RNA–Protein interactions for RNA: ENST00000423723.1

NCDN-204, Transcript of neurochondrin, humanhuman

TSL 3

Gene NCDN, Length 986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-204ENST00000423723 MYO5CQ9NQX4 1742 aa18.51■□□□□ 0.55
NCDN-204ENST00000423723 POGZQ7Z3K3 1410 aa18.5■□□□□ 0.55
NCDN-204ENST00000423723 GPATCH8Q9UKJ3 1502 aaKnown RBP18.47■□□□□ 0.55
NCDN-204ENST00000423723 CDC42BPBQ9Y5S2 1711 aa18.46■□□□□ 0.55
NCDN-204ENST00000423723 ARHGAP5Q13017 1502 aa18.45■□□□□ 0.54
NCDN-204ENST00000423723 VPS8Q8N3P4 1428 aa18.45■□□□□ 0.54
NCDN-204ENST00000423723 YEATS2Q9ULM3 1422 aa18.44■□□□□ 0.54
NCDN-204ENST00000423723 PREX2Q70Z35 1606 aa18.44■□□□□ 0.54
NCDN-204ENST00000423723 ZNF518AQ6AHZ1 1483 aa18.44■□□□□ 0.54
NCDN-204ENST00000423723 ARHGEF40Q8TER5 1519 aa18.44■□□□□ 0.54
NCDN-204ENST00000423723 MTUS2Q5JR59 1369 aa18.43■□□□□ 0.54
NCDN-204ENST00000423723 AFAP1Q8N556 730 aa18.43■□□□□ 0.54
NCDN-204ENST00000423723 KDM5CP41229 1560 aa18.42■□□□□ 0.54
NCDN-204ENST00000423723 ARHGEF12Q9NZN5 1544 aa18.42■□□□□ 0.54
NCDN-204ENST00000423723 KIAA1107Q9UPP5 1409 aa18.4■□□□□ 0.54
NCDN-204ENST00000423723 CDC42BPAQ5VT25 1732 aa18.4■□□□□ 0.54
NCDN-204ENST00000423723 MLH3Q9UHC1 1453 aa18.4■□□□□ 0.54
NCDN-204ENST00000423723 MAP3K1Q13233 1512 aa18.39■□□□□ 0.54
NCDN-204ENST00000423723 ZFYVE16Q7Z3T8 1539 aa18.39■□□□□ 0.54
NCDN-204ENST00000423723 ADAMTSL3P82987 1691 aa18.39■□□□□ 0.53
NCDN-204ENST00000423723 TRAPPC8Q9Y2L5 1435 aa18.39■□□□□ 0.53
NCDN-204ENST00000423723 ATP10AO60312 1499 aa18.39■□□□□ 0.53
NCDN-204ENST00000423723 ABCC1P33527 1531 aa18.39■□□□□ 0.53
NCDN-204ENST00000423723 EHBP1L1Q8N3D4 1523 aa18.38■□□□□ 0.53
NCDN-204ENST00000423723 CFDP1Q9UEE9 299 aaPredicted RBP18.37■□□□□ 0.53
NCDN-204ENST00000423723 CCNB3Q8WWL7 1395 aa18.37■□□□□ 0.53
NCDN-204ENST00000423723 BCORL1Q5H9F3 1711 aa18.35■□□□□ 0.53
NCDN-204ENST00000423723 PLEKHH2Q8IVE3 1493 aa18.34■□□□□ 0.53
NCDN-204ENST00000423723 TIAM1Q13009 1591 aa18.34■□□□□ 0.53
NCDN-204ENST00000423723 SAMD9LQ8IVG5 1584 aa18.33■□□□□ 0.52
NCDN-204ENST00000423723 C9orf84Q5VXU9 1444 aa18.32■□□□□ 0.52
NCDN-204ENST00000423723 ARID4BQ4LE39 1312 aaPredicted RBP18.32■□□□□ 0.52
NCDN-204ENST00000423723 REREQ9P2R6 1566 aa18.32■□□□□ 0.52
NCDN-204ENST00000423723 LRRC9Q6ZRR7 1453 aa18.32■□□□□ 0.52
NCDN-204ENST00000423723 SIGLEC1Q9BZZ2 1709 aa18.31■□□□□ 0.52
NCDN-204ENST00000423723 PTPRMP28827 1452 aa18.31■□□□□ 0.52
NCDN-204ENST00000423723 HNRNPMP52272 730 aaKnown RBP eCLIP18.3■□□□□ 0.52
NCDN-204ENST00000423723 NCOA2Q15596 1464 aa18.3■□□□□ 0.52
NCDN-204ENST00000423723 MBD5Q9P267 1494 aa18.3■□□□□ 0.52
NCDN-204ENST00000423723 ITSN2Q9NZM3 1697 aa18.3■□□□□ 0.52
NCDN-204ENST00000423723 HECW2Q9P2P5 1572 aa18.3■□□□□ 0.52
NCDN-204ENST00000423723 ZNF777Q9ULD5 760 aaPredicted RBP18.29■□□□□ 0.52
NCDN-204ENST00000423723 KANK4Q5T7N3 995 aaPredicted RBP18.28■□□□□ 0.52
NCDN-204ENST00000423723 AGLP35573 1532 aa18.28■□□□□ 0.52
NCDN-204ENST00000423723 ZNF644Q9H582 1327 aaPredicted RBP18.27■□□□□ 0.52
NCDN-204ENST00000423723 DIP2CQ9Y2E4 1556 aa18.27■□□□□ 0.52
NCDN-204ENST00000423723 RSPH4AQ5TD94 716 aa18.27■□□□□ 0.52
NCDN-204ENST00000423723 SYCP2Q9BX26 1530 aa18.26■□□□□ 0.51
NCDN-204ENST00000423723 KIDINS220Q9ULH0 1771 aa18.26■□□□□ 0.51
NCDN-204ENST00000423723 SPAG9O60271 1321 aaKnown RBP18.25■□□□□ 0.51
NCDN-204ENST00000423723 SUPT6HQ7KZ85 1726 aaKnown RBP18.24■□□□□ 0.51
NCDN-204ENST00000423723 RTEL1-TNFRSF6BF6WH68 1400 aa18.23■□□□□ 0.51
NCDN-204ENST00000423723 MADDQ8WXG6 1647 aa18.23■□□□□ 0.51
NCDN-204ENST00000423723 ABCA6Q8N139 1617 aa18.23■□□□□ 0.51
NCDN-204ENST00000423723 MIA2Q96PC5 1412 aa18.19■□□□□ 0.5
NCDN-204ENST00000423723 MYT1LQ9UL68 1186 aa18.18■□□□□ 0.5
NCDN-204ENST00000423723 ATP7AQ04656 1500 aa18.18■□□□□ 0.5
NCDN-204ENST00000423723 INO80Q9ULG1 1556 aaPredicted RBP18.17■□□□□ 0.5
NCDN-204ENST00000423723 MLECQ14165 292 aa18.17■□□□□ 0.5
NCDN-204ENST00000423723 MYOM3Q5VTT5 1437 aa18.15■□□□□ 0.5
NCDN-204ENST00000423723 CAMSAP2Q08AD1 1489 aa18.15■□□□□ 0.5
NCDN-204ENST00000423723 PLXNC1O60486 1568 aa18.14■□□□□ 0.49
NCDN-204ENST00000423723 ARHGEF5Q12774 1597 aa18.14■□□□□ 0.49
NCDN-204ENST00000423723 PPP6R1Q9UPN7 881 aa18.14■□□□□ 0.49
NCDN-204ENST00000423723 RIMS1Q86UR5 1692 aaKnown RBP18.14■□□□□ 0.49
NCDN-204ENST00000423723 A2MP01023 1474 aa18.14■□□□□ 0.49
NCDN-204ENST00000423723 CCDC141Q6ZP82 1450 aa18.14■□□□□ 0.49
NCDN-204ENST00000423723 APLP2Q06481 763 aa18.13■□□□□ 0.49
NCDN-204ENST00000423723 DHX29Q7Z478 1369 aaKnown RBP18.13■□□□□ 0.49
NCDN-204ENST00000423723 CNTLNQ9NXG0 1405 aa18.1■□□□□ 0.49
NCDN-204ENST00000423723 FER1L4A9Z1Z3 1794 aa18.09■□□□□ 0.49
NCDN-204ENST00000423723 LMTK3Q96Q04 1460 aa18.09■□□□□ 0.49
NCDN-204ENST00000423723 TSPY4P0CV99 314 aa18.09■□□□□ 0.49
NCDN-204ENST00000423723 TSPY10P0CW01 314 aa18.09■□□□□ 0.49
NCDN-204ENST00000423723 SETD1BQ9UPS6 1966 aaKnown RBP18.09■□□□□ 0.49
NCDN-204ENST00000423723 CEBPAP49715 358 aaPredicted RBP18.07■□□□□ 0.48
NCDN-204ENST00000423723 ADGBQ8N7X0 1667 aa18.06■□□□□ 0.48
NCDN-204ENST00000423723 MAST1Q9Y2H9 1570 aa18.05■□□□□ 0.48
NCDN-204ENST00000423723 TCOF1Q13428 1488 aaKnown RBP18.04■□□□□ 0.48
NCDN-204ENST00000423723 ZMYM3Q14202 1370 aa18.04■□□□□ 0.48
NCDN-204ENST00000423723 FGD6Q6ZV73 1430 aa18.02■□□□□ 0.48
NCDN-204ENST00000423723 ESF1Q9H501 851 aaKnown RBP18.01■□□□□ 0.47
NCDN-204ENST00000423723 ABCC5O15440 1437 aa18■□□□□ 0.47
NCDN-204ENST00000423723 GGT6Q6P531 493 aa18■□□□□ 0.47
NCDN-204ENST00000423723 NPATQ14207 1427 aa17.99■□□□□ 0.47
NCDN-204ENST00000423723 MROH2AA6NES4 1674 aa17.99■□□□□ 0.47
NCDN-204ENST00000423723 KIF3BO15066 747 aa17.98■□□□□ 0.47
NCDN-204ENST00000423723 SHANK2Q9UPX8 1470 aa17.98■□□□□ 0.47
NCDN-204ENST00000423723 FAM135AQ9P2D6 1515 aa17.98■□□□□ 0.47
NCDN-204ENST00000423723 C3P01024 1663 aa17.97■□□□□ 0.47
NCDN-204ENST00000423723 PTPN23Q9H3S7 1636 aa17.97■□□□□ 0.47
NCDN-204ENST00000423723 HSPA2P54652 639 aa17.95■□□□□ 0.46
NCDN-204ENST00000423723 PLPPR3Q6T4P5 718 aa17.94■□□□□ 0.46
NCDN-204ENST00000423723 DAPK1P53355 1430 aa17.94■□□□□ 0.46
NCDN-204ENST00000423723 PTPRKQ15262 1439 aa17.94■□□□□ 0.46
NCDN-204ENST00000423723 UHRF1BP1Q6BDS2 1440 aa17.94■□□□□ 0.46
NCDN-204ENST00000423723 PREX1Q8TCU6 1659 aa17.93■□□□□ 0.46
NCDN-204ENST00000423723 DNMT1P26358 1616 aaKnown RBP17.9■□□□□ 0.46
NCDN-204ENST00000423723 DUOX2Q9NRD8 1548 aa17.9■□□□□ 0.46
NCDN-204ENST00000423723 NCOA1Q15788 1441 aa17.89■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms