RNA–Protein interactions for RNA: ENST00000425967.7

FGFR1-211, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 1 (best) BASIC

Gene FGFR1, Length 5,375 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-211ENST00000425967 NOP58Q9Y2X3 529 aaKnown RBP16.08■□□□□ 0.16
FGFR1-211ENST00000425967 IPO8O15397 1037 aaKnown RBP16.07■□□□□ 0.16
FGFR1-211ENST00000425967 STK26Q9P289 416 aa16.06■□□□□ 0.16
FGFR1-211ENST00000425967 CALD1Q05682 793 aaKnown RBP16.05■□□□□ 0.16
FGFR1-211ENST00000425967 ISY1Q9ULR0 285 aaKnown RBP16.05■□□□□ 0.16
FGFR1-211ENST00000425967 NAP1L5Q96NT1 182 aaPredicted RBP16.05■□□□□ 0.16
FGFR1-211ENST00000425967 CUX2O14529 1486 aa16.04■□□□□ 0.16
FGFR1-211ENST00000425967 CLSTN1O94985 981 aa16.03■□□□□ 0.16
FGFR1-211ENST00000425967 CHMP4AQ9BY43 222 aa16.03■□□□□ 0.16
FGFR1-211ENST00000425967 KTN1Q86UP2 1357 aaKnown RBP16.03■□□□□ 0.16
FGFR1-211ENST00000425967 CSB-PGBD3P0DP91 1061 aa16.02■□□□□ 0.16
FGFR1-211ENST00000425967 PAK3O75914 559 aaPredicted RBP16.02■□□□□ 0.16
FGFR1-211ENST00000425967 PKD2Q13563 968 aa16.02■□□□□ 0.16
FGFR1-211ENST00000425967 GNL2Q13823 731 aaKnown RBP16.02■□□□□ 0.15
FGFR1-211ENST00000425967 KIAA1211Q6ZU35 1233 aa16.02■□□□□ 0.15
FGFR1-211ENST00000425967 RTN4Q9NQC3 1192 aaKnown RBP16.01■□□□□ 0.15
FGFR1-211ENST00000425967 CARMIL2Q6F5E8 1435 aa16.01■□□□□ 0.15
FGFR1-211ENST00000425967 CHAF1AQ13111 956 aaPredicted RBP16.01■□□□□ 0.15
FGFR1-211ENST00000425967 BAZ1AQ9NRL2 1556 aaPredicted RBP16.01■□□□□ 0.15
FGFR1-211ENST00000425967 CCER2I3L3R5 266 aa16■□□□□ 0.15
FGFR1-211ENST00000425967 SOGA1O94964 1423 aa16■□□□□ 0.15
FGFR1-211ENST00000425967 HSPA5P11021 654 aaKnown RBP15.99■□□□□ 0.15
FGFR1-211ENST00000425967 L1TD1Q5T7N2 865 aaKnown RBP15.99■□□□□ 0.15
FGFR1-211ENST00000425967 SETD5Q9C0A6 1442 aa15.98■□□□□ 0.15
FGFR1-211ENST00000425967 ARHGAP35Q9NRY4 1499 aa15.98■□□□□ 0.15
FGFR1-211ENST00000425967 U2AF1L5P0DN76 240 aaPredicted RBP15.98■□□□□ 0.15
FGFR1-211ENST00000425967 U2AF1Q01081 240 aaKnown RBP eCLIP15.98■□□□□ 0.15
FGFR1-211ENST00000425967 EFCAB2Q5VUJ9 269 aa15.97■□□□□ 0.15
FGFR1-211ENST00000425967 TMX4Q9H1E5 349 aaPredicted RBP15.97■□□□□ 0.15
FGFR1-211ENST00000425967 APBB1O00213 710 aa15.96■□□□□ 0.15
FGFR1-211ENST00000425967 DRC7Q8IY82 874 aa15.96■□□□□ 0.15
FGFR1-211ENST00000425967 ZNF330Q9Y3S2 320 aaPredicted RBP15.96■□□□□ 0.15
FGFR1-211ENST00000425967 RWDD1Q9H446 243 aaPredicted RBP15.94■□□□□ 0.14
FGFR1-211ENST00000425967 ROCK2O75116 1388 aaKnown RBP15.94■□□□□ 0.14
FGFR1-211ENST00000425967 RALBP1Q15311 655 aa15.94■□□□□ 0.14
FGFR1-211ENST00000425967 HDAC5Q9UQL6 1122 aa15.94■□□□□ 0.14
FGFR1-211ENST00000425967 CECR2Q9BXF3 1484 aa15.93■□□□□ 0.14
FGFR1-211ENST00000425967 MSNP26038 577 aaKnown RBP15.93■□□□□ 0.14
FGFR1-211ENST00000425967 STK31Q9BXU1 1019 aa15.93■□□□□ 0.14
FGFR1-211ENST00000425967 SPAG9O60271 1321 aaKnown RBP15.93■□□□□ 0.14
FGFR1-211ENST00000425967 EIF3AQ14152 1382 aaKnown RBP15.93■□□□□ 0.14
FGFR1-211ENST00000425967 RBM19Q9Y4C8 960 aaKnown RBP15.92■□□□□ 0.14
FGFR1-211ENST00000425967 ITPRIPQ8IWB1 547 aa15.92■□□□□ 0.14
FGFR1-211ENST00000425967 SPRYD3Q8NCJ5 442 aa15.92■□□□□ 0.14
FGFR1-211ENST00000425967 HTATSF1O43719 755 aaKnown RBP15.92■□□□□ 0.14
FGFR1-211ENST00000425967 KANK4Q5T7N3 995 aaPredicted RBP15.91■□□□□ 0.14
FGFR1-211ENST00000425967 NUP155O75694 1391 aa15.91■□□□□ 0.14
FGFR1-211ENST00000425967 PTMSP20962 102 aa15.91■□□□□ 0.14
FGFR1-211ENST00000425967 GORABQ5T7V8 394 aa15.91■□□□□ 0.14
FGFR1-211ENST00000425967 ANKRD30AQ9BXX3 1397 aa15.91■□□□□ 0.14
FGFR1-211ENST00000425967 TERF2IPQ9NYB0 399 aa15.9■□□□□ 0.14
FGFR1-211ENST00000425967 FOXD1Q16676 465 aa15.9■□□□□ 0.14
FGFR1-211ENST00000425967 KIAA2012Q0VF49 1180 aa15.9■□□□□ 0.14
FGFR1-211ENST00000425967 NCBP3Q53F19 620 aaKnown RBP15.9■□□□□ 0.14
FGFR1-211ENST00000425967 EID1Q9Y6B2 187 aa15.89■□□□□ 0.13
FGFR1-211ENST00000425967 GBP4Q96PP9 640 aa15.89■□□□□ 0.13
FGFR1-211ENST00000425967 CCDC9Q9Y3X0 531 aaKnown RBP15.89■□□□□ 0.13
FGFR1-211ENST00000425967 VPS8Q8N3P4 1428 aa15.89■□□□□ 0.13
FGFR1-211ENST00000425967 GPATCH3Q96I76 525 aa15.89■□□□□ 0.13
FGFR1-211ENST00000425967 RCAN3Q9UKA8 241 aa15.88■□□□□ 0.13
FGFR1-211ENST00000425967 MPHOSPH9Q99550 1183 aa15.88■□□□□ 0.13
FGFR1-211ENST00000425967 TAF7LQ5H9L4 462 aa15.87■□□□□ 0.13
FGFR1-211ENST00000425967 PDS5BQ9NTI5 1447 aa15.86■□□□□ 0.13
FGFR1-211ENST00000425967 HMMRO75330 724 aa15.86■□□□□ 0.13
FGFR1-211ENST00000425967 KIF3BO15066 747 aa15.86■□□□□ 0.13
FGFR1-211ENST00000425967 PMFBP1Q8TBY8 1022 aa15.86■□□□□ 0.13
FGFR1-211ENST00000425967 CHMP3Q9Y3E7 222 aa15.86■□□□□ 0.13
FGFR1-211ENST00000425967 FMN1Q68DA7 1419 aa15.85■□□□□ 0.13
FGFR1-211ENST00000425967 CCDC34Q96HJ3 373 aa15.85■□□□□ 0.13
FGFR1-211ENST00000425967 NGDNQ8NEJ9 315 aaKnown RBP15.84■□□□□ 0.13
FGFR1-211ENST00000425967 DEKP35659 375 aaKnown RBP15.84■□□□□ 0.13
FGFR1-211ENST00000425967 LMOD3Q0VAK6 560 aa15.83■□□□□ 0.12
FGFR1-211ENST00000425967 SYAP1Q96A49 352 aaPredicted RBP15.83■□□□□ 0.12
FGFR1-211ENST00000425967 SMC4Q9NTJ3 1288 aa15.83■□□□□ 0.12
FGFR1-211ENST00000425967 RAB3GAP2Q9H2M9 1393 aa15.82■□□□□ 0.12
FGFR1-211ENST00000425967 RSPH4AQ5TD94 716 aa15.81■□□□□ 0.12
FGFR1-211ENST00000425967 G3V3G9 751 aa15.81■□□□□ 0.12
FGFR1-211ENST00000425967 TPM4P67936 248 aa15.81■□□□□ 0.12
FGFR1-211ENST00000425967 DCAF8Q5TAQ9 597 aa15.81■□□□□ 0.12
FGFR1-211ENST00000425967 AMPHP49418 695 aa15.8■□□□□ 0.12
FGFR1-211ENST00000425967 WASHC2CQ9Y4E1 1318 aa15.8■□□□□ 0.12
FGFR1-211ENST00000425967 TCERG1O14776 1098 aaKnown RBP15.8■□□□□ 0.12
FGFR1-211ENST00000425967 TRIM6-TRIM34B2RNG4 842 aa15.8■□□□□ 0.12
FGFR1-211ENST00000425967 HSP90B1P14625 803 aaKnown RBP15.79■□□□□ 0.12
FGFR1-211ENST00000425967 TDRD9Q8NDG6 1382 aaKnown RBP15.78■□□□□ 0.12
FGFR1-211ENST00000425967 SLC4A10Q6U841 1118 aa15.78■□□□□ 0.12
FGFR1-211ENST00000425967 ABCC8Q09428 1581 aa15.78■□□□□ 0.12
FGFR1-211ENST00000425967 HNRNPMP52272 730 aaKnown RBP eCLIP15.76■□□□□ 0.116e-6■□□□□ 8.8
FGFR1-211ENST00000425967 NOC3LQ8WTT2 800 aaKnown RBP15.76■□□□□ 0.11
FGFR1-211ENST00000425967 GTF2E1P29083 439 aaPredicted RBP15.76■□□□□ 0.11
FGFR1-211ENST00000425967 CSPP1Q1MSJ5 1256 aa15.76■□□□□ 0.11
FGFR1-211ENST00000425967 CCDC88BA6NC98 1476 aa15.75■□□□□ 0.11
FGFR1-211ENST00000425967 MFAP1P55081 439 aaKnown RBP15.75■□□□□ 0.11
FGFR1-211ENST00000425967 RASSF8Q8NHQ8 419 aa15.75■□□□□ 0.11
FGFR1-211ENST00000425967 SLKQ9H2G2 1235 aaPredicted RBP15.74■□□□□ 0.11
FGFR1-211ENST00000425967 NLRP13Q86W25 1043 aa15.74■□□□□ 0.11
FGFR1-211ENST00000425967 CENPJQ9HC77 1338 aaPredicted RBP15.74■□□□□ 0.11
FGFR1-211ENST00000425967 FRAT2O75474 233 aaPredicted RBP15.73■□□□□ 0.11
FGFR1-211ENST00000425967 NUTM2DQ5VT03 806 aaPredicted RBP15.73■□□□□ 0.11
FGFR1-211ENST00000425967 PDE3BQ13370 1112 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms