RNA–Protein interactions for RNA: ENST00000424225.1

TOP2B-203, Transcript of DNA topoisomerase II beta, humanhuman

TSL 1 (best)

Gene TOP2B, Length 3,525 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2B-203ENST00000424225 UGGT2Q9NYU1 1516 aa17.79■□□□□ 0.44
TOP2B-203ENST00000424225 KIF7Q2M1P5 1343 aa17.79■□□□□ 0.44
TOP2B-203ENST00000424225 DHX29Q7Z478 1369 aaKnown RBP17.79■□□□□ 0.44
TOP2B-203ENST00000424225 POLR1AO95602 1720 aaPredicted RBP17.78■□□□□ 0.44
TOP2B-203ENST00000424225 POLA1P09884 1462 aaPredicted RBP17.78■□□□□ 0.44
TOP2B-203ENST00000424225 TEX14Q8IWB6 1497 aa17.78■□□□□ 0.44
TOP2B-203ENST00000424225 NOP58Q9Y2X3 529 aaKnown RBP17.78■□□□□ 0.44
TOP2B-203ENST00000424225 RNF123Q5XPI4 1314 aa17.78■□□□□ 0.44
TOP2B-203ENST00000424225 TOPBP1Q92547 1522 aa17.77■□□□□ 0.44
TOP2B-203ENST00000424225 MRS2Q9HD23 443 aa17.76■□□□□ 0.43
TOP2B-203ENST00000424225 ABCA5Q8WWZ7 1642 aa17.76■□□□□ 0.43
TOP2B-203ENST00000424225 ABCA10Q8WWZ4 1543 aa17.76■□□□□ 0.43
TOP2B-203ENST00000424225 FMN1Q68DA7 1419 aa17.75■□□□□ 0.43
TOP2B-203ENST00000424225 IL27Q8NEV9 243 aa17.75■□□□□ 0.43
TOP2B-203ENST00000424225 ERICH6BQ5W0A0 696 aa17.74■□□□□ 0.43
TOP2B-203ENST00000424225 SALL2Q9Y467 1007 aaPredicted RBP17.74■□□□□ 0.43
TOP2B-203ENST00000424225 MTUS2Q5JR59 1369 aa17.74■□□□□ 0.43
TOP2B-203ENST00000424225 CNGB1Q14028 1251 aaPredicted RBP17.73■□□□□ 0.43
TOP2B-203ENST00000424225 SUPT6HQ7KZ85 1726 aaKnown RBP17.73■□□□□ 0.43
TOP2B-203ENST00000424225 EIF4G2P78344 907 aaKnown RBP eCLIP17.72■□□□□ 0.43
TOP2B-203ENST00000424225 MPHOSPH9Q99550 1183 aa17.72■□□□□ 0.43
TOP2B-203ENST00000424225 ERICH6Q7L0X2 663 aa17.71■□□□□ 0.43
TOP2B-203ENST00000424225 SKAP1Q86WV1 359 aa17.71■□□□□ 0.43
TOP2B-203ENST00000424225 TCOF1Q13428 1488 aaKnown RBP17.71■□□□□ 0.42
TOP2B-203ENST00000424225 SMG6Q86US8 1419 aaKnown RBP17.7■□□□□ 0.42
TOP2B-203ENST00000424225 ANKRD30BQ9BXX2 1392 aa17.69■□□□□ 0.42
TOP2B-203ENST00000424225 CUL7Q14999 1698 aa17.67■□□□□ 0.42
TOP2B-203ENST00000424225 RPRD2Q5VT52 1461 aaKnown RBP17.66■□□□□ 0.42
TOP2B-203ENST00000424225 CDK13Q14004 1512 aaKnown RBP17.65■□□□□ 0.42
TOP2B-203ENST00000424225 IPO9Q96P70 1041 aaKnown RBP17.64■□□□□ 0.41
TOP2B-203ENST00000424225 EHBP1L1Q8N3D4 1523 aa17.64■□□□□ 0.41
TOP2B-203ENST00000424225 ZNF644Q9H582 1327 aaPredicted RBP17.63■□□□□ 0.41
TOP2B-203ENST00000424225 ARID3CA6NKF2 412 aa17.61■□□□□ 0.41
TOP2B-203ENST00000424225 MBD5Q9P267 1494 aa17.61■□□□□ 0.41
TOP2B-203ENST00000424225 TDRD9Q8NDG6 1382 aaKnown RBP17.61■□□□□ 0.41
TOP2B-203ENST00000424225 CCDC136Q96JN2 1154 aa17.6■□□□□ 0.41
TOP2B-203ENST00000424225 RTN4Q9NQC3 1192 aaKnown RBP17.6■□□□□ 0.41
TOP2B-203ENST00000424225 NUDCQ9Y266 331 aa17.59■□□□□ 0.41
TOP2B-203ENST00000424225 PNISRQ8TF01 805 aaKnown RBP17.58■□□□□ 0.4
TOP2B-203ENST00000424225 EIF4G3O43432 1585 aaKnown RBP17.57■□□□□ 0.4
TOP2B-203ENST00000424225 KDM5CP41229 1560 aa17.56■□□□□ 0.4
TOP2B-203ENST00000424225 PZPP20742 1482 aa17.56■□□□□ 0.4
TOP2B-203ENST00000424225 EXOC6Q8TAG9 804 aa17.54■□□□□ 0.4
TOP2B-203ENST00000424225 PBRM1Q86U86 1689 aa17.54■□□□□ 0.4
TOP2B-203ENST00000424225 EPRSP07814 1512 aaKnown RBP17.53■□□□□ 0.4
TOP2B-203ENST00000424225 ABCC5O15440 1437 aa17.53■□□□□ 0.4
TOP2B-203ENST00000424225 LAS1LQ9Y4W2 734 aaKnown RBP17.51■□□□□ 0.39
TOP2B-203ENST00000424225 MAGI1Q96QZ7 1491 aaPredicted RBP17.5■□□□□ 0.39
TOP2B-203ENST00000424225 DAPK1P53355 1430 aa17.5■□□□□ 0.39
TOP2B-203ENST00000424225 LRPPRCP42704 1394 aaKnown RBP17.49■□□□□ 0.39
TOP2B-203ENST00000424225 DNMT1P26358 1616 aaKnown RBP17.47■□□□□ 0.39
TOP2B-203ENST00000424225 NPM2Q86SE8 214 aaKnown RBP17.46■□□□□ 0.39
TOP2B-203ENST00000424225 MYT1LQ9UL68 1186 aa17.46■□□□□ 0.39
TOP2B-203ENST00000424225 E9PCH4 1651 aa17.46■□□□□ 0.39
TOP2B-203ENST00000424225 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.46■□□□□ 0.38
TOP2B-203ENST00000424225 USP47Q96K76 1375 aa17.45■□□□□ 0.38
TOP2B-203ENST00000424225 CDCA7LQ96GN5 454 aa17.45■□□□□ 0.38
TOP2B-203ENST00000424225 ZBTB47Q9UFB7 747 aaPredicted RBP17.44■□□□□ 0.38
TOP2B-203ENST00000424225 GAPVD1Q14C86 1478 aa17.43■□□□□ 0.38
TOP2B-203ENST00000424225 MIA2Q96PC5 1412 aa17.43■□□□□ 0.38
TOP2B-203ENST00000424225 PLIN1O60240 522 aa17.43■□□□□ 0.38
TOP2B-203ENST00000424225 POLR3GLQ9BT43 218 aa17.43■□□□□ 0.38
TOP2B-203ENST00000424225 PDE4AP27815 886 aa17.42■□□□□ 0.38
TOP2B-203ENST00000424225 BACH2Q9BYV9 841 aa17.42■□□□□ 0.38
TOP2B-203ENST00000424225 RRP1P56182 461 aaKnown RBP17.42■□□□□ 0.38
TOP2B-203ENST00000424225 KIF14Q15058 1648 aa17.41■□□□□ 0.38
TOP2B-203ENST00000424225 BRPF3Q9ULD4 1205 aa17.41■□□□□ 0.38
TOP2B-203ENST00000424225 WASHC2CQ9Y4E1 1318 aa17.41■□□□□ 0.38
TOP2B-203ENST00000424225 SLC4A1APQ9BWU0 796 aaKnown RBP17.4■□□□□ 0.38
TOP2B-203ENST00000424225 CLASP1Q7Z460 1538 aa17.39■□□□□ 0.38
TOP2B-203ENST00000424225 ANP32AP39687 249 aaKnown RBP17.39■□□□□ 0.38
TOP2B-203ENST00000424225 SLC4A3P48751 1232 aa17.39■□□□□ 0.37
TOP2B-203ENST00000424225 ZNF326Q5BKZ1 582 aaKnown RBP17.38■□□□□ 0.37
TOP2B-203ENST00000424225 ROCK1Q13464 1354 aa17.38■□□□□ 0.37
TOP2B-203ENST00000424225 C20orf194Q5TEA3 1177 aa17.38■□□□□ 0.37
TOP2B-203ENST00000424225 ADAMTS12P58397 1594 aa17.37■□□□□ 0.37
TOP2B-203ENST00000424225 NEFMP07197 916 aa17.35■□□□□ 0.37
TOP2B-203ENST00000424225 SHROOM2Q13796 1616 aa17.35■□□□□ 0.37
TOP2B-203ENST00000424225 CHD1O14646 1710 aa17.34■□□□□ 0.37
TOP2B-203ENST00000424225 KIAA0586Q9BVV6 1533 aa17.34■□□□□ 0.37
TOP2B-203ENST00000424225 NUP153P49790 1475 aaKnown RBP17.33■□□□□ 0.36
TOP2B-203ENST00000424225 ST20-MTHFSA0A0A6YYL1 179 aa17.31■□□□□ 0.36
TOP2B-203ENST00000424225 IQGAP2Q13576 1575 aa17.3■□□□□ 0.36
TOP2B-203ENST00000424225 SYNJ2O15056 1496 aa17.29■□□□□ 0.36
TOP2B-203ENST00000424225 RCAN3Q9UKA8 241 aa17.29■□□□□ 0.36
TOP2B-203ENST00000424225 DISP1Q96F81 1524 aa17.29■□□□□ 0.36
TOP2B-203ENST00000424225 UHRF1BP1Q6BDS2 1440 aa17.29■□□□□ 0.36
TOP2B-203ENST00000424225 CROCC2H7BZ55 1655 aa17.29■□□□□ 0.36
TOP2B-203ENST00000424225 TMC1Q8TDI8 760 aa17.29■□□□□ 0.36
TOP2B-203ENST00000424225 ZNF608Q9ULD9 1512 aaPredicted RBP17.28■□□□□ 0.36
TOP2B-203ENST00000424225 PER1O15534 1290 aaPredicted RBP17.28■□□□□ 0.36
TOP2B-203ENST00000424225 KIAA1107Q9UPP5 1409 aa17.28■□□□□ 0.36
TOP2B-203ENST00000424225 RALGAPBQ86X10 1494 aa17.28■□□□□ 0.36
TOP2B-203ENST00000424225 PRG4Q92954 1404 aaPredicted RBP17.28■□□□□ 0.36
TOP2B-203ENST00000424225 PKD2Q13563 968 aa17.27■□□□□ 0.36
TOP2B-203ENST00000424225 CAMSAP2Q08AD1 1489 aa17.27■□□□□ 0.35
TOP2B-203ENST00000424225 CRBNQ96SW2 442 aa17.26■□□□□ 0.35
TOP2B-203ENST00000424225 DNAJC5Q9H3Z4 198 aa17.26■□□□□ 0.35
TOP2B-203ENST00000424225 ADGBQ8N7X0 1667 aa17.25■□□□□ 0.35
TOP2B-203ENST00000424225 TCERG1O14776 1098 aaKnown RBP17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms