RNA–Protein interactions for RNA: ENST00000429629.6

GARNL3-204, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 694 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-204ENST00000429629 SUPT6HQ7KZ85 1726 aaKnown RBP23.22■■□□□ 1.31
GARNL3-204ENST00000429629 ARHGAP5Q13017 1502 aa23.21■■□□□ 1.31
GARNL3-204ENST00000429629 CFAP74Q9C0B2 1584 aa23.21■■□□□ 1.31
GARNL3-204ENST00000429629 KIAA1107Q9UPP5 1409 aa23.19■■□□□ 1.3
GARNL3-204ENST00000429629 MIA2Q96PC5 1412 aa23.18■■□□□ 1.3
GARNL3-204ENST00000429629 MYO5CQ9NQX4 1742 aa23.18■■□□□ 1.3
GARNL3-204ENST00000429629 DENND4BO75064 1496 aaPredicted RBP23.17■■□□□ 1.3
GARNL3-204ENST00000429629 SCAPERQ9BY12 1400 aa23.17■■□□□ 1.3
GARNL3-204ENST00000429629 PREX2Q70Z35 1606 aa23.17■■□□□ 1.3
GARNL3-204ENST00000429629 ADGRL1O94910 1474 aa23.17■■□□□ 1.3
GARNL3-204ENST00000429629 PLEKHH2Q8IVE3 1493 aa23.17■■□□□ 1.3
GARNL3-204ENST00000429629 KDM6BO15054 1643 aa23.16■■□□□ 1.3
GARNL3-204ENST00000429629 RSPH4AQ5TD94 716 aa23.16■■□□□ 1.3
GARNL3-204ENST00000429629 MYOM3Q5VTT5 1437 aa23.16■■□□□ 1.3
GARNL3-204ENST00000429629 RAPGEF3O95398 923 aa23.14■■□□□ 1.29
GARNL3-204ENST00000429629 ZNF777Q9ULD5 760 aaPredicted RBP23.13■■□□□ 1.29
GARNL3-204ENST00000429629 CDC42BPBQ9Y5S2 1711 aa23.12■■□□□ 1.29
GARNL3-204ENST00000429629 CDC42BPAQ5VT25 1732 aa23.11■■□□□ 1.29
GARNL3-204ENST00000429629 POGZQ7Z3K3 1410 aa23.09■■□□□ 1.29
GARNL3-204ENST00000429629 ZNF644Q9H582 1327 aaPredicted RBP23.08■■□□□ 1.29
GARNL3-204ENST00000429629 ITSN2Q9NZM3 1697 aa23.08■■□□□ 1.29
GARNL3-204ENST00000429629 ZNF518AQ6AHZ1 1483 aa23.07■■□□□ 1.28
GARNL3-204ENST00000429629 MAGI2Q86UL8 1455 aa23.07■■□□□ 1.28
GARNL3-204ENST00000429629 AFAP1Q8N556 730 aa23.07■■□□□ 1.28
GARNL3-204ENST00000429629 ABCC1P33527 1531 aa23.07■■□□□ 1.28
GARNL3-204ENST00000429629 HNRNPMP52272 730 aaKnown RBP eCLIP23.06■■□□□ 1.28
GARNL3-204ENST00000429629 ARHGEF12Q9NZN5 1544 aa23.06■■□□□ 1.28
GARNL3-204ENST00000429629 MBD5Q9P267 1494 aa23.05■■□□□ 1.28
GARNL3-204ENST00000429629 FGD6Q6ZV73 1430 aa23.04■■□□□ 1.28
GARNL3-204ENST00000429629 SAMD9LQ8IVG5 1584 aa23.04■■□□□ 1.28
GARNL3-204ENST00000429629 TRAPPC8Q9Y2L5 1435 aa23.03■■□□□ 1.28
GARNL3-204ENST00000429629 MLH3Q9UHC1 1453 aa23.01■■□□□ 1.27
GARNL3-204ENST00000429629 ZMYM4Q5VZL5 1548 aa23.01■■□□□ 1.27
GARNL3-204ENST00000429629 CAMSAP2Q08AD1 1489 aa22.99■■□□□ 1.27
GARNL3-204ENST00000429629 TCOF1Q13428 1488 aaKnown RBP22.99■■□□□ 1.27
GARNL3-204ENST00000429629 FRMPD1Q5SYB0 1578 aa22.99■■□□□ 1.27
GARNL3-204ENST00000429629 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.99■■□□□ 1.27
GARNL3-204ENST00000429629 KDM5CP41229 1560 aa22.98■■□□□ 1.27
GARNL3-204ENST00000429629 PPARGC1BQ86YN6 1023 aaKnown RBP22.98■■□□□ 1.27
GARNL3-204ENST00000429629 SYCP2Q9BX26 1530 aa22.98■■□□□ 1.27
GARNL3-204ENST00000429629 TSPY4P0CV99 314 aa22.97■■□□□ 1.27
GARNL3-204ENST00000429629 TSPY10P0CW01 314 aa22.97■■□□□ 1.27
GARNL3-204ENST00000429629 SPAG9O60271 1321 aaKnown RBP22.97■■□□□ 1.27
GARNL3-204ENST00000429629 RTEL1-TNFRSF6BF6WH68 1400 aa22.96■■□□□ 1.27
GARNL3-204ENST00000429629 RICTORQ6R327 1708 aa22.96■■□□□ 1.27
GARNL3-204ENST00000429629 CCDC141Q6ZP82 1450 aa22.94■■□□□ 1.26
GARNL3-204ENST00000429629 ARHGEF5Q12774 1597 aa22.93■■□□□ 1.26
GARNL3-204ENST00000429629 PTPN23Q9H3S7 1636 aa22.9■■□□□ 1.26
GARNL3-204ENST00000429629 RRBP1Q9P2E9 1410 aaKnown RBP22.9■■□□□ 1.26
GARNL3-204ENST00000429629 ATP10AO60312 1499 aa22.89■■□□□ 1.25
GARNL3-204ENST00000429629 ZFYVE16Q7Z3T8 1539 aa22.88■■□□□ 1.25
GARNL3-204ENST00000429629 YEATS2Q9ULM3 1422 aa22.88■■□□□ 1.25
GARNL3-204ENST00000429629 FAM50AQ14320 339 aaKnown RBP22.87■■□□□ 1.25
GARNL3-204ENST00000429629 MYT1LQ9UL68 1186 aa22.87■■□□□ 1.25
GARNL3-204ENST00000429629 ABCC5O15440 1437 aa22.87■■□□□ 1.25
GARNL3-204ENST00000429629 HECW2Q9P2P5 1572 aa22.84■■□□□ 1.25
GARNL3-204ENST00000429629 ARHGEF40Q8TER5 1519 aa22.84■■□□□ 1.25
GARNL3-204ENST00000429629 DAPK1P53355 1430 aa22.83■■□□□ 1.25
GARNL3-204ENST00000429629 SHANK2Q9UPX8 1470 aa22.83■■□□□ 1.25
GARNL3-204ENST00000429629 C9orf84Q5VXU9 1444 aa22.82■■□□□ 1.24
GARNL3-204ENST00000429629 ATP7AQ04656 1500 aa22.81■■□□□ 1.24
GARNL3-204ENST00000429629 REREQ9P2R6 1566 aa22.8■■□□□ 1.24
GARNL3-204ENST00000429629 MAST1Q9Y2H9 1570 aa22.8■■□□□ 1.24
GARNL3-204ENST00000429629 INO80Q9ULG1 1556 aaPredicted RBP22.79■■□□□ 1.24
GARNL3-204ENST00000429629 DHX29Q7Z478 1369 aaKnown RBP22.78■■□□□ 1.24
GARNL3-204ENST00000429629 KIDINS220Q9ULH0 1771 aa22.78■■□□□ 1.24
GARNL3-204ENST00000429629 DNMT1P26358 1616 aaKnown RBP22.77■■□□□ 1.24
GARNL3-204ENST00000429629 DIP2CQ9Y2E4 1556 aa22.76■■□□□ 1.23
GARNL3-204ENST00000429629 AGLP35573 1532 aa22.76■■□□□ 1.23
GARNL3-204ENST00000429629 ANKRD30AQ9BXX3 1397 aa22.75■■□□□ 1.23
GARNL3-204ENST00000429629 A2MP01023 1474 aa22.74■■□□□ 1.23
GARNL3-204ENST00000429629 ARID4BQ4LE39 1312 aaPredicted RBP22.74■■□□□ 1.23
GARNL3-204ENST00000429629 ROCK1Q13464 1354 aa22.74■■□□□ 1.23
GARNL3-204ENST00000429629 NCOA1Q15788 1441 aa22.74■■□□□ 1.23
GARNL3-204ENST00000429629 PPP6R1Q9UPN7 881 aa22.73■■□□□ 1.23
GARNL3-204ENST00000429629 ADGRL2O95490 1459 aa22.73■■□□□ 1.23
GARNL3-204ENST00000429629 ABCA6Q8N139 1617 aa22.71■■□□□ 1.23
GARNL3-204ENST00000429629 PTPRKQ15262 1439 aa22.7■■□□□ 1.22
GARNL3-204ENST00000429629 CHIC2Q9UKJ5 165 aa22.69■■□□□ 1.22
GARNL3-204ENST00000429629 KIF15Q9NS87 1388 aa22.68■■□□□ 1.22
GARNL3-204ENST00000429629 RRP7BPQ9NSQ0 103 aa22.68■■□□□ 1.22
GARNL3-204ENST00000429629 PLXNC1O60486 1568 aa22.67■■□□□ 1.22
GARNL3-204ENST00000429629 KDM4FA0A1W2PPD8 638 aa22.66■■□□□ 1.22
GARNL3-204ENST00000429629 DUOX2Q9NRD8 1548 aa22.66■■□□□ 1.22
GARNL3-204ENST00000429629 ADGBQ8N7X0 1667 aa22.64■■□□□ 1.21
GARNL3-204ENST00000429629 ERBINQ96RT1 1412 aa22.63■■□□□ 1.21
GARNL3-204ENST00000429629 CROCC2H7BZ55 1655 aa22.62■■□□□ 1.21
GARNL3-204ENST00000429629 KIF3BO15066 747 aa22.62■■□□□ 1.21
GARNL3-204ENST00000429629 ITGAEP38570 1179 aa22.62■■□□□ 1.21
GARNL3-204ENST00000429629 MLECQ14165 292 aa22.58■■□□□ 1.21
GARNL3-204ENST00000429629 ANKRD50Q9ULJ7 1429 aa22.57■■□□□ 1.2
GARNL3-204ENST00000429629 GGT6Q6P531 493 aa22.57■■□□□ 1.2
GARNL3-204ENST00000429629 BCORL1Q5H9F3 1711 aa22.56■■□□□ 1.2
GARNL3-204ENST00000429629 SIGLEC1Q9BZZ2 1709 aa22.55■■□□□ 1.2
GARNL3-204ENST00000429629 ESF1Q9H501 851 aaKnown RBP22.55■■□□□ 1.2
GARNL3-204ENST00000429629 CNTLNQ9NXG0 1405 aa22.55■■□□□ 1.2
GARNL3-204ENST00000429629 ADAMTSL3P82987 1691 aa22.54■■□□□ 1.2
GARNL3-204ENST00000429629 FAM135AQ9P2D6 1515 aa22.52■■□□□ 1.2
GARNL3-204ENST00000429629 EIF2AK4Q9P2K8 1649 aaKnown RBP22.52■■□□□ 1.2
GARNL3-204ENST00000429629 ACIN1Q9UKV3 1341 aaKnown RBP22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms