■□□□□ 0.29
CDK12-201ENST00000430627 MYCNP04198 464 aaPredicted RBP16.83■□□□□ 0.28
CDK12-201ENST00000430627 SPDYE4A6NLX3 237 aa16.83■□□□□ 0.28
CDK12-201ENST00000430627 MS4A1P11836 297 aa16.83■□□□□ 0.28
CDK12-201ENST00000430627 DRC7Q8IY82 874 aa16.82■□□□□ 0.28
CDK12-201ENST00000430627 VSIG10Q8N0Z9 540 aa16.82■□□□□ 0.28
CDK12-201ENST00000430627 FYB1O15117 783 aa16.8■□□□□ 0.28
CDK12-201ENST00000430627 C16orf71Q8IYS4 520 aaPredicted RBP16.8■□□□□ 0.28
CDK12-201ENST00000430627 A0A0U1RQG5 324 aaPredicted RBP16.8■□□□□ 0.28
CDK12-201ENST00000430627 IKQ13123 557 aaPredicted RBP16.8■□□□□ 0.28
CDK12-201ENST00000430627 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.79■□□□□ 0.283e-7■■■■■ 55.5
CDK12-201ENST00000430627 TERF2IPQ9NYB0 399 aa16.78■□□□□ 0.28
CDK12-201ENST00000430627 PROSER2Q86WR7 435 aaPredicted RBP16.78■□□□□ 0.28
CDK12-201ENST00000430627 NUTM2GQ5VZR2 741 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms