RNA–Protein interactions for RNA: ENST00000421601.2

LINC00443-201, long intergenic non-protein coding RNA 443, humanhuman

TSL 3 BASIC

Gene LINC00443, Length 1,170 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00443-201ENST00000421601 ASXL2Q76L83 1435 aa18.07■□□□□ 0.48
LINC00443-201ENST00000421601 ITGAEP38570 1179 aa18.07■□□□□ 0.48
LINC00443-201ENST00000421601 GPATCH8Q9UKJ3 1502 aaKnown RBP18.07■□□□□ 0.48
LINC00443-201ENST00000421601 CFDP1Q9UEE9 299 aaPredicted RBP18.06■□□□□ 0.48
LINC00443-201ENST00000421601 MIA2Q96PC5 1412 aa18.06■□□□□ 0.48
LINC00443-201ENST00000421601 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.05■□□□□ 0.48
LINC00443-201ENST00000421601 WDR7Q9Y4E6 1490 aa18.05■□□□□ 0.48
LINC00443-201ENST00000421601 ZNF644Q9H582 1327 aaPredicted RBP18.02■□□□□ 0.48
LINC00443-201ENST00000421601 ZNF777Q9ULD5 760 aaPredicted RBP18.02■□□□□ 0.48
LINC00443-201ENST00000421601 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.02■□□□□ 0.47
LINC00443-201ENST00000421601 PTPN23Q9H3S7 1636 aa18.01■□□□□ 0.47
LINC00443-201ENST00000421601 TCOF1Q13428 1488 aaKnown RBP18■□□□□ 0.47
LINC00443-201ENST00000421601 DNAJC5Q9H3Z4 198 aa17.98■□□□□ 0.47
LINC00443-201ENST00000421601 TTC37Q6PGP7 1564 aa17.97■□□□□ 0.47
LINC00443-201ENST00000421601 CDC42BPAQ5VT25 1732 aa17.97■□□□□ 0.47
LINC00443-201ENST00000421601 ITSN2Q9NZM3 1697 aa17.96■□□□□ 0.47
LINC00443-201ENST00000421601 PLCH2O75038 1416 aa17.95■□□□□ 0.46
LINC00443-201ENST00000421601 MAPKBP1O60336 1514 aa17.93■□□□□ 0.46
LINC00443-201ENST00000421601 EFCAB2Q5VUJ9 269 aa17.93■□□□□ 0.46
LINC00443-201ENST00000421601 CAMSAP2Q08AD1 1489 aa17.92■□□□□ 0.46
LINC00443-201ENST00000421601 CDC42BPBQ9Y5S2 1711 aa17.92■□□□□ 0.46
LINC00443-201ENST00000421601 PTPRKQ15262 1439 aa17.91■□□□□ 0.46
LINC00443-201ENST00000421601 ARHGAP5Q13017 1502 aa17.91■□□□□ 0.46
LINC00443-201ENST00000421601 PREX2Q70Z35 1606 aa17.9■□□□□ 0.46
LINC00443-201ENST00000421601 HNRNPMP52272 730 aaKnown RBP eCLIP17.9■□□□□ 0.46
LINC00443-201ENST00000421601 ABCA9Q8IUA7 1624 aa17.9■□□□□ 0.46
LINC00443-201ENST00000421601 MYO5CQ9NQX4 1742 aa17.89■□□□□ 0.46
LINC00443-201ENST00000421601 PPP4R3CPQ6ZMV5 832 aa17.89■□□□□ 0.45
LINC00443-201ENST00000421601 CHIC2Q9UKJ5 165 aa17.89■□□□□ 0.45
LINC00443-201ENST00000421601 ABCC5O15440 1437 aa17.89■□□□□ 0.45
LINC00443-201ENST00000421601 DAPK1P53355 1430 aa17.87■□□□□ 0.45
LINC00443-201ENST00000421601 CD109Q6YHK3 1445 aa17.87■□□□□ 0.45
LINC00443-201ENST00000421601 FAM69CQ0P6D2 419 aa17.86■□□□□ 0.45
LINC00443-201ENST00000421601 RSPH4AQ5TD94 716 aa17.85■□□□□ 0.45
LINC00443-201ENST00000421601 POTEHQ6S545 545 aa17.85■□□□□ 0.45
LINC00443-201ENST00000421601 SAMD9LQ8IVG5 1584 aa17.85■□□□□ 0.45
LINC00443-201ENST00000421601 ARAP3Q8WWN8 1544 aa17.84■□□□□ 0.45
LINC00443-201ENST00000421601 RRP7BPQ9NSQ0 103 aa17.83■□□□□ 0.44
LINC00443-201ENST00000421601 RNF216Q9NWF9 866 aaPredicted RBP17.83■□□□□ 0.44
LINC00443-201ENST00000421601 DNMT1P26358 1616 aaKnown RBP17.83■□□□□ 0.44
LINC00443-201ENST00000421601 PLEKHH2Q8IVE3 1493 aa17.82■□□□□ 0.44
LINC00443-201ENST00000421601 MBD5Q9P267 1494 aa17.82■□□□□ 0.44
LINC00443-201ENST00000421601 SETD5Q9C0A6 1442 aa17.82■□□□□ 0.44
LINC00443-201ENST00000421601 KIAA1107Q9UPP5 1409 aa17.82■□□□□ 0.44
LINC00443-201ENST00000421601 TSPY4P0CV99 314 aa17.82■□□□□ 0.44
LINC00443-201ENST00000421601 TSPY10P0CW01 314 aa17.82■□□□□ 0.44
LINC00443-201ENST00000421601 GLI2P10070 1586 aa17.81■□□□□ 0.44
LINC00443-201ENST00000421601 FANCAO15360 1455 aa17.81■□□□□ 0.44
LINC00443-201ENST00000421601 AKNAQ7Z591 1439 aa17.8■□□□□ 0.44
LINC00443-201ENST00000421601 RAB3GAP2Q9H2M9 1393 aa17.79■□□□□ 0.44
LINC00443-201ENST00000421601 ARHGEF12Q9NZN5 1544 aa17.78■□□□□ 0.44
LINC00443-201ENST00000421601 ARHGEF5Q12774 1597 aa17.78■□□□□ 0.44
LINC00443-201ENST00000421601 ROCK1Q13464 1354 aa17.78■□□□□ 0.44
LINC00443-201ENST00000421601 SYCP2Q9BX26 1530 aa17.77■□□□□ 0.44
LINC00443-201ENST00000421601 HRCP23327 699 aa17.77■□□□□ 0.44
LINC00443-201ENST00000421601 HFM1A2PYH4 1435 aa17.77■□□□□ 0.44
LINC00443-201ENST00000421601 DIP2BQ9P265 1576 aa17.76■□□□□ 0.43
LINC00443-201ENST00000421601 NAIPQ13075 1403 aa17.76■□□□□ 0.43
LINC00443-201ENST00000421601 CCER1Q8TC90 406 aaPredicted RBP17.76■□□□□ 0.43
LINC00443-201ENST00000421601 CCDC141Q6ZP82 1450 aa17.75■□□□□ 0.43
LINC00443-201ENST00000421601 AFAP1Q8N556 730 aa17.75■□□□□ 0.43
LINC00443-201ENST00000421601 C9orf84Q5VXU9 1444 aa17.74■□□□□ 0.43
LINC00443-201ENST00000421601 SCAPERQ9BY12 1400 aa17.74■□□□□ 0.43
LINC00443-201ENST00000421601 TRAPPC8Q9Y2L5 1435 aa17.74■□□□□ 0.43
LINC00443-201ENST00000421601 ABCC1P33527 1531 aa17.74■□□□□ 0.43
LINC00443-201ENST00000421601 MAP3K4Q9Y6R4 1608 aa17.74■□□□□ 0.43
LINC00443-201ENST00000421601 CNKSR2Q8WXI2 1034 aa17.74■□□□□ 0.43
LINC00443-201ENST00000421601 ANKRD30AQ9BXX3 1397 aa17.74■□□□□ 0.43
LINC00443-201ENST00000421601 NCOA1Q15788 1441 aa17.73■□□□□ 0.43
LINC00443-201ENST00000421601 ADGRL1O94910 1474 aa17.73■□□□□ 0.43
LINC00443-201ENST00000421601 SHANK2Q9UPX8 1470 aa17.72■□□□□ 0.43
LINC00443-201ENST00000421601 CROCC2H7BZ55 1655 aa17.71■□□□□ 0.43
LINC00443-201ENST00000421601 ADGRL2O95490 1459 aa17.71■□□□□ 0.43
LINC00443-201ENST00000421601 NEO1Q92859 1461 aa17.7■□□□□ 0.42
LINC00443-201ENST00000421601 CFAP74Q9C0B2 1584 aa17.69■□□□□ 0.42
LINC00443-201ENST00000421601 SPAG9O60271 1321 aaKnown RBP17.69■□□□□ 0.42
LINC00443-201ENST00000421601 ADGBQ8N7X0 1667 aa17.67■□□□□ 0.42
LINC00443-201ENST00000421601 MAST1Q9Y2H9 1570 aa17.66■□□□□ 0.42
LINC00443-201ENST00000421601 KIF13AQ9H1H9 1805 aa17.65■□□□□ 0.42
LINC00443-201ENST00000421601 MYT1LQ9UL68 1186 aa17.65■□□□□ 0.42
LINC00443-201ENST00000421601 TSPOAP1O95153 1857 aa17.65■□□□□ 0.42
LINC00443-201ENST00000421601 DHX57Q6P158 1386 aaKnown RBP17.65■□□□□ 0.42
LINC00443-201ENST00000421601 KIF15Q9NS87 1388 aa17.65■□□□□ 0.42
LINC00443-201ENST00000421601 GCC2Q8IWJ2 1684 aa17.64■□□□□ 0.42
LINC00443-201ENST00000421601 RAPGEF3O95398 923 aa17.64■□□□□ 0.41
LINC00443-201ENST00000421601 TRHP20396 242 aaPredicted RBP17.64■□□□□ 0.41
LINC00443-201ENST00000421601 TRIM52Q96A61 297 aa17.64■□□□□ 0.41
LINC00443-201ENST00000421601 RTEL1-TNFRSF6BF6WH68 1400 aa17.64■□□□□ 0.41
LINC00443-201ENST00000421601 KDM6BO15054 1643 aa17.63■□□□□ 0.41
LINC00443-201ENST00000421601 TEX14Q8IWB6 1497 aa17.63■□□□□ 0.41
LINC00443-201ENST00000421601 ACIN1Q9UKV3 1341 aaKnown RBP17.62■□□□□ 0.41
LINC00443-201ENST00000421601 ANKRD50Q9ULJ7 1429 aa17.62■□□□□ 0.41
LINC00443-201ENST00000421601 DENND4BO75064 1496 aaPredicted RBP17.62■□□□□ 0.41
LINC00443-201ENST00000421601 PPRC1Q5VV67 1664 aaKnown RBP17.61■□□□□ 0.41
LINC00443-201ENST00000421601 POGZQ7Z3K3 1410 aa17.61■□□□□ 0.41
LINC00443-201ENST00000421601 ZNF518AQ6AHZ1 1483 aa17.61■□□□□ 0.41
LINC00443-201ENST00000421601 ZEB1P37275 1124 aaPredicted RBP17.58■□□□□ 0.4
LINC00443-201ENST00000421601 PLXNC1O60486 1568 aa17.57■□□□□ 0.4
LINC00443-201ENST00000421601 ATP7AQ04656 1500 aa17.56■□□□□ 0.4
LINC00443-201ENST00000421601 ZFYVE16Q7Z3T8 1539 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms