RNA–Protein interactions for RNA: ENST00000425970.5

GARNL3-203, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-203ENST00000425970 HS6ST3Q8IZP7 471 aa9.64□□□□□ -0.87
GARNL3-203ENST00000425970 TMEM92Q6UXU6 159 aa9.62□□□□□ -0.87
GARNL3-203ENST00000425970 FAM205CA6NFA0 338 aa9.61□□□□□ -0.87
GARNL3-203ENST00000425970 HOXB1P14653 301 aaPredicted RBP9.59□□□□□ -0.87
GARNL3-203ENST00000425970 ZSWIM6Q9HCJ5 1215 aa9.59□□□□□ -0.87
GARNL3-203ENST00000425970 DCAF8L2P0C7V8 631 aa9.58□□□□□ -0.88
GARNL3-203ENST00000425970 TMC2Q8TDI7 906 aa9.58□□□□□ -0.88
GARNL3-203ENST00000425970 HS3ST6Q96QI5 342 aa9.57□□□□□ -0.88
GARNL3-203ENST00000425970 RYDENQ9NUL5 291 aaKnown RBP9.57□□□□□ -0.88
GARNL3-203ENST00000425970 ERBB3P21860 1342 aa9.56□□□□□ -0.88
GARNL3-203ENST00000425970 CCDC180Q9P1Z9 1646 aa9.54□□□□□ -0.88
GARNL3-203ENST00000425970 C2orf72A6NCS6 295 aa9.54□□□□□ -0.88
GARNL3-203ENST00000425970 PPP1R37O75864 691 aa9.53□□□□□ -0.88
GARNL3-203ENST00000425970 KIF3CO14782 793 aa9.5□□□□□ -0.89
GARNL3-203ENST00000425970 ARSIQ5FYB1 569 aa9.49□□□□□ -0.89
GARNL3-203ENST00000425970 VARS2Q5ST30 1063 aaKnown RBP9.49□□□□□ -0.89
GARNL3-203ENST00000425970 GPR153Q6NV75 609 aa9.49□□□□□ -0.89
GARNL3-203ENST00000425970 DNAJC5Q9H3Z4 198 aa9.48□□□□□ -0.89
GARNL3-203ENST00000425970 POTEB3A0JP26 581 aa9.47□□□□□ -0.89
GARNL3-203ENST00000425970 POTEBQ6S5H4 581 aa9.47□□□□□ -0.89
GARNL3-203ENST00000425970 NKX1-1Q15270 411 aaPredicted RBP9.45□□□□□ -0.9
GARNL3-203ENST00000425970 SPNS2Q8IVW8 549 aa9.43□□□□□ -0.9
GARNL3-203ENST00000425970 SLC34A2O95436 690 aa9.42□□□□□ -0.9
GARNL3-203ENST00000425970 KRTAP3-3Q9BYR6 98 aa9.42□□□□□ -0.9
GARNL3-203ENST00000425970 KRTAP3-2Q9BYR7 98 aa9.42□□□□□ -0.9
GARNL3-203ENST00000425970 GPHNQ9NQX3 736 aaPredicted RBP9.42□□□□□ -0.9
GARNL3-203ENST00000425970 ZNF316A6NFI3 1004 aaPredicted RBP9.41□□□□□ -0.9
GARNL3-203ENST00000425970 KHSRPQ92945 711 aaKnown RBP eCLIP9.41□□□□□ -0.9
GARNL3-203ENST00000425970 PCDHGA4Q9Y5G9 962 aa9.41□□□□□ -0.9
GARNL3-203ENST00000425970 NUDT7P0C024 238 aa9.4□□□□□ -0.9
GARNL3-203ENST00000425970 ZNF687Q8N1G0 1237 aa9.4□□□□□ -0.9
GARNL3-203ENST00000425970 FOXK1P85037 733 aa9.39□□□□□ -0.91
GARNL3-203ENST00000425970 MMRN1Q13201 1228 aa9.39□□□□□ -0.91
GARNL3-203ENST00000425970 PLPP6Q8IY26 295 aa9.39□□□□□ -0.91
GARNL3-203ENST00000425970 ABCC9O60706 1549 aa9.37□□□□□ -0.91
GARNL3-203ENST00000425970 TBC1D12O60347 775 aa9.37□□□□□ -0.91
GARNL3-203ENST00000425970 DSG2Q14126 1118 aa9.36□□□□□ -0.91
GARNL3-203ENST00000425970 GTPBP6O43824 516 aaPredicted RBP9.34□□□□□ -0.91
GARNL3-203ENST00000425970 AMER1Q5JTC6 1135 aaPredicted RBP9.34□□□□□ -0.91
GARNL3-203ENST00000425970 PSDA5PKW4 1024 aaPredicted RBP9.33□□□□□ -0.92
GARNL3-203ENST00000425970 PDE4AP27815 886 aa9.33□□□□□ -0.92
GARNL3-203ENST00000425970 PTCD2Q8WV60 388 aaKnown RBP9.33□□□□□ -0.92
GARNL3-203ENST00000425970 LHX6Q9UPM6 363 aa9.33□□□□□ -0.92
GARNL3-203ENST00000425970 PBX2P40425 430 aa9.3□□□□□ -0.92
GARNL3-203ENST00000425970 PPP1R15BQ5SWA1 713 aa9.3□□□□□ -0.92
GARNL3-203ENST00000425970 ANKRD13DQ6ZTN6 518 aa9.3□□□□□ -0.92
GARNL3-203ENST00000425970 CRISPLD2Q9H0B8 497 aa9.3□□□□□ -0.92
GARNL3-203ENST00000425970 PTGER2P43116 358 aa9.27□□□□□ -0.93
GARNL3-203ENST00000425970 UPF1Q92900 1129 aaKnown RBP eCLIP9.27□□□□□ -0.93
GARNL3-203ENST00000425970 LARP6Q9BRS8 491 aaKnown RBP9.27□□□□□ -0.93
GARNL3-203ENST00000425970 LSM11P83369 360 aaKnown RBP eCLIP9.26□□□□□ -0.93
GARNL3-203ENST00000425970 PPP4R3BQ5MIZ7 849 aa9.25□□□□□ -0.93
GARNL3-203ENST00000425970 BBXQ8WY36 941 aaPredicted RBP9.25□□□□□ -0.93
GARNL3-203ENST00000425970 DDX27Q96GQ7 796 aaKnown RBP9.25□□□□□ -0.93
GARNL3-203ENST00000425970 MYT1LQ9UL68 1186 aa9.25□□□□□ -0.93
GARNL3-203ENST00000425970 NCKAP5LQ9HCH0 1330 aa9.25□□□□□ -0.93
GARNL3-203ENST00000425970 RNF166Q96A37 237 aaPredicted RBP9.24□□□□□ -0.93
GARNL3-203ENST00000425970 KCNH8Q96L42 1107 aa9.24□□□□□ -0.93
GARNL3-203ENST00000425970 OXER1Q8TDS5 423 aa9.23□□□□□ -0.93
GARNL3-203ENST00000425970 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.23□□□□□ -0.93
GARNL3-203ENST00000425970 AXIN2Q9Y2T1 843 aa9.22□□□□□ -0.93
GARNL3-203ENST00000425970 KDM4FA0A1W2PPD8 638 aa9.21□□□□□ -0.94
GARNL3-203ENST00000425970 ARHGAP33O14559 1287 aa9.21□□□□□ -0.94
GARNL3-203ENST00000425970 RTN4Q9NQC3 1192 aaKnown RBP9.21□□□□□ -0.94
GARNL3-203ENST00000425970 MAP3K9P80192 1104 aa9.18□□□□□ -0.94
GARNL3-203ENST00000425970 MFSD10Q14728 455 aa9.17□□□□□ -0.94
GARNL3-203ENST00000425970 ZNF454Q8N9F8 522 aa9.17□□□□□ -0.94
GARNL3-203ENST00000425970 SPRYD3Q8NCJ5 442 aa9.17□□□□□ -0.94
GARNL3-203ENST00000425970 EVI5O60447 810 aa9.15□□□□□ -0.94
GARNL3-203ENST00000425970 POTEEQ6S8J3 1075 aa9.15□□□□□ -0.94
GARNL3-203ENST00000425970 STAC3Q96MF2 364 aa9.15□□□□□ -0.94
GARNL3-203ENST00000425970 KCNK17Q96T54 332 aa9.15□□□□□ -0.94
GARNL3-203ENST00000425970 ADGRD1Q6QNK2 874 aa9.14□□□□□ -0.95
GARNL3-203ENST00000425970 CADPS2Q86UW7 1296 aa9.14□□□□□ -0.95
GARNL3-203ENST00000425970 PSEN2P49810 448 aa9.13□□□□□ -0.95
GARNL3-203ENST00000425970 TK2O00142 265 aa9.12□□□□□ -0.95
GARNL3-203ENST00000425970 FOSBP53539 338 aa9.1□□□□□ -0.95
GARNL3-203ENST00000425970 JPH4Q96JJ6 628 aa9.1□□□□□ -0.95
GARNL3-203ENST00000425970 CFAP44Q96MT7 982 aa9.1□□□□□ -0.95
GARNL3-203ENST00000425970 PTPREP23469 700 aa9.09□□□□□ -0.95
GARNL3-203ENST00000425970 DMRTA1Q5VZB9 504 aa9.09□□□□□ -0.95
GARNL3-203ENST00000425970 PAXIP1Q6ZW49 1069 aaPredicted RBP9.09□□□□□ -0.95
GARNL3-203ENST00000425970 BCL2L12Q9HB09 334 aa9.09□□□□□ -0.95
GARNL3-203ENST00000425970 ANO8Q9HCE9 1232 aaPredicted RBP9.09□□□□□ -0.95
GARNL3-203ENST00000425970 ZDHHC16Q969W1 377 aa9.08□□□□□ -0.96
GARNL3-203ENST00000425970 EMILIN3Q9NT22 766 aa9.08□□□□□ -0.96
GARNL3-203ENST00000425970 WDR70Q9NW82 654 aa9.04□□□□□ -0.96
GARNL3-203ENST00000425970 RB1CC1Q8TDY2 1594 aa9.03□□□□□ -0.96
GARNL3-203ENST00000425970 DPYSL4O14531 572 aa9.03□□□□□ -0.96
GARNL3-203ENST00000425970 CAMK2BQ13554 666 aa9.03□□□□□ -0.96
GARNL3-203ENST00000425970 FBXW7Q969H0 707 aa9.03□□□□□ -0.96
GARNL3-203ENST00000425970 HCSTQ9UBK5 93 aa9.03□□□□□ -0.96
GARNL3-203ENST00000425970 VPS9D1Q9Y2B5 631 aa9.03□□□□□ -0.96
GARNL3-203ENST00000425970 HRO43593 1189 aa9.02□□□□□ -0.97
GARNL3-203ENST00000425970 ADAM33Q9BZ11 813 aa9.02□□□□□ -0.97
GARNL3-203ENST00000425970 TYW1BQ6NUM6 668 aa9.01□□□□□ -0.97
GARNL3-203ENST00000425970 GOLGA8CPA6NN73 597 aa9□□□□□ -0.97
GARNL3-203ENST00000425970 PHF14O94880 888 aa9□□□□□ -0.97
GARNL3-203ENST00000425970 SLC4A5Q9BY07 1137 aa9□□□□□ -0.97
GARNL3-203ENST00000425970 PCDHGA10Q9Y5H3 936 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms