RNA–Protein interactions for RNA: ENST00000422933.5

HDLBP-209, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-209ENST00000422933 CFAP74Q9C0B2 1584 aa15.34■□□□□ 0.05
HDLBP-209ENST00000422933 TTC37Q6PGP7 1564 aa15.33■□□□□ 0.05
HDLBP-209ENST00000422933 CFDP1Q9UEE9 299 aaPredicted RBP15.33■□□□□ 0.04
HDLBP-209ENST00000422933 PLCH2O75038 1416 aa15.33■□□□□ 0.04
HDLBP-209ENST00000422933 PPARGC1BQ86YN6 1023 aaKnown RBP15.32■□□□□ 0.04
HDLBP-209ENST00000422933 PHLDB1Q86UU1 1377 aa15.32■□□□□ 0.04
HDLBP-209ENST00000422933 ARHGAP5Q13017 1502 aa15.32■□□□□ 0.04
HDLBP-209ENST00000422933 ARAP3Q8WWN8 1544 aa15.31■□□□□ 0.04
HDLBP-209ENST00000422933 CDC42BPAQ5VT25 1732 aa15.3■□□□□ 0.04
HDLBP-209ENST00000422933 ZNF777Q9ULD5 760 aaPredicted RBP15.3■□□□□ 0.04
HDLBP-209ENST00000422933 PREX2Q70Z35 1606 aa15.29■□□□□ 0.04
HDLBP-209ENST00000422933 FANCAO15360 1455 aa15.29■□□□□ 0.04
HDLBP-209ENST00000422933 GPATCH8Q9UKJ3 1502 aaKnown RBP15.28■□□□□ 0.04
HDLBP-209ENST00000422933 NEO1Q92859 1461 aa15.28■□□□□ 0.04
HDLBP-209ENST00000422933 MYOM3Q5VTT5 1437 aa15.27■□□□□ 0.04
HDLBP-209ENST00000422933 CDC42BPBQ9Y5S2 1711 aa15.27■□□□□ 0.04
HDLBP-209ENST00000422933 PLEKHH2Q8IVE3 1493 aa15.26■□□□□ 0.03
HDLBP-209ENST00000422933 MIA2Q96PC5 1412 aa15.26■□□□□ 0.03
HDLBP-209ENST00000422933 AKNAQ7Z591 1439 aa15.25■□□□□ 0.03
HDLBP-209ENST00000422933 RSPH4AQ5TD94 716 aa15.22■□□□□ 0.03
HDLBP-209ENST00000422933 MYT1LQ9UL68 1186 aa15.21■□□□□ 0.03
HDLBP-209ENST00000422933 FGD6Q6ZV73 1430 aa15.2■□□□□ 0.02
HDLBP-209ENST00000422933 FAM50AQ14320 339 aaKnown RBP15.2■□□□□ 0.02
HDLBP-209ENST00000422933 SCAPERQ9BY12 1400 aa15.19■□□□□ 0.02
HDLBP-209ENST00000422933 DENND4BO75064 1496 aaPredicted RBP15.19■□□□□ 0.02
HDLBP-209ENST00000422933 PTPN23Q9H3S7 1636 aa15.18■□□□□ 0.02
HDLBP-209ENST00000422933 CAMSAP2Q08AD1 1489 aa15.18■□□□□ 0.02
HDLBP-209ENST00000422933 ADAMTSL3P82987 1691 aa15.18■□□□□ 0.02
HDLBP-209ENST00000422933 KIAA1107Q9UPP5 1409 aa15.17■□□□□ 0.02
HDLBP-209ENST00000422933 FRMPD1Q5SYB0 1578 aa15.17■□□□□ 0.02
HDLBP-209ENST00000422933 TSPY4P0CV99 314 aa15.17■□□□□ 0.02
HDLBP-209ENST00000422933 TSPY10P0CW01 314 aa15.17■□□□□ 0.02
HDLBP-209ENST00000422933 SAMD9LQ8IVG5 1584 aa15.16■□□□□ 0.02
HDLBP-209ENST00000422933 HNRNPMP52272 730 aaKnown RBP eCLIP15.16■□□□□ 0.023e-7■■■□□ 17.2
HDLBP-209ENST00000422933 ABCC1P33527 1531 aa15.15■□□□□ 0.02
HDLBP-209ENST00000422933 ZNF644Q9H582 1327 aaPredicted RBP15.15■□□□□ 0.02
HDLBP-209ENST00000422933 ZNF518AQ6AHZ1 1483 aa15.14■□□□□ 0.01
HDLBP-209ENST00000422933 SYCP2Q9BX26 1530 aa15.13■□□□□ 0.01
HDLBP-209ENST00000422933 TCOF1Q13428 1488 aaKnown RBP15.13■□□□□ 0.01
HDLBP-209ENST00000422933 RAPGEF3O95398 923 aa15.12■□□□□ 0.01
HDLBP-209ENST00000422933 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.11■□□□□ 0.01
HDLBP-209ENST00000422933 POGZQ7Z3K3 1410 aa15.11■□□□□ 0.01
HDLBP-209ENST00000422933 CCDC141Q6ZP82 1450 aa15.11■□□□□ 0.01
HDLBP-209ENST00000422933 SIGLEC1Q9BZZ2 1709 aa15.11■□□□□ 0.01
HDLBP-209ENST00000422933 SPAG9O60271 1321 aaKnown RBP15.11■□□□□ 0.01
HDLBP-209ENST00000422933 ARHGEF5Q12774 1597 aa15.11■□□□□ 0.01
HDLBP-209ENST00000422933 BCORL1Q5H9F3 1711 aa15.1■□□□□ 0.01
HDLBP-209ENST00000422933 AFAP1Q8N556 730 aa15.1■□□□□ 0.01
HDLBP-209ENST00000422933 RRBP1Q9P2E9 1410 aaKnown RBP15.09■□□□□ 0.01
HDLBP-209ENST00000422933 RICTORQ6R327 1708 aa15.09■□□□□ 0.01
HDLBP-209ENST00000422933 MADDQ8WXG6 1647 aa15.09■□□□□ 0.01
HDLBP-209ENST00000422933 PTPRMP28827 1452 aa15.08■□□□□ 0.01
HDLBP-209ENST00000422933 MAGI2Q86UL8 1455 aa15.08■□□□□ 0.01
HDLBP-209ENST00000422933 ITGAEP38570 1179 aa15.08■□□□□ 0
HDLBP-209ENST00000422933 TRAPPC8Q9Y2L5 1435 aa15.08■□□□□ 0
HDLBP-209ENST00000422933 MBD5Q9P267 1494 aa15.07■□□□□ 0
HDLBP-209ENST00000422933 ARHGEF12Q9NZN5 1544 aa15.07■□□□□ 0
HDLBP-209ENST00000422933 DNMT1P26358 1616 aaKnown RBP15.06■□□□□ 0
HDLBP-209ENST00000422933 DAPK1P53355 1430 aa15.05■□□□□ -0
HDLBP-209ENST00000422933 KDM5CP41229 1560 aa15.04■□□□□ -0
HDLBP-209ENST00000422933 ZMYM4Q5VZL5 1548 aa15.04■□□□□ -0
HDLBP-209ENST00000422933 MLH3Q9UHC1 1453 aa15.04■□□□□ -0
HDLBP-209ENST00000422933 RTEL1-TNFRSF6BF6WH68 1400 aa15.04■□□□□ -0
HDLBP-209ENST00000422933 C9orf84Q5VXU9 1444 aa15.03■□□□□ -0
HDLBP-209ENST00000422933 RIMS1Q86UR5 1692 aaKnown RBP15.03■□□□□ -0
HDLBP-209ENST00000422933 ZFYVE16Q7Z3T8 1539 aa15.02■□□□□ -0
HDLBP-209ENST00000422933 LMTK3Q96Q04 1460 aa15.02■□□□□ -0
HDLBP-209ENST00000422933 SHANK2Q9UPX8 1470 aa15.02■□□□□ -0
HDLBP-209ENST00000422933 ABCC5O15440 1437 aa15.02■□□□□ -0
HDLBP-209ENST00000422933 ANKRD30AQ9BXX3 1397 aa15.02■□□□□ -0
HDLBP-209ENST00000422933 CHIC2Q9UKJ5 165 aa15.02■□□□□ -0
HDLBP-209ENST00000422933 CROCC2H7BZ55 1655 aa15.02□□□□□ -0.01
HDLBP-209ENST00000422933 ATP7AQ04656 1500 aa15.02□□□□□ -0.01
HDLBP-209ENST00000422933 ARHGEF40Q8TER5 1519 aa15.02□□□□□ -0.01
HDLBP-209ENST00000422933 MAST1Q9Y2H9 1570 aa15.01□□□□□ -0.01
HDLBP-209ENST00000422933 TRIM26Q12899 539 aaPredicted RBP15□□□□□ -0.01
HDLBP-209ENST00000422933 ADGBQ8N7X0 1667 aa15□□□□□ -0.01
HDLBP-209ENST00000422933 INO80Q9ULG1 1556 aaPredicted RBP14.98□□□□□ -0.01
HDLBP-209ENST00000422933 KIDINS220Q9ULH0 1771 aa14.98□□□□□ -0.01
HDLBP-209ENST00000422933 ARID4BQ4LE39 1312 aaPredicted RBP14.98□□□□□ -0.01
HDLBP-209ENST00000422933 ATP10AO60312 1499 aa14.98□□□□□ -0.01
HDLBP-209ENST00000422933 RRP7BPQ9NSQ0 103 aa14.97□□□□□ -0.01
HDLBP-209ENST00000422933 ROCK1Q13464 1354 aa14.96□□□□□ -0.02
HDLBP-209ENST00000422933 PLXNC1O60486 1568 aa14.95□□□□□ -0.02
HDLBP-209ENST00000422933 FBXO41Q8TF61 875 aa14.95□□□□□ -0.02
HDLBP-209ENST00000422933 KIF15Q9NS87 1388 aa14.95□□□□□ -0.02
HDLBP-209ENST00000422933 YEATS2Q9ULM3 1422 aa14.94□□□□□ -0.02
HDLBP-209ENST00000422933 ADGRL2O95490 1459 aa14.94□□□□□ -0.02
HDLBP-209ENST00000422933 A2MP01023 1474 aa14.94□□□□□ -0.02
HDLBP-209ENST00000422933 DIP2CQ9Y2E4 1556 aa14.94□□□□□ -0.02
HDLBP-209ENST00000422933 NCOA1Q15788 1441 aa14.93□□□□□ -0.02
HDLBP-209ENST00000422933 DUOX2Q9NRD8 1548 aa14.93□□□□□ -0.02
HDLBP-209ENST00000422933 ABCA6Q8N139 1617 aa14.93□□□□□ -0.02
HDLBP-209ENST00000422933 DHX29Q7Z478 1369 aaKnown RBP14.93□□□□□ -0.02
HDLBP-209ENST00000422933 ACIN1Q9UKV3 1341 aaKnown RBP14.92□□□□□ -0.02
HDLBP-209ENST00000422933 ESF1Q9H501 851 aaKnown RBP14.92□□□□□ -0.02
HDLBP-209ENST00000422933 REREQ9P2R6 1566 aa14.9□□□□□ -0.02
HDLBP-209ENST00000422933 FER1L4A9Z1Z3 1794 aa14.9□□□□□ -0.02
HDLBP-209ENST00000422933 PTPRKQ15262 1439 aa14.9□□□□□ -0.02
HDLBP-209ENST00000422933 KIF3BO15066 747 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms