RNA–Protein interactions for RNA: ENST00000423251.1

MCF2L-214, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 734 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-214ENST00000423251 PTPRMP28827 1452 aa29.54■■■□□ 2.32
MCF2L-214ENST00000423251 MADDQ8WXG6 1647 aa29.53■■■□□ 2.32
MCF2L-214ENST00000423251 MTUS2Q5JR59 1369 aa29.5■■■□□ 2.31
MCF2L-214ENST00000423251 KIF14Q15058 1648 aa29.49■■■□□ 2.31
MCF2L-214ENST00000423251 ARID4BQ4LE39 1312 aaPredicted RBP29.48■■■□□ 2.31
MCF2L-214ENST00000423251 MAP3K1Q13233 1512 aa29.47■■■□□ 2.31
MCF2L-214ENST00000423251 ZMYM4Q5VZL5 1548 aa29.46■■■□□ 2.31
MCF2L-214ENST00000423251 APLP2Q06481 763 aa29.45■■■□□ 2.31
MCF2L-214ENST00000423251 TIAM1Q13009 1591 aa29.44■■■□□ 2.3
MCF2L-214ENST00000423251 PLCH2O75038 1416 aa29.43■■■□□ 2.3
MCF2L-214ENST00000423251 RIMS1Q86UR5 1692 aaKnown RBP29.43■■■□□ 2.3
MCF2L-214ENST00000423251 ZFYVE16Q7Z3T8 1539 aa29.42■■■□□ 2.3
MCF2L-214ENST00000423251 SIGLEC1Q9BZZ2 1709 aa29.42■■■□□ 2.3
MCF2L-214ENST00000423251 MYO5CQ9NQX4 1742 aa29.4■■■□□ 2.3
MCF2L-214ENST00000423251 YEATS2Q9ULM3 1422 aa29.39■■■□□ 2.3
MCF2L-214ENST00000423251 EHBP1L1Q8N3D4 1523 aa29.39■■■□□ 2.3
MCF2L-214ENST00000423251 LRRC9Q6ZRR7 1453 aa29.36■■■□□ 2.29
MCF2L-214ENST00000423251 POGZQ7Z3K3 1410 aa29.36■■■□□ 2.29
MCF2L-214ENST00000423251 KANK4Q5T7N3 995 aaPredicted RBP29.35■■■□□ 2.29
MCF2L-214ENST00000423251 EFCAB2Q5VUJ9 269 aa29.35■■■□□ 2.29
MCF2L-214ENST00000423251 SCAPERQ9BY12 1400 aa29.34■■■□□ 2.29
MCF2L-214ENST00000423251 MAGI2Q86UL8 1455 aa29.32■■■□□ 2.28
MCF2L-214ENST00000423251 LMTK3Q96Q04 1460 aa29.29■■■□□ 2.28
MCF2L-214ENST00000423251 CCNB3Q8WWL7 1395 aa29.28■■■□□ 2.28
MCF2L-214ENST00000423251 GPATCH8Q9UKJ3 1502 aaKnown RBP29.27■■■□□ 2.28
MCF2L-214ENST00000423251 FER1L4A9Z1Z3 1794 aa29.26■■■□□ 2.27
MCF2L-214ENST00000423251 ARHGAP5Q13017 1502 aa29.25■■■□□ 2.27
MCF2L-214ENST00000423251 SUPT6HQ7KZ85 1726 aaKnown RBP29.25■■■□□ 2.27
MCF2L-214ENST00000423251 NCOA2Q15596 1464 aa29.24■■■□□ 2.27
MCF2L-214ENST00000423251 PLPPR3Q6T4P5 718 aa29.23■■■□□ 2.27
MCF2L-214ENST00000423251 PREX2Q70Z35 1606 aa29.23■■■□□ 2.27
MCF2L-214ENST00000423251 CDC42BPAQ5VT25 1732 aa29.23■■■□□ 2.27
MCF2L-214ENST00000423251 CDC42BPBQ9Y5S2 1711 aa29.23■■■□□ 2.27
MCF2L-214ENST00000423251 CFDP1Q9UEE9 299 aaPredicted RBP29.22■■■□□ 2.27
MCF2L-214ENST00000423251 MLECQ14165 292 aa29.21■■■□□ 2.27
MCF2L-214ENST00000423251 C9orf84Q5VXU9 1444 aa29.19■■■□□ 2.26
MCF2L-214ENST00000423251 ATP10AO60312 1499 aa29.18■■■□□ 2.26
MCF2L-214ENST00000423251 ZNF518AQ6AHZ1 1483 aa29.17■■■□□ 2.26
MCF2L-214ENST00000423251 KDM5CP41229 1560 aa29.16■■■□□ 2.26
MCF2L-214ENST00000423251 ZNF777Q9ULD5 760 aaPredicted RBP29.14■■■□□ 2.26
MCF2L-214ENST00000423251 ARHGEF12Q9NZN5 1544 aa29.14■■■□□ 2.25
MCF2L-214ENST00000423251 ITSN2Q9NZM3 1697 aa29.11■■■□□ 2.25
MCF2L-214ENST00000423251 HSPA2P54652 639 aa29.1■■■□□ 2.25
MCF2L-214ENST00000423251 DIP2CQ9Y2E4 1556 aa29.09■■■□□ 2.25
MCF2L-214ENST00000423251 AFAP1Q8N556 730 aa29.09■■■□□ 2.25
MCF2L-214ENST00000423251 ABCC1P33527 1531 aa29.08■■■□□ 2.25
MCF2L-214ENST00000423251 ABCA6Q8N139 1617 aa29.07■■■□□ 2.24
MCF2L-214ENST00000423251 KIAA1107Q9UPP5 1409 aa29.07■■■□□ 2.24
MCF2L-214ENST00000423251 PLEKHH2Q8IVE3 1493 aa29.06■■■□□ 2.24
MCF2L-214ENST00000423251 SAMD9LQ8IVG5 1584 aa29.05■■■□□ 2.24
MCF2L-214ENST00000423251 MYOM3Q5VTT5 1437 aa29.04■■■□□ 2.24
MCF2L-214ENST00000423251 ZNF644Q9H582 1327 aaPredicted RBP29.04■■■□□ 2.24
MCF2L-214ENST00000423251 FBXO41Q8TF61 875 aa29.03■■■□□ 2.24
MCF2L-214ENST00000423251 MYT1LQ9UL68 1186 aa29.03■■■□□ 2.24
MCF2L-214ENST00000423251 MIA2Q96PC5 1412 aa29.03■■■□□ 2.24
MCF2L-214ENST00000423251 HNRNPMP52272 730 aaKnown RBP eCLIP29.02■■■□□ 2.24
MCF2L-214ENST00000423251 TRAPPC8Q9Y2L5 1435 aa29.01■■■□□ 2.23
MCF2L-214ENST00000423251 REREQ9P2R6 1566 aa29.01■■■□□ 2.23
MCF2L-214ENST00000423251 PREX1Q8TCU6 1659 aa29■■■□□ 2.23
MCF2L-214ENST00000423251 MLH3Q9UHC1 1453 aa28.99■■■□□ 2.23
MCF2L-214ENST00000423251 SYCP2Q9BX26 1530 aa28.96■■■□□ 2.23
MCF2L-214ENST00000423251 RSPH4AQ5TD94 716 aa28.96■■■□□ 2.23
MCF2L-214ENST00000423251 CEBPAP49715 358 aaPredicted RBP28.95■■■□□ 2.22
MCF2L-214ENST00000423251 PPARGC1BQ86YN6 1023 aaKnown RBP28.95■■■□□ 2.22
MCF2L-214ENST00000423251 KIDINS220Q9ULH0 1771 aa28.94■■■□□ 2.22
MCF2L-214ENST00000423251 CAMSAP2Q08AD1 1489 aa28.93■■■□□ 2.22
MCF2L-214ENST00000423251 MBD5Q9P267 1494 aa28.93■■■□□ 2.22
MCF2L-214ENST00000423251 FGD6Q6ZV73 1430 aa28.9■■■□□ 2.22
MCF2L-214ENST00000423251 AGLP35573 1532 aa28.89■■■□□ 2.22
MCF2L-214ENST00000423251 C3P01024 1663 aa28.89■■■□□ 2.21
MCF2L-214ENST00000423251 SPAG9O60271 1321 aaKnown RBP28.87■■■□□ 2.21
MCF2L-214ENST00000423251 PTPN23Q9H3S7 1636 aa28.83■■■□□ 2.21
MCF2L-214ENST00000423251 UHRF1BP1Q6BDS2 1440 aa28.83■■■□□ 2.21
MCF2L-214ENST00000423251 TCOF1Q13428 1488 aaKnown RBP28.83■■■□□ 2.21
MCF2L-214ENST00000423251 CCDC141Q6ZP82 1450 aa28.82■■■□□ 2.2
MCF2L-214ENST00000423251 ARHGEF5Q12774 1597 aa28.82■■■□□ 2.2
MCF2L-214ENST00000423251 SETD1BQ9UPS6 1966 aaKnown RBP28.81■■■□□ 2.2
MCF2L-214ENST00000423251 TSPY4P0CV99 314 aa28.81■■■□□ 2.2
MCF2L-214ENST00000423251 TSPY10P0CW01 314 aa28.81■■■□□ 2.2
MCF2L-214ENST00000423251 STRCQ7RTU9 1775 aa28.8■■■□□ 2.2
MCF2L-214ENST00000423251 RTEL1-TNFRSF6BF6WH68 1400 aa28.78■■■□□ 2.2
MCF2L-214ENST00000423251 INO80Q9ULG1 1556 aaPredicted RBP28.75■■■□□ 2.19
MCF2L-214ENST00000423251 ATP7AQ04656 1500 aa28.75■■■□□ 2.19
MCF2L-214ENST00000423251 ESF1Q9H501 851 aaKnown RBP28.75■■■□□ 2.19
MCF2L-214ENST00000423251 FAM50AQ14320 339 aaKnown RBP28.74■■■□□ 2.19
MCF2L-214ENST00000423251 CERKQ8TCT0 537 aa28.72■■■□□ 2.19
MCF2L-214ENST00000423251 CNTLNQ9NXG0 1405 aa28.71■■■□□ 2.19
MCF2L-214ENST00000423251 MROH2AA6NES4 1674 aa28.7■■■□□ 2.19
MCF2L-214ENST00000423251 ABCC5O15440 1437 aa28.7■■■□□ 2.19
MCF2L-214ENST00000423251 PLXNC1O60486 1568 aa28.69■■■□□ 2.18
MCF2L-214ENST00000423251 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.68■■■□□ 2.183e-7■■□□□ 13
MCF2L-214ENST00000423251 DAPK1P53355 1430 aa28.68■■■□□ 2.18
MCF2L-214ENST00000423251 MAST1Q9Y2H9 1570 aa28.66■■■□□ 2.18
MCF2L-214ENST00000423251 A2MP01023 1474 aa28.65■■■□□ 2.18
MCF2L-214ENST00000423251 DNMT1P26358 1616 aaKnown RBP28.65■■■□□ 2.18
MCF2L-214ENST00000423251 CLTCQ00610 1675 aaKnown RBP28.64■■■□□ 2.18
MCF2L-214ENST00000423251 RRBP1Q9P2E9 1410 aaKnown RBP28.63■■■□□ 2.17
MCF2L-214ENST00000423251 SHANK2Q9UPX8 1470 aa28.63■■■□□ 2.17
MCF2L-214ENST00000423251 DMRT2Q9Y5R5 561 aa28.61■■■□□ 2.17
MCF2L-214ENST00000423251 DHX29Q7Z478 1369 aaKnown RBP28.61■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms