RNA–Protein interactions for RNA: ENST00000427710.5

RTN4-210, Transcript of reticulon 4, humanhuman

TSL 4

Gene RTN4, Length 589 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-210ENST00000427710 EFCAB2Q5VUJ9 269 aa23.73■■□□□ 1.39
RTN4-210ENST00000427710 PREX2Q70Z35 1606 aa23.73■■□□□ 1.39
RTN4-210ENST00000427710 SCAPERQ9BY12 1400 aa23.71■■□□□ 1.39
RTN4-210ENST00000427710 MTUS2Q5JR59 1369 aa23.69■■□□□ 1.38
RTN4-210ENST00000427710 VPS8Q8N3P4 1428 aa23.68■■□□□ 1.38
RTN4-210ENST00000427710 POGZQ7Z3K3 1410 aa23.64■■□□□ 1.37
RTN4-210ENST00000427710 EHBP1L1Q8N3D4 1523 aa23.64■■□□□ 1.37
RTN4-210ENST00000427710 TIAM1Q13009 1591 aa23.62■■□□□ 1.37
RTN4-210ENST00000427710 ZMYM4Q5VZL5 1548 aa23.62■■□□□ 1.37
RTN4-210ENST00000427710 ARHGEF40Q8TER5 1519 aa23.62■■□□□ 1.37
RTN4-210ENST00000427710 GPATCH8Q9UKJ3 1502 aaKnown RBP23.62■■□□□ 1.37
RTN4-210ENST00000427710 YEATS2Q9ULM3 1422 aa23.61■■□□□ 1.37
RTN4-210ENST00000427710 ZNF777Q9ULD5 760 aaPredicted RBP23.61■■□□□ 1.37
RTN4-210ENST00000427710 ITSN2Q9NZM3 1697 aa23.6■■□□□ 1.37
RTN4-210ENST00000427710 ARHGEF12Q9NZN5 1544 aa23.59■■□□□ 1.37
RTN4-210ENST00000427710 ABCC1P33527 1531 aa23.59■■□□□ 1.37
RTN4-210ENST00000427710 ZFYVE16Q7Z3T8 1539 aa23.59■■□□□ 1.37
RTN4-210ENST00000427710 SAMD9LQ8IVG5 1584 aa23.58■■□□□ 1.37
RTN4-210ENST00000427710 CCNB3Q8WWL7 1395 aa23.58■■□□□ 1.37
RTN4-210ENST00000427710 AFAP1Q8N556 730 aa23.58■■□□□ 1.37
RTN4-210ENST00000427710 SIGLEC1Q9BZZ2 1709 aa23.58■■□□□ 1.37
RTN4-210ENST00000427710 ARID4BQ4LE39 1312 aaPredicted RBP23.56■■□□□ 1.36
RTN4-210ENST00000427710 SUPT6HQ7KZ85 1726 aaKnown RBP23.56■■□□□ 1.36
RTN4-210ENST00000427710 TRAPPC8Q9Y2L5 1435 aa23.55■■□□□ 1.36
RTN4-210ENST00000427710 ZNF518AQ6AHZ1 1483 aa23.54■■□□□ 1.36
RTN4-210ENST00000427710 CFDP1Q9UEE9 299 aaPredicted RBP23.53■■□□□ 1.36
RTN4-210ENST00000427710 MYT1LQ9UL68 1186 aa23.53■■□□□ 1.36
RTN4-210ENST00000427710 KDM5CP41229 1560 aa23.52■■□□□ 1.36
RTN4-210ENST00000427710 BCORL1Q5H9F3 1711 aa23.52■■□□□ 1.36
RTN4-210ENST00000427710 SYCP2Q9BX26 1530 aa23.52■■□□□ 1.36
RTN4-210ENST00000427710 NCOA2Q15596 1464 aa23.51■■□□□ 1.35
RTN4-210ENST00000427710 MAGI2Q86UL8 1455 aa23.51■■□□□ 1.35
RTN4-210ENST00000427710 KANK4Q5T7N3 995 aaPredicted RBP23.51■■□□□ 1.35
RTN4-210ENST00000427710 LRRC9Q6ZRR7 1453 aa23.5■■□□□ 1.35
RTN4-210ENST00000427710 HECW2Q9P2P5 1572 aa23.5■■□□□ 1.35
RTN4-210ENST00000427710 HNRNPMP52272 730 aaKnown RBP eCLIP23.5■■□□□ 1.354e-7■■■■□ 20.8
RTN4-210ENST00000427710 ADAMTSL3P82987 1691 aa23.49■■□□□ 1.35
RTN4-210ENST00000427710 ZNF644Q9H582 1327 aaPredicted RBP23.48■■□□□ 1.35
RTN4-210ENST00000427710 ABCA6Q8N139 1617 aa23.46■■□□□ 1.35
RTN4-210ENST00000427710 KIDINS220Q9ULH0 1771 aa23.45■■□□□ 1.34
RTN4-210ENST00000427710 MADDQ8WXG6 1647 aa23.45■■□□□ 1.34
RTN4-210ENST00000427710 MAP3K1Q13233 1512 aa23.45■■□□□ 1.34
RTN4-210ENST00000427710 ATP10AO60312 1499 aa23.45■■□□□ 1.34
RTN4-210ENST00000427710 DIP2CQ9Y2E4 1556 aa23.44■■□□□ 1.34
RTN4-210ENST00000427710 MLECQ14165 292 aa23.44■■□□□ 1.34
RTN4-210ENST00000427710 MLH3Q9UHC1 1453 aa23.42■■□□□ 1.34
RTN4-210ENST00000427710 C9orf84Q5VXU9 1444 aa23.42■■□□□ 1.34
RTN4-210ENST00000427710 RIMS1Q86UR5 1692 aaKnown RBP23.41■■□□□ 1.34
RTN4-210ENST00000427710 APLP2Q06481 763 aa23.4■■□□□ 1.34
RTN4-210ENST00000427710 PLEKHH2Q8IVE3 1493 aa23.4■■□□□ 1.34
RTN4-210ENST00000427710 KIAA1107Q9UPP5 1409 aa23.39■■□□□ 1.33
RTN4-210ENST00000427710 FER1L4A9Z1Z3 1794 aa23.37■■□□□ 1.33
RTN4-210ENST00000427710 CAMSAP2Q08AD1 1489 aa23.36■■□□□ 1.33
RTN4-210ENST00000427710 SPAG9O60271 1321 aaKnown RBP23.36■■□□□ 1.33
RTN4-210ENST00000427710 PTPRMP28827 1452 aa23.36■■□□□ 1.33
RTN4-210ENST00000427710 PLPPR3Q6T4P5 718 aa23.34■■□□□ 1.33
RTN4-210ENST00000427710 MBD5Q9P267 1494 aa23.34■■□□□ 1.33
RTN4-210ENST00000427710 ATP7AQ04656 1500 aa23.33■■□□□ 1.33
RTN4-210ENST00000427710 INO80Q9ULG1 1556 aaPredicted RBP23.33■■□□□ 1.33
RTN4-210ENST00000427710 REREQ9P2R6 1566 aa23.31■■□□□ 1.32
RTN4-210ENST00000427710 MYOM3Q5VTT5 1437 aa23.28■■□□□ 1.32
RTN4-210ENST00000427710 CCDC141Q6ZP82 1450 aa23.25■■□□□ 1.31
RTN4-210ENST00000427710 AGLP35573 1532 aa23.23■■□□□ 1.31
RTN4-210ENST00000427710 ADGBQ8N7X0 1667 aa23.23■■□□□ 1.31
RTN4-210ENST00000427710 ARHGEF5Q12774 1597 aa23.23■■□□□ 1.31
RTN4-210ENST00000427710 A2MP01023 1474 aa23.22■■□□□ 1.31
RTN4-210ENST00000427710 PTPN23Q9H3S7 1636 aa23.2■■□□□ 1.3
RTN4-210ENST00000427710 MIA2Q96PC5 1412 aa23.2■■□□□ 1.3
RTN4-210ENST00000427710 PLXNC1O60486 1568 aa23.19■■□□□ 1.3
RTN4-210ENST00000427710 CEBPAP49715 358 aaPredicted RBP23.18■■□□□ 1.3
RTN4-210ENST00000427710 RTEL1-TNFRSF6BF6WH68 1400 aa23.17■■□□□ 1.3
RTN4-210ENST00000427710 PPARGC1BQ86YN6 1023 aaKnown RBP23.17■■□□□ 1.3
RTN4-210ENST00000427710 RSPH4AQ5TD94 716 aa23.16■■□□□ 1.3
RTN4-210ENST00000427710 TSPY4P0CV99 314 aa23.14■■□□□ 1.29
RTN4-210ENST00000427710 TSPY10P0CW01 314 aa23.14■■□□□ 1.29
RTN4-210ENST00000427710 FGD6Q6ZV73 1430 aa23.14■■□□□ 1.29
RTN4-210ENST00000427710 C3P01024 1663 aa23.13■■□□□ 1.29
RTN4-210ENST00000427710 GGT6Q6P531 493 aa23.11■■□□□ 1.29
RTN4-210ENST00000427710 ESF1Q9H501 851 aaKnown RBP23.11■■□□□ 1.29
RTN4-210ENST00000427710 CLTCQ00610 1675 aaKnown RBP23.11■■□□□ 1.29
RTN4-210ENST00000427710 MAST1Q9Y2H9 1570 aa23.1■■□□□ 1.29
RTN4-210ENST00000427710 CROCC2H7BZ55 1655 aa23.1■■□□□ 1.29
RTN4-210ENST00000427710 DHX29Q7Z478 1369 aaKnown RBP23.1■■□□□ 1.29
RTN4-210ENST00000427710 TCOF1Q13428 1488 aaKnown RBP23.08■■□□□ 1.29
RTN4-210ENST00000427710 SETD1BQ9UPS6 1966 aaKnown RBP23.08■■□□□ 1.29
RTN4-210ENST00000427710 ABCC5O15440 1437 aa23.07■■□□□ 1.28
RTN4-210ENST00000427710 LMTK3Q96Q04 1460 aa23.06■■□□□ 1.28
RTN4-210ENST00000427710 KIF3BO15066 747 aa23.06■■□□□ 1.28
RTN4-210ENST00000427710 DNMT1P26358 1616 aaKnown RBP23.05■■□□□ 1.28
RTN4-210ENST00000427710 MROH2AA6NES4 1674 aa23.03■■□□□ 1.28
RTN4-210ENST00000427710 DAPK1P53355 1430 aa23.03■■□□□ 1.28
RTN4-210ENST00000427710 FAM50AQ14320 339 aaKnown RBP23.03■■□□□ 1.28
RTN4-210ENST00000427710 PREX1Q8TCU6 1659 aa23.03■■□□□ 1.28
RTN4-210ENST00000427710 CNTLNQ9NXG0 1405 aa23.02■■□□□ 1.28
RTN4-210ENST00000427710 HSPA2P54652 639 aa23.02■■□□□ 1.28
RTN4-210ENST00000427710 CHIC2Q9UKJ5 165 aa23.01■■□□□ 1.27
RTN4-210ENST00000427710 ZMYM3Q14202 1370 aa22.99■■□□□ 1.27
RTN4-210ENST00000427710 SHANK2Q9UPX8 1470 aa22.98■■□□□ 1.27
RTN4-210ENST00000427710 RRP7BPQ9NSQ0 103 aa22.98■■□□□ 1.27
RTN4-210ENST00000427710 CFAP65Q6ZU64 1925 aaKnown RBP22.95■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms