RNA–Protein interactions for RNA: ENST00000424022.2

LBR-204, Transcript of lamin B receptor, humanhuman

TSL 3

Gene LBR, Length 478 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LBR-204ENST00000424022 DPY19L2Q6NUT2 758 aa12.88□□□□□ -0.35
LBR-204ENST00000424022 SCUBE2Q9NQ36 999 aa12.88□□□□□ -0.35
LBR-204ENST00000424022 PDE4AP27815 886 aa12.87□□□□□ -0.35
LBR-204ENST00000424022 CRISPLD2Q9H0B8 497 aa12.82□□□□□ -0.36
LBR-204ENST00000424022 MFSD10Q14728 455 aa12.81□□□□□ -0.36
LBR-204ENST00000424022 NCKAP5LQ9HCH0 1330 aa12.81□□□□□ -0.36
LBR-204ENST00000424022 L3MBTL3Q96JM7 780 aaPredicted RBP12.8□□□□□ -0.36
LBR-204ENST00000424022 E2F4Q16254 413 aa12.79□□□□□ -0.36
LBR-204ENST00000424022 KCNV2Q8TDN2 545 aa12.79□□□□□ -0.36
LBR-204ENST00000424022 ARHGEF1Q92888 912 aaKnown RBP12.77□□□□□ -0.37
LBR-204ENST00000424022 DDX27Q96GQ7 796 aaKnown RBP12.77□□□□□ -0.37
LBR-204ENST00000424022 LARP6Q9BRS8 491 aaKnown RBP12.77□□□□□ -0.37
LBR-204ENST00000424022 G3V3G9 751 aa12.75□□□□□ -0.37
LBR-204ENST00000424022 MICALL2Q8IY33 904 aa12.75□□□□□ -0.37
LBR-204ENST00000424022 SLAIN1Q8ND83 568 aa12.75□□□□□ -0.37
LBR-204ENST00000424022 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.74□□□□□ -0.37
LBR-204ENST00000424022 BOLA1Q9Y3E2 137 aa12.74□□□□□ -0.37
LBR-204ENST00000424022 TMEM121BQ9BXQ6 578 aaPredicted RBP12.73□□□□□ -0.37
LBR-204ENST00000424022 GPHNQ9NQX3 736 aaPredicted RBP12.72□□□□□ -0.37
LBR-204ENST00000424022 C3orf67Q6ZVT6 689 aa12.71□□□□□ -0.37
LBR-204ENST00000424022 ARIH1Q9Y4X5 557 aaPredicted RBP12.7□□□□□ -0.38
LBR-204ENST00000424022 CAMK2BQ13554 666 aa12.68□□□□□ -0.38
LBR-204ENST00000424022 TMC2Q8TDI7 906 aa12.67□□□□□ -0.38
LBR-204ENST00000424022 PPP1R15BQ5SWA1 713 aa12.66□□□□□ -0.38
LBR-204ENST00000424022 TPRNQ4KMQ1 711 aa12.65□□□□□ -0.38
LBR-204ENST00000424022 TULP1O00294 542 aaPredicted RBP12.63□□□□□ -0.39
LBR-204ENST00000424022 FOXK1P85037 733 aa12.62□□□□□ -0.39
LBR-204ENST00000424022 FAM163AQ96GL9 167 aaPredicted RBP12.62□□□□□ -0.39
LBR-204ENST00000424022 KIF3CO14782 793 aa12.58□□□□□ -0.4
LBR-204ENST00000424022 DSG2Q14126 1118 aa12.58□□□□□ -0.4
LBR-204ENST00000424022 PRKCSHP14314 528 aaPredicted RBP12.57□□□□□ -0.4
LBR-204ENST00000424022 LCE2DQ5TA82 110 aaPredicted RBP12.56□□□□□ -0.4
LBR-204ENST00000424022 C2orf72A6NCS6 295 aa12.55□□□□□ -0.4
LBR-204ENST00000424022 TMEM92Q6UXU6 159 aa12.55□□□□□ -0.4
LBR-204ENST00000424022 TESPA1A2RU30 521 aaPredicted RBP12.54□□□□□ -0.4
LBR-204ENST00000424022 SMYD5Q6GMV2 418 aa12.53□□□□□ -0.4
LBR-204ENST00000424022 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.52□□□□□ -0.41
LBR-204ENST00000424022 PLPP6Q8IY26 295 aa12.52□□□□□ -0.41
LBR-204ENST00000424022 SPDYE16A6NNV3 312 aaPredicted RBP12.5□□□□□ -0.41
LBR-204ENST00000424022 LMOD2Q6P5Q4 547 aa12.5□□□□□ -0.41
LBR-204ENST00000424022 SEMA3EO15041 775 aa12.49□□□□□ -0.41
LBR-204ENST00000424022 SNPHO15079 494 aa12.49□□□□□ -0.41
LBR-204ENST00000424022 ST18O60284 1047 aa12.48□□□□□ -0.41
LBR-204ENST00000424022 EMILIN3Q9NT22 766 aa12.48□□□□□ -0.41
LBR-204ENST00000424022 PDIA6Q15084 440 aa12.46□□□□□ -0.41
LBR-204ENST00000424022 POTEMA6NI47 508 aa12.45□□□□□ -0.42
LBR-204ENST00000424022 POTEGQ6S5H5 508 aa12.45□□□□□ -0.42
LBR-204ENST00000424022 DPYSL4O14531 572 aa12.44□□□□□ -0.42
LBR-204ENST00000424022 HOXB3P14651 431 aaPredicted RBP12.41□□□□□ -0.42
LBR-204ENST00000424022 MAP3K9P80192 1104 aa12.39□□□□□ -0.43
LBR-204ENST00000424022 OXER1Q8TDS5 423 aa12.39□□□□□ -0.43
LBR-204ENST00000424022 TBC1D12O60347 775 aa12.36□□□□□ -0.43
LBR-204ENST00000424022 SLC34A2O95436 690 aa12.36□□□□□ -0.43
LBR-204ENST00000424022 MARVELD3Q96A59 401 aa12.35□□□□□ -0.43
LBR-204ENST00000424022 DOK7Q18PE1 504 aa12.34□□□□□ -0.43
LBR-204ENST00000424022 PTCD2Q8WV60 388 aaKnown RBP12.34□□□□□ -0.43
LBR-204ENST00000424022 ZNF316A6NFI3 1004 aaPredicted RBP12.33□□□□□ -0.44
LBR-204ENST00000424022 ZNF710Q8N1W2 664 aa12.33□□□□□ -0.44
LBR-204ENST00000424022 MLLT3P42568 568 aaPredicted RBP12.32□□□□□ -0.44
LBR-204ENST00000424022 UPF1Q92900 1129 aaKnown RBP eCLIP12.31□□□□□ -0.44
LBR-204ENST00000424022 PTGER2P43116 358 aa12.3□□□□□ -0.44
LBR-204ENST00000424022 ZC3H15Q8WU90 426 aaKnown RBP12.3□□□□□ -0.44
LBR-204ENST00000424022 RIMBP2O15034 1052 aa12.27□□□□□ -0.45
LBR-204ENST00000424022 EVI5O60447 810 aa12.26□□□□□ -0.45
LBR-204ENST00000424022 HOXB1P14653 301 aaPredicted RBP12.26□□□□□ -0.45
LBR-204ENST00000424022 EMP3P54852 163 aa12.26□□□□□ -0.45
LBR-204ENST00000424022 GPIHBP1Q8IV16 184 aa12.25□□□□□ -0.45
LBR-204ENST00000424022 GPR153Q6NV75 609 aa12.23□□□□□ -0.45
LBR-204ENST00000424022 ZMYND10O75800 440 aa12.22□□□□□ -0.45
LBR-204ENST00000424022 ARSIQ5FYB1 569 aa12.22□□□□□ -0.45
LBR-204ENST00000424022 RBM26Q5T8P6 1007 aaKnown RBP12.22□□□□□ -0.45
LBR-204ENST00000424022 ANO8Q9HCE9 1232 aaPredicted RBP12.22□□□□□ -0.45
LBR-204ENST00000424022 ZSWIM6Q9HCJ5 1215 aa12.22□□□□□ -0.45
LBR-204ENST00000424022 FAM205CA6NFA0 338 aa12.21□□□□□ -0.45
LBR-204ENST00000424022 KHSRPQ92945 711 aaKnown RBP eCLIP12.21□□□□□ -0.45
LBR-204ENST00000424022 GRXCR2A6NFK2 248 aa12.2□□□□□ -0.46
LBR-204ENST00000424022 POTEB3A0JP26 581 aa12.19□□□□□ -0.46
LBR-204ENST00000424022 POTEBQ6S5H4 581 aa12.19□□□□□ -0.46
LBR-204ENST00000424022 CDAN1Q8IWY9 1227 aa12.19□□□□□ -0.46
LBR-204ENST00000424022 PCDHGA4Q9Y5G9 962 aa12.19□□□□□ -0.46
LBR-204ENST00000424022 BARGINQ6ZT62 677 aa12.18□□□□□ -0.46
LBR-204ENST00000424022 OSBPP22059 807 aa12.17□□□□□ -0.46
LBR-204ENST00000424022 HS3ST6Q96QI5 342 aa12.17□□□□□ -0.46
LBR-204ENST00000424022 PCDH10Q9P2E7 1040 aa12.17□□□□□ -0.46
LBR-204ENST00000424022 DDX12PQ92771 950 aa12.15□□□□□ -0.46
LBR-204ENST00000424022 EPAS1Q99814 870 aa12.15□□□□□ -0.46
LBR-204ENST00000424022 PHF14O94880 888 aa12.14□□□□□ -0.47
LBR-204ENST00000424022 ERBB3P21860 1342 aa12.13□□□□□ -0.47
LBR-204ENST00000424022 NUDT7P0C024 238 aa12.12□□□□□ -0.47
LBR-204ENST00000424022 SLC24A3Q9HC58 644 aa12.11□□□□□ -0.47
LBR-204ENST00000424022 KDM4FA0A1W2PPD8 638 aa12.1□□□□□ -0.47
LBR-204ENST00000424022 GPR37O15354 613 aa12.1□□□□□ -0.47
LBR-204ENST00000424022 VARS2Q5ST30 1063 aaKnown RBP12.1□□□□□ -0.47
LBR-204ENST00000424022 NUTM2FA1L443 756 aa12.09□□□□□ -0.47
LBR-204ENST00000424022 JPH4Q96JJ6 628 aa12.09□□□□□ -0.47
LBR-204ENST00000424022 FCHSD2O94868 740 aa12.08□□□□□ -0.48
LBR-204ENST00000424022 FBXW7Q969H0 707 aa12.08□□□□□ -0.48
LBR-204ENST00000424022 AK7Q96M32 723 aa12.08□□□□□ -0.48
LBR-204ENST00000424022 EN1Q05925 392 aaPredicted RBP12.07□□□□□ -0.48
LBR-204ENST00000424022 HIC1Q14526 733 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms