RNA–Protein interactions for RNA: ENST00000422869.6

CTCFL-204, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 2,966 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-204ENST00000422869 CHIC2Q9UKJ5 165 aa17.35■□□□□ 0.37
CTCFL-204ENST00000422869 MPHOSPH9Q99550 1183 aa17.33■□□□□ 0.37
CTCFL-204ENST00000422869 KIF21AQ7Z4S6 1674 aa17.33■□□□□ 0.36
CTCFL-204ENST00000422869 SPATA31E1Q6ZUB1 1445 aa17.32■□□□□ 0.36
CTCFL-204ENST00000422869 SMG6Q86US8 1419 aaKnown RBP17.32■□□□□ 0.36
CTCFL-204ENST00000422869 KIF7Q2M1P5 1343 aa17.31■□□□□ 0.36
CTCFL-204ENST00000422869 TEX14Q8IWB6 1497 aa17.31■□□□□ 0.36
CTCFL-204ENST00000422869 NBPF8Q3BBV2 869 aa17.31■□□□□ 0.36
CTCFL-204ENST00000422869 FOXD1Q16676 465 aa17.3■□□□□ 0.36
CTCFL-204ENST00000422869 RPRD2Q5VT52 1461 aaKnown RBP17.3■□□□□ 0.36
CTCFL-204ENST00000422869 NBR1Q14596 966 aa17.29■□□□□ 0.36
CTCFL-204ENST00000422869 RNF123Q5XPI4 1314 aa17.28■□□□□ 0.36
CTCFL-204ENST00000422869 ANKRD30BQ9BXX2 1392 aa17.27■□□□□ 0.35
CTCFL-204ENST00000422869 DHX29Q7Z478 1369 aaKnown RBP17.24■□□□□ 0.35
CTCFL-204ENST00000422869 NUDCQ9Y266 331 aa17.24■□□□□ 0.35
CTCFL-204ENST00000422869 MIA2Q96PC5 1412 aa17.23■□□□□ 0.35
CTCFL-204ENST00000422869 IPO9Q96P70 1041 aaKnown RBP17.22■□□□□ 0.35
CTCFL-204ENST00000422869 CCDC136Q96JN2 1154 aa17.21■□□□□ 0.35
CTCFL-204ENST00000422869 NESP48681 1621 aa17.21■□□□□ 0.35
CTCFL-204ENST00000422869 LAMC3Q9Y6N6 1575 aa17.2■□□□□ 0.34
CTCFL-204ENST00000422869 ANP32AP39687 249 aaKnown RBP17.2■□□□□ 0.34
CTCFL-204ENST00000422869 BCORL1Q5H9F3 1711 aa17.2■□□□□ 0.34
CTCFL-204ENST00000422869 EPRSP07814 1512 aaKnown RBP17.2■□□□□ 0.34
CTCFL-204ENST00000422869 TDRD9Q8NDG6 1382 aaKnown RBP17.19■□□□□ 0.34
CTCFL-204ENST00000422869 GAPVD1Q14C86 1478 aa17.19■□□□□ 0.34
CTCFL-204ENST00000422869 URB2Q14146 1524 aaKnown RBP17.18■□□□□ 0.34
CTCFL-204ENST00000422869 CDK13Q14004 1512 aaKnown RBP17.17■□□□□ 0.34
CTCFL-204ENST00000422869 ROCK1Q13464 1354 aa17.16■□□□□ 0.34
CTCFL-204ENST00000422869 DAPK1P53355 1430 aa17.16■□□□□ 0.34
CTCFL-204ENST00000422869 DNMT1P26358 1616 aaKnown RBP17.15■□□□□ 0.34
CTCFL-204ENST00000422869 MBD5Q9P267 1494 aa17.14■□□□□ 0.34
CTCFL-204ENST00000422869 ZBTB47Q9UFB7 747 aaPredicted RBP17.14■□□□□ 0.33
CTCFL-204ENST00000422869 ANO8Q9HCE9 1232 aaPredicted RBP17.13■□□□□ 0.33
CTCFL-204ENST00000422869 WDR62O43379 1518 aa17.12■□□□□ 0.33
CTCFL-204ENST00000422869 ABCC5O15440 1437 aa17.12■□□□□ 0.33
CTCFL-204ENST00000422869 CNGB1Q14028 1251 aaPredicted RBP17.11■□□□□ 0.33
CTCFL-204ENST00000422869 PNISRQ8TF01 805 aaKnown RBP17.11■□□□□ 0.33
CTCFL-204ENST00000422869 SLC4A1APQ9BWU0 796 aaKnown RBP17.11■□□□□ 0.33
CTCFL-204ENST00000422869 KDM5CP41229 1560 aa17.11■□□□□ 0.33
CTCFL-204ENST00000422869 RTL5Q5HYW3 569 aaPredicted RBP17.1■□□□□ 0.33
CTCFL-204ENST00000422869 USP47Q96K76 1375 aa17.1■□□□□ 0.33
CTCFL-204ENST00000422869 SENP3-EIF4A1A0A087X0R7 540 aa17.1■□□□□ 0.33
CTCFL-204ENST00000422869 KIF14Q15058 1648 aa17.1■□□□□ 0.33
CTCFL-204ENST00000422869 PZPP20742 1482 aa17.09■□□□□ 0.33
CTCFL-204ENST00000422869 IQGAP2Q13576 1575 aa17.07■□□□□ 0.32
CTCFL-204ENST00000422869 ARID4BQ4LE39 1312 aaPredicted RBP17.05■□□□□ 0.32
CTCFL-204ENST00000422869 LRPPRCP42704 1394 aaKnown RBP17.05■□□□□ 0.32
CTCFL-204ENST00000422869 POLR3GLQ9BT43 218 aa17.05■□□□□ 0.32
CTCFL-204ENST00000422869 ZNF644Q9H582 1327 aaPredicted RBP17.04■□□□□ 0.32
CTCFL-204ENST00000422869 ARID3CA6NKF2 412 aa17.04■□□□□ 0.32
CTCFL-204ENST00000422869 TMC1Q8TDI8 760 aa17.03■□□□□ 0.32
CTCFL-204ENST00000422869 TARBP1Q13395 1621 aaKnown RBP17.02■□□□□ 0.32
CTCFL-204ENST00000422869 RRP1P56182 461 aaKnown RBP17.01■□□□□ 0.31
CTCFL-204ENST00000422869 PBRM1Q86U86 1689 aa17.01■□□□□ 0.31
CTCFL-204ENST00000422869 ROCK2O75116 1388 aaKnown RBP17■□□□□ 0.31
CTCFL-204ENST00000422869 KIAA1107Q9UPP5 1409 aa17■□□□□ 0.31
CTCFL-204ENST00000422869 EXOC6Q8TAG9 804 aa17■□□□□ 0.31
CTCFL-204ENST00000422869 ADGBQ8N7X0 1667 aa16.99■□□□□ 0.31
CTCFL-204ENST00000422869 ZNF326Q5BKZ1 582 aaKnown RBP16.99■□□□□ 0.31
CTCFL-204ENST00000422869 TCERG1O14776 1098 aaKnown RBP16.99■□□□□ 0.31
CTCFL-204ENST00000422869 IL27Q8NEV9 243 aa16.99■□□□□ 0.31
CTCFL-204ENST00000422869 NPM2Q86SE8 214 aaKnown RBP16.98■□□□□ 0.31
CTCFL-204ENST00000422869 KIF15Q9NS87 1388 aa16.98■□□□□ 0.31
CTCFL-204ENST00000422869 E9PCH4 1651 aa16.98■□□□□ 0.31
CTCFL-204ENST00000422869 RALGAPBQ86X10 1494 aa16.98■□□□□ 0.31
CTCFL-204ENST00000422869 BRD4O60885 1362 aaPredicted RBP16.97■□□□□ 0.31
CTCFL-204ENST00000422869 PDE4AP27815 886 aa16.97■□□□□ 0.31
CTCFL-204ENST00000422869 UHRF1BP1Q6BDS2 1440 aa16.97■□□□□ 0.31
CTCFL-204ENST00000422869 EIF5BO60841 1220 aaKnown RBP16.96■□□□□ 0.31
CTCFL-204ENST00000422869 BACH2Q9BYV9 841 aa16.96■□□□□ 0.31
CTCFL-204ENST00000422869 ADAMTS12P58397 1594 aa16.95■□□□□ 0.3
CTCFL-204ENST00000422869 MYBBP1AQ9BQG0 1328 aaKnown RBP16.95■□□□□ 0.3
CTCFL-204ENST00000422869 RCAN3Q9UKA8 241 aa16.94■□□□□ 0.3
CTCFL-204ENST00000422869 LAS1LQ9Y4W2 734 aaKnown RBP16.94■□□□□ 0.3
CTCFL-204ENST00000422869 NUP153P49790 1475 aaKnown RBP16.94■□□□□ 0.3
CTCFL-204ENST00000422869 CROCC2H7BZ55 1655 aa16.94■□□□□ 0.3
CTCFL-204ENST00000422869 CAMSAP2Q08AD1 1489 aa16.94■□□□□ 0.3
CTCFL-204ENST00000422869 NEFMP07197 916 aa16.94■□□□□ 0.3
CTCFL-204ENST00000422869 USP35Q9P2H5 1018 aa16.94■□□□□ 0.3
CTCFL-204ENST00000422869 KTN1Q86UP2 1357 aaKnown RBP16.93■□□□□ 0.3
CTCFL-204ENST00000422869 SALL2Q9Y467 1007 aaPredicted RBP16.93■□□□□ 0.3
CTCFL-204ENST00000422869 MS4A1P11836 297 aa16.92■□□□□ 0.3
CTCFL-204ENST00000422869 PKD2Q13563 968 aa16.92■□□□□ 0.3
CTCFL-204ENST00000422869 ADGRL2O95490 1459 aa16.92■□□□□ 0.3
CTCFL-204ENST00000422869 RALBP1Q15311 655 aa16.91■□□□□ 0.3
CTCFL-204ENST00000422869 CARD11Q9BXL7 1154 aa16.9■□□□□ 0.3
CTCFL-204ENST00000422869 ARHGEF12Q9NZN5 1544 aa16.9■□□□□ 0.3
CTCFL-204ENST00000422869 KIAA0556O60303 1618 aa16.9■□□□□ 0.3
CTCFL-204ENST00000422869 RAPGEF6Q8TEU7 1601 aa16.89■□□□□ 0.29
CTCFL-204ENST00000422869 ITSN2Q9NZM3 1697 aa16.89■□□□□ 0.29
CTCFL-204ENST00000422869 WASHC2CQ9Y4E1 1318 aa16.89■□□□□ 0.29
CTCFL-204ENST00000422869 PLEKHG5O94827 1062 aa16.88■□□□□ 0.29
CTCFL-204ENST00000422869 DISP1Q96F81 1524 aa16.88■□□□□ 0.29
CTCFL-204ENST00000422869 KIAA0586Q9BVV6 1533 aa16.87■□□□□ 0.29
CTCFL-204ENST00000422869 ST20-MTHFSA0A0A6YYL1 179 aa16.87■□□□□ 0.29
CTCFL-204ENST00000422869 PDS5BQ9NTI5 1447 aa16.87■□□□□ 0.29
CTCFL-204ENST00000422869 RTN4Q9NQC3 1192 aaKnown RBP16.87■□□□□ 0.29
CTCFL-204ENST00000422869 PDE3BQ13370 1112 aa16.86■□□□□ 0.29
CTCFL-204ENST00000422869 PPM1GO15355 546 aaPredicted RBP16.85■□□□□ 0.29
CTCFL-204ENST00000422869 PARD3Q8TEW0 1356 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms