RNA–Protein interactions for RNA: ENST00000422109.6

CTCFL-203, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 2,964 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-203ENST00000422109 NBPF8Q3BBV2 869 aa19.16■□□□□ 0.66
CTCFL-203ENST00000422109 FAM9BQ8IZU0 186 aa19.16■□□□□ 0.66
CTCFL-203ENST00000422109 SENP3-EIF4A1A0A087X0R7 540 aa19.15■□□□□ 0.66
CTCFL-203ENST00000422109 CFDP1Q9UEE9 299 aaPredicted RBP19.15■□□□□ 0.66
CTCFL-203ENST00000422109 KDM5BQ9UGL1 1544 aa19.14■□□□□ 0.66
CTCFL-203ENST00000422109 WDR62O43379 1518 aa19.14■□□□□ 0.65
CTCFL-203ENST00000422109 CDK11AQ9UQ88 783 aaPredicted RBP19.14■□□□□ 0.65
CTCFL-203ENST00000422109 TCOF1Q13428 1488 aaKnown RBP19.13■□□□□ 0.65
CTCFL-203ENST00000422109 PRG4Q92954 1404 aaPredicted RBP19.13■□□□□ 0.65
CTCFL-203ENST00000422109 DAPK1P53355 1430 aa19.11■□□□□ 0.65
CTCFL-203ENST00000422109 MIA2Q96PC5 1412 aa19.1■□□□□ 0.65
CTCFL-203ENST00000422109 ABCC5O15440 1437 aa19.09■□□□□ 0.65
CTCFL-203ENST00000422109 NUP153P49790 1475 aaKnown RBP19.08■□□□□ 0.65
CTCFL-203ENST00000422109 ERCC6Q03468 1493 aa19.08■□□□□ 0.65
CTCFL-203ENST00000422109 DISP1Q96F81 1524 aa19.08■□□□□ 0.64
CTCFL-203ENST00000422109 PLB1Q6P1J6 1458 aa19.06■□□□□ 0.64
CTCFL-203ENST00000422109 IFT140Q96RY7 1462 aa19.06■□□□□ 0.64
CTCFL-203ENST00000422109 GCC2Q8IWJ2 1684 aa19.06■□□□□ 0.64
CTCFL-203ENST00000422109 KIAA0586Q9BVV6 1533 aa19.06■□□□□ 0.64
CTCFL-203ENST00000422109 MRS2Q9HD23 443 aa19.05■□□□□ 0.64
CTCFL-203ENST00000422109 KIAA0556O60303 1618 aa19.04■□□□□ 0.64
CTCFL-203ENST00000422109 ANKRD30BQ9BXX2 1392 aa19.04■□□□□ 0.64
CTCFL-203ENST00000422109 GRIN2AQ12879 1464 aa19.03■□□□□ 0.64
CTCFL-203ENST00000422109 PKD2Q13563 968 aa19.02■□□□□ 0.64
CTCFL-203ENST00000422109 JPH4Q96JJ6 628 aa19.02■□□□□ 0.64
CTCFL-203ENST00000422109 KDM2AQ9Y2K7 1162 aa19.01■□□□□ 0.63
CTCFL-203ENST00000422109 CCDC7Q96M83 1385 aa19■□□□□ 0.63
CTCFL-203ENST00000422109 PRKRIP1Q9H875 184 aaPredicted RBP18.99■□□□□ 0.63
CTCFL-203ENST00000422109 KIF7Q2M1P5 1343 aa18.99■□□□□ 0.63
CTCFL-203ENST00000422109 RAPGEF6Q8TEU7 1601 aa18.99■□□□□ 0.63
CTCFL-203ENST00000422109 AKNAQ7Z591 1439 aa18.99■□□□□ 0.63
CTCFL-203ENST00000422109 CNTLNQ9NXG0 1405 aa18.98■□□□□ 0.63
CTCFL-203ENST00000422109 EIF4G3O43432 1585 aaKnown RBP18.98■□□□□ 0.63
CTCFL-203ENST00000422109 PLEKHD1A6NEE1 506 aa18.96■□□□□ 0.63
CTCFL-203ENST00000422109 CAMSAP2Q08AD1 1489 aa18.95■□□□□ 0.62
CTCFL-203ENST00000422109 RPRD2Q5VT52 1461 aaKnown RBP18.95■□□□□ 0.62
CTCFL-203ENST00000422109 ROCK1Q13464 1354 aa18.95■□□□□ 0.62
CTCFL-203ENST00000422109 TROQ12816 1431 aaPredicted RBP18.95■□□□□ 0.62
CTCFL-203ENST00000422109 RBM19Q9Y4C8 960 aaKnown RBP18.94■□□□□ 0.62
CTCFL-203ENST00000422109 HNRNPMP52272 730 aaKnown RBP eCLIP18.94■□□□□ 0.62
CTCFL-203ENST00000422109 DNMT1P26358 1616 aaKnown RBP18.94■□□□□ 0.62
CTCFL-203ENST00000422109 KIF14Q15058 1648 aa18.92■□□□□ 0.62
CTCFL-203ENST00000422109 NCOA1Q15788 1441 aa18.92■□□□□ 0.62
CTCFL-203ENST00000422109 GPATCH8Q9UKJ3 1502 aaKnown RBP18.91■□□□□ 0.62
CTCFL-203ENST00000422109 TEX14Q8IWB6 1497 aa18.9■□□□□ 0.62
CTCFL-203ENST00000422109 CEP170Q5SW79 1584 aa18.9■□□□□ 0.62
CTCFL-203ENST00000422109 NUP155O75694 1391 aa18.89■□□□□ 0.61
CTCFL-203ENST00000422109 PZPP20742 1482 aa18.89■□□□□ 0.61
CTCFL-203ENST00000422109 TSPY4P0CV99 314 aa18.88■□□□□ 0.61
CTCFL-203ENST00000422109 TSPY10P0CW01 314 aa18.88■□□□□ 0.61
CTCFL-203ENST00000422109 CARMIL2Q6F5E8 1435 aa18.88■□□□□ 0.61
CTCFL-203ENST00000422109 ANKRD30AQ9BXX3 1397 aa18.87■□□□□ 0.61
CTCFL-203ENST00000422109 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.86■□□□□ 0.611e-10■□□□□ 8.3
CTCFL-203ENST00000422109 SYNJ2O15056 1496 aa18.85■□□□□ 0.61
CTCFL-203ENST00000422109 USP47Q96K76 1375 aa18.85■□□□□ 0.61
CTCFL-203ENST00000422109 CARD11Q9BXL7 1154 aa18.85■□□□□ 0.61
CTCFL-203ENST00000422109 ANKRD50Q9ULJ7 1429 aa18.85■□□□□ 0.61
CTCFL-203ENST00000422109 DCAF11Q8TEB1 546 aa18.84■□□□□ 0.61
CTCFL-203ENST00000422109 B4GALNT3Q6L9W6 998 aa18.84■□□□□ 0.61
CTCFL-203ENST00000422109 RGL3Q3MIN7 710 aa18.84■□□□□ 0.61
CTCFL-203ENST00000422109 KIAA1107Q9UPP5 1409 aa18.83■□□□□ 0.6
CTCFL-203ENST00000422109 MAGI1Q96QZ7 1491 aaPredicted RBP18.81■□□□□ 0.6
CTCFL-203ENST00000422109 ANP32EQ9BTT0 268 aa18.81■□□□□ 0.6
CTCFL-203ENST00000422109 SPATA31E1Q6ZUB1 1445 aa18.8■□□□□ 0.6
CTCFL-203ENST00000422109 SALL2Q9Y467 1007 aaPredicted RBP18.79■□□□□ 0.6
CTCFL-203ENST00000422109 ST20-MTHFSA0A0A6YYL1 179 aa18.78■□□□□ 0.6
CTCFL-203ENST00000422109 C9orf84Q5VXU9 1444 aa18.77■□□□□ 0.6
CTCFL-203ENST00000422109 ATP10BO94823 1461 aa18.77■□□□□ 0.6
CTCFL-203ENST00000422109 ZBED9Q6R2W3 1325 aa18.75■□□□□ 0.59
CTCFL-203ENST00000422109 ITSN2Q9NZM3 1697 aa18.74■□□□□ 0.59
CTCFL-203ENST00000422109 KIF15Q9NS87 1388 aa18.74■□□□□ 0.59
CTCFL-203ENST00000422109 TMC1Q8TDI8 760 aa18.74■□□□□ 0.59
CTCFL-203ENST00000422109 PPP4R2Q9NY27 417 aa18.72■□□□□ 0.59
CTCFL-203ENST00000422109 PTPRGP23470 1445 aa18.72■□□□□ 0.59
CTCFL-203ENST00000422109 NUP160Q12769 1436 aa18.71■□□□□ 0.59
CTCFL-203ENST00000422109 BCORL1Q5H9F3 1711 aa18.71■□□□□ 0.59
CTCFL-203ENST00000422109 DHX29Q7Z478 1369 aaKnown RBP18.7■□□□□ 0.58
CTCFL-203ENST00000422109 ADGBQ8N7X0 1667 aa18.7■□□□□ 0.58
CTCFL-203ENST00000422109 ADGRL2O95490 1459 aa18.68■□□□□ 0.58
CTCFL-203ENST00000422109 CDC42BPAQ5VT25 1732 aa18.67■□□□□ 0.58
CTCFL-203ENST00000422109 MSH5O43196 834 aa18.67■□□□□ 0.58
CTCFL-203ENST00000422109 NBPF1Q3BBV0 1214 aa18.67■□□□□ 0.58
CTCFL-203ENST00000422109 ROCK2O75116 1388 aaKnown RBP18.66■□□□□ 0.58
CTCFL-203ENST00000422109 ABCC10Q5T3U5 1492 aa18.66■□□□□ 0.58
CTCFL-203ENST00000422109 MBD5Q9P267 1494 aa18.65■□□□□ 0.58
CTCFL-203ENST00000422109 CROCC2H7BZ55 1655 aa18.64■□□□□ 0.57
CTCFL-203ENST00000422109 ABCA8O94911 1581 aa18.63■□□□□ 0.57
CTCFL-203ENST00000422109 ADCY10Q96PN6 1610 aa18.63■□□□□ 0.57
CTCFL-203ENST00000422109 PNISRQ8TF01 805 aaKnown RBP18.61■□□□□ 0.57
CTCFL-203ENST00000422109 CC2D1BQ5T0F9 858 aaKnown RBP18.6■□□□□ 0.57
CTCFL-203ENST00000422109 ERICH6Q7L0X2 663 aa18.6■□□□□ 0.57
CTCFL-203ENST00000422109 KDM5CP41229 1560 aa18.6■□□□□ 0.57
CTCFL-203ENST00000422109 NUDCQ9Y266 331 aa18.6■□□□□ 0.57
CTCFL-203ENST00000422109 CCDC144AA2RUR9 1427 aa18.57■□□□□ 0.56
CTCFL-203ENST00000422109 CCDC136Q96JN2 1154 aa18.57■□□□□ 0.56
CTCFL-203ENST00000422109 RALGAPBQ86X10 1494 aa18.56■□□□□ 0.56
CTCFL-203ENST00000422109 ARHGAP5Q13017 1502 aa18.55■□□□□ 0.56
CTCFL-203ENST00000422109 MYT1LQ9UL68 1186 aa18.55■□□□□ 0.56
CTCFL-203ENST00000422109 CCDC141Q6ZP82 1450 aa18.55■□□□□ 0.56
CTCFL-203ENST00000422109 POLR1AO95602 1720 aaPredicted RBP18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms