RNA–Protein interactions for RNA: ENST00000427635.6

HERC4-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 6,391 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-206ENST00000427635 ZNF330Q9Y3S2 320 aaPredicted RBP7.38□□□□□ -1.23
HERC4-206ENST00000427635 GNL2Q13823 731 aaKnown RBP7.38□□□□□ -1.23
HERC4-206ENST00000427635 PTMAP06454 111 aaKnown RBP7.37□□□□□ -1.23
HERC4-206ENST00000427635 AEBP1Q8IUX7 1158 aa7.37□□□□□ -1.23
HERC4-206ENST00000427635 RAD21O60216 631 aa7.37□□□□□ -1.23
HERC4-206ENST00000427635 NRDCO43847 1150 aa7.37□□□□□ -1.23
HERC4-206ENST00000427635 SOX12O15370 315 aa7.36□□□□□ -1.23
HERC4-206ENST00000427635 CFDP1Q9UEE9 299 aaPredicted RBP7.36□□□□□ -1.23
HERC4-206ENST00000427635 EID1Q9Y6B2 187 aa7.36□□□□□ -1.23
HERC4-206ENST00000427635 CHAF1AQ13111 956 aaPredicted RBP7.36□□□□□ -1.23
HERC4-206ENST00000427635 CTDP1Q9Y5B0 961 aaPredicted RBP7.35□□□□□ -1.23
HERC4-206ENST00000427635 SRPK2P78362 688 aaKnown RBP7.35□□□□□ -1.23
HERC4-206ENST00000427635 MRS2Q9HD23 443 aa7.35□□□□□ -1.23
HERC4-206ENST00000427635 MS4A1P11836 297 aa7.34□□□□□ -1.23
HERC4-206ENST00000427635 RRP7BPQ9NSQ0 103 aa7.34□□□□□ -1.23
HERC4-206ENST00000427635 U2SURPO15042 1029 aaKnown RBP7.34□□□□□ -1.23
HERC4-206ENST00000427635 DDRGK1Q96HY6 314 aa7.34□□□□□ -1.23
HERC4-206ENST00000427635 RB1CC1Q8TDY2 1594 aa7.34□□□□□ -1.23
HERC4-206ENST00000427635 IGSF3O75054 1194 aa7.34□□□□□ -1.24
HERC4-206ENST00000427635 GTF2E1P29083 439 aaPredicted RBP7.34□□□□□ -1.24
HERC4-206ENST00000427635 KCTD17Q8N5Z5 321 aa7.33□□□□□ -1.24
HERC4-206ENST00000427635 TRIM34Q9BYJ4 488 aa7.33□□□□□ -1.24
HERC4-206ENST00000427635 HDGFL2Q7Z4V5 671 aaPredicted RBP7.32□□□□□ -1.24
HERC4-206ENST00000427635 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.32□□□□□ -1.24
HERC4-206ENST00000427635 MCCP23508 829 aa7.32□□□□□ -1.24
HERC4-206ENST00000427635 EVA1CP58658 441 aa7.32□□□□□ -1.24
HERC4-206ENST00000427635 GOLGA6L4A6NEF3 574 aa7.32□□□□□ -1.24
HERC4-206ENST00000427635 GORABQ5T7V8 394 aa7.32□□□□□ -1.24
HERC4-206ENST00000427635 ZNF592Q92610 1267 aa7.32□□□□□ -1.24
HERC4-206ENST00000427635 VPS53Q5VIR6 699 aa7.32□□□□□ -1.24
HERC4-206ENST00000427635 CLIP1P30622 1438 aa7.32□□□□□ -1.24
HERC4-206ENST00000427635 DNTTIP2Q5QJE6 756 aaKnown RBP7.31□□□□□ -1.24
HERC4-206ENST00000427635 NOC3LQ8WTT2 800 aaKnown RBP7.31□□□□□ -1.24
HERC4-206ENST00000427635 DDX10Q13206 875 aaKnown RBP7.31□□□□□ -1.24
HERC4-206ENST00000427635 SF3B2Q13435 895 aaKnown RBP7.31□□□□□ -1.24
HERC4-206ENST00000427635 NEUROD2Q15784 382 aa7.3□□□□□ -1.24
HERC4-206ENST00000427635 TCEAL9Q9UHQ7 104 aa7.3□□□□□ -1.24
HERC4-206ENST00000427635 FRAT2O75474 233 aaPredicted RBP7.3□□□□□ -1.24
HERC4-206ENST00000427635 ANO8Q9HCE9 1232 aaPredicted RBP7.3□□□□□ -1.24
HERC4-206ENST00000427635 TNNT2P45379 298 aaPredicted RBP7.3□□□□□ -1.24
HERC4-206ENST00000427635 CHMP3Q9Y3E7 222 aa7.29□□□□□ -1.24
HERC4-206ENST00000427635 PLCD4Q9BRC7 762 aa7.29□□□□□ -1.24
HERC4-206ENST00000427635 ZBTB22O15209 634 aa7.29□□□□□ -1.24
HERC4-206ENST00000427635 CARD11Q9BXL7 1154 aa7.29□□□□□ -1.24
HERC4-206ENST00000427635 MARCH6O60337 910 aa7.28□□□□□ -1.24
HERC4-206ENST00000427635 PUS7Q96PZ0 661 aaKnown RBP7.28□□□□□ -1.24
HERC4-206ENST00000427635 CEP89Q96ST8 783 aa7.28□□□□□ -1.24
HERC4-206ENST00000427635 GGT6Q6P531 493 aa7.28□□□□□ -1.24
HERC4-206ENST00000427635 NOL10Q9BSC4 688 aaKnown RBP7.28□□□□□ -1.24
HERC4-206ENST00000427635 EIF4G1Q04637 1599 aaKnown RBP7.27□□□□□ -1.24
HERC4-206ENST00000427635 TICAM2Q86XR7 235 aa7.27□□□□□ -1.25
HERC4-206ENST00000427635 HSP90AB1P08238 724 aaKnown RBP7.27□□□□□ -1.25
HERC4-206ENST00000427635 GPATCH3Q96I76 525 aa7.27□□□□□ -1.25
HERC4-206ENST00000427635 STK26Q9P289 416 aa7.27□□□□□ -1.25
HERC4-206ENST00000427635 DEKP35659 375 aaKnown RBP7.26□□□□□ -1.25
HERC4-206ENST00000427635 KIAA1211Q6ZU35 1233 aa7.26□□□□□ -1.25
HERC4-206ENST00000427635 AMOTL1Q8IY63 956 aa7.26□□□□□ -1.25
HERC4-206ENST00000427635 TSHZ2Q9NRE2 1034 aa7.26□□□□□ -1.25
HERC4-206ENST00000427635 HDAC5Q9UQL6 1122 aa7.26□□□□□ -1.25
HERC4-206ENST00000427635 WASHC2AQ641Q2 1341 aa7.26□□□□□ -1.25
HERC4-206ENST00000427635 CALD1Q05682 793 aaKnown RBP7.26□□□□□ -1.25
HERC4-206ENST00000427635 CCDC34Q96HJ3 373 aa7.26□□□□□ -1.25
HERC4-206ENST00000427635 RSPH6AQ9H0K4 717 aa7.25□□□□□ -1.25
HERC4-206ENST00000427635 SPAG9O60271 1321 aaKnown RBP7.25□□□□□ -1.25
HERC4-206ENST00000427635 SAFB2Q14151 953 aaKnown RBP eCLIP7.25□□□□□ -1.252e-6■■■■□ 19.5
HERC4-206ENST00000427635 ERICH6BQ5W0A0 696 aa7.25□□□□□ -1.25
HERC4-206ENST00000427635 RASSF8Q8NHQ8 419 aa7.25□□□□□ -1.25
HERC4-206ENST00000427635 TMF1P82094 1093 aa7.25□□□□□ -1.25
HERC4-206ENST00000427635 CCNB3Q8WWL7 1395 aa7.25□□□□□ -1.25
HERC4-206ENST00000427635 NGDNQ8NEJ9 315 aaKnown RBP7.24□□□□□ -1.25
HERC4-206ENST00000427635 CYB5RLQ6IPT4 315 aa7.24□□□□□ -1.25
HERC4-206ENST00000427635 FRAT1Q92837 279 aaPredicted RBP7.24□□□□□ -1.25
HERC4-206ENST00000427635 MORC1Q86VD1 984 aa7.24□□□□□ -1.25
HERC4-206ENST00000427635 FBXW7Q969H0 707 aa7.24□□□□□ -1.25
HERC4-206ENST00000427635 HTATSF1O43719 755 aaKnown RBP7.23□□□□□ -1.25
HERC4-206ENST00000427635 FOXD4L5Q5VV16 416 aaPredicted RBP7.23□□□□□ -1.25
HERC4-206ENST00000427635 SPRYD3Q8NCJ5 442 aa7.23□□□□□ -1.25
HERC4-206ENST00000427635 FOXD4L4Q8WXT5 416 aaPredicted RBP7.23□□□□□ -1.25
HERC4-206ENST00000427635 PATL2C9JE40 543 aaKnown RBP7.23□□□□□ -1.25
HERC4-206ENST00000427635 ZFP91Q96JP5 570 aaPredicted RBP7.23□□□□□ -1.25
HERC4-206ENST00000427635 BAZ1BQ9UIG0 1483 aaKnown RBP7.23□□□□□ -1.25
HERC4-206ENST00000427635 DRC7Q8IY82 874 aa7.23□□□□□ -1.25
HERC4-206ENST00000427635 WWC1Q8IX03 1113 aa7.23□□□□□ -1.25
HERC4-206ENST00000427635 CARMIL2Q6F5E8 1435 aa7.23□□□□□ -1.25
HERC4-206ENST00000427635 ZCCHC6Q5VYS8 1495 aaKnown RBP7.22□□□□□ -1.25
HERC4-206ENST00000427635 TPM4P67936 248 aa7.22□□□□□ -1.25
HERC4-206ENST00000427635 NPM3O75607 178 aaKnown RBP7.22□□□□□ -1.25
HERC4-206ENST00000427635 DNAJC5BQ9UF47 199 aa7.22□□□□□ -1.25
HERC4-206ENST00000427635 CC2D1BQ5T0F9 858 aaKnown RBP7.21□□□□□ -1.25
HERC4-206ENST00000427635 STK31Q9BXU1 1019 aa7.21□□□□□ -1.26
HERC4-206ENST00000427635 CCAR1Q8IX12 1150 aaKnown RBP7.21□□□□□ -1.26
HERC4-206ENST00000427635 AMPHP49418 695 aa7.2□□□□□ -1.26
HERC4-206ENST00000427635 TOMM22Q9NS69 142 aa7.2□□□□□ -1.26
HERC4-206ENST00000427635 CECR2Q9BXF3 1484 aa7.2□□□□□ -1.26
HERC4-206ENST00000427635 OSCARQ8IYS5 282 aa7.19□□□□□ -1.26
HERC4-206ENST00000427635 C1orf141Q5JVX7 400 aa7.19□□□□□ -1.26
HERC4-206ENST00000427635 WWC2Q6AWC2 1192 aa7.19□□□□□ -1.26
HERC4-206ENST00000427635 FOXD4L1Q9NU39 408 aa7.19□□□□□ -1.26
HERC4-206ENST00000427635 IPO8O15397 1037 aaKnown RBP7.19□□□□□ -1.26
HERC4-206ENST00000427635 BBXQ8WY36 941 aaPredicted RBP7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms