RNA–Protein interactions for RNA: ENST00000420709.5

PRAME-207, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS ALT2 TSL 2

Gene PRAME, Length 705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-207ENST00000420709 SCAPERQ9BY12 1400 aa21.14■□□□□ 0.98
PRAME-207ENST00000420709 MYO5CQ9NQX4 1742 aa21.14■□□□□ 0.97
PRAME-207ENST00000420709 POGZQ7Z3K3 1410 aa21.12■□□□□ 0.97
PRAME-207ENST00000420709 CDK11AQ9UQ88 783 aaPredicted RBP21.11■□□□□ 0.97
PRAME-207ENST00000420709 TROQ12816 1431 aaPredicted RBP21.1■□□□□ 0.97
PRAME-207ENST00000420709 PLPPR3Q6T4P5 718 aa21.09■□□□□ 0.97
PRAME-207ENST00000420709 PCF11O94913 1555 aaKnown RBP21.08■□□□□ 0.97
PRAME-207ENST00000420709 EFCAB2Q5VUJ9 269 aa21.08■□□□□ 0.97
PRAME-207ENST00000420709 MAGI2Q86UL8 1455 aa21.07■□□□□ 0.96
PRAME-207ENST00000420709 MLECQ14165 292 aa21.07■□□□□ 0.96
PRAME-207ENST00000420709 CLIP1P30622 1438 aa21.06■□□□□ 0.96
PRAME-207ENST00000420709 ARHGAP5Q13017 1502 aa21.06■□□□□ 0.96
PRAME-207ENST00000420709 LMTK3Q96Q04 1460 aa21.03■□□□□ 0.96
PRAME-207ENST00000420709 CASKIN1Q8WXD9 1431 aa21.02■□□□□ 0.96
PRAME-207ENST00000420709 FER1L4A9Z1Z3 1794 aa21.01■□□□□ 0.95
PRAME-207ENST00000420709 ATP10AO60312 1499 aa21.01■□□□□ 0.95
PRAME-207ENST00000420709 CDC42BPBQ9Y5S2 1711 aa21■□□□□ 0.95
PRAME-207ENST00000420709 C9orf84Q5VXU9 1444 aa20.99■□□□□ 0.95
PRAME-207ENST00000420709 CCDC18Q5T9S5 1454 aa20.99■□□□□ 0.95
PRAME-207ENST00000420709 ZNF518AQ6AHZ1 1483 aa20.99■□□□□ 0.95
PRAME-207ENST00000420709 AFAP1Q8N556 730 aa20.98■□□□□ 0.95
PRAME-207ENST00000420709 KDM5CP41229 1560 aa20.97■□□□□ 0.95
PRAME-207ENST00000420709 PREX2Q70Z35 1606 aa20.96■□□□□ 0.95
PRAME-207ENST00000420709 HSPA2P54652 639 aa20.96■□□□□ 0.95
PRAME-207ENST00000420709 MYT1LQ9UL68 1186 aa20.96■□□□□ 0.95
PRAME-207ENST00000420709 ARHGEF12Q9NZN5 1544 aa20.94■□□□□ 0.94
PRAME-207ENST00000420709 FYCO1Q9BQS8 1478 aa20.94■□□□□ 0.94
PRAME-207ENST00000420709 DIP2CQ9Y2E4 1556 aa20.93■□□□□ 0.94
PRAME-207ENST00000420709 ABCC1P33527 1531 aa20.92■□□□□ 0.94
PRAME-207ENST00000420709 CDC42BPAQ5VT25 1732 aa20.91■□□□□ 0.94
PRAME-207ENST00000420709 ABCA6Q8N139 1617 aa20.91■□□□□ 0.94
PRAME-207ENST00000420709 TRAPPC8Q9Y2L5 1435 aa20.91■□□□□ 0.94
PRAME-207ENST00000420709 ITSN2Q9NZM3 1697 aa20.9■□□□□ 0.94
PRAME-207ENST00000420709 CEBPAP49715 358 aaPredicted RBP20.88■□□□□ 0.93
PRAME-207ENST00000420709 MLH3Q9UHC1 1453 aa20.86■□□□□ 0.93
PRAME-207ENST00000420709 ZNF777Q9ULD5 760 aaPredicted RBP20.85■□□□□ 0.93
PRAME-207ENST00000420709 FBXO41Q8TF61 875 aa20.84■□□□□ 0.93
PRAME-207ENST00000420709 REREQ9P2R6 1566 aa20.84■□□□□ 0.93
PRAME-207ENST00000420709 SAMD9LQ8IVG5 1584 aa20.83■□□□□ 0.92
PRAME-207ENST00000420709 KIDINS220Q9ULH0 1771 aa20.82■□□□□ 0.92
PRAME-207ENST00000420709 PREX1Q8TCU6 1659 aa20.82■□□□□ 0.92
PRAME-207ENST00000420709 SYCP2Q9BX26 1530 aa20.81■□□□□ 0.92
PRAME-207ENST00000420709 GPATCH8Q9UKJ3 1502 aaKnown RBP20.8■□□□□ 0.92
PRAME-207ENST00000420709 AGLP35573 1532 aa20.78■□□□□ 0.92
PRAME-207ENST00000420709 HNRNPMP52272 730 aaKnown RBP eCLIP20.77■□□□□ 0.923e-11■□□□□ 9.5
PRAME-207ENST00000420709 C3P01024 1663 aa20.76■□□□□ 0.91
PRAME-207ENST00000420709 MTUS2Q5JR59 1369 aa20.74■□□□□ 0.91
PRAME-207ENST00000420709 CCNB3Q8WWL7 1395 aa20.73■□□□□ 0.91
PRAME-207ENST00000420709 UHRF1BP1Q6BDS2 1440 aa20.73■□□□□ 0.91
PRAME-207ENST00000420709 ESF1Q9H501 851 aaKnown RBP20.73■□□□□ 0.91
PRAME-207ENST00000420709 CFDP1Q9UEE9 299 aaPredicted RBP20.73■□□□□ 0.91
PRAME-207ENST00000420709 SPAG9O60271 1321 aaKnown RBP20.73■□□□□ 0.91
PRAME-207ENST00000420709 SETD1BQ9UPS6 1966 aaKnown RBP20.71■□□□□ 0.91
PRAME-207ENST00000420709 CEP162Q5TB80 1403 aa20.7■□□□□ 0.9
PRAME-207ENST00000420709 SUPT6HQ7KZ85 1726 aaKnown RBP20.7■□□□□ 0.9
PRAME-207ENST00000420709 ATP7AQ04656 1500 aa20.69■□□□□ 0.9
PRAME-207ENST00000420709 STRCQ7RTU9 1775 aa20.69■□□□□ 0.9
PRAME-207ENST00000420709 TIAM1Q13009 1591 aa20.68■□□□□ 0.9
PRAME-207ENST00000420709 KIAA1107Q9UPP5 1409 aa20.68■□□□□ 0.9
PRAME-207ENST00000420709 PLEKHH2Q8IVE3 1493 aa20.68■□□□□ 0.9
PRAME-207ENST00000420709 EHBP1L1Q8N3D4 1523 aa20.68■□□□□ 0.9
PRAME-207ENST00000420709 INO80Q9ULG1 1556 aaPredicted RBP20.68■□□□□ 0.9
PRAME-207ENST00000420709 CERKQ8TCT0 537 aa20.66■□□□□ 0.9
PRAME-207ENST00000420709 ZNF644Q9H582 1327 aaPredicted RBP20.66■□□□□ 0.9
PRAME-207ENST00000420709 CNTLNQ9NXG0 1405 aa20.65■□□□□ 0.9
PRAME-207ENST00000420709 A2MP01023 1474 aa20.63■□□□□ 0.89
PRAME-207ENST00000420709 PLXNC1O60486 1568 aa20.63■□□□□ 0.89
PRAME-207ENST00000420709 MROH2AA6NES4 1674 aa20.61■□□□□ 0.89
PRAME-207ENST00000420709 CLTCQ00610 1675 aaKnown RBP20.61■□□□□ 0.89
PRAME-207ENST00000420709 ZMYM3Q14202 1370 aa20.59■□□□□ 0.89
PRAME-207ENST00000420709 MBD5Q9P267 1494 aa20.58■□□□□ 0.89
PRAME-207ENST00000420709 GGT6Q6P531 493 aa20.58■□□□□ 0.89
PRAME-207ENST00000420709 DMRT2Q9Y5R5 561 aa20.58■□□□□ 0.89
PRAME-207ENST00000420709 ADGBQ8N7X0 1667 aa20.57■□□□□ 0.88
PRAME-207ENST00000420709 NCOA2Q15596 1464 aa20.56■□□□□ 0.88
PRAME-207ENST00000420709 NPATQ14207 1427 aa20.54■□□□□ 0.88
PRAME-207ENST00000420709 LOC105371045A0A1W2PR82 267 aa20.54■□□□□ 0.88
PRAME-207ENST00000420709 NCOA1Q15788 1441 aa20.53■□□□□ 0.88
PRAME-207ENST00000420709 PTPRTO14522 1441 aa20.53■□□□□ 0.88
PRAME-207ENST00000420709 CAMSAP2Q08AD1 1489 aa20.52■□□□□ 0.88
PRAME-207ENST00000420709 CAMSAP1Q5T5Y3 1602 aa20.52■□□□□ 0.88
PRAME-207ENST00000420709 MYO3AQ8NEV4 1616 aa20.5■□□□□ 0.87
PRAME-207ENST00000420709 RTEL1-TNFRSF6BF6WH68 1400 aa20.5■□□□□ 0.87
PRAME-207ENST00000420709 PTPRKQ15262 1439 aa20.5■□□□□ 0.87
PRAME-207ENST00000420709 CCDC141Q6ZP82 1450 aa20.5■□□□□ 0.87
PRAME-207ENST00000420709 DHX29Q7Z478 1369 aaKnown RBP20.47■□□□□ 0.87
PRAME-207ENST00000420709 ZNF142P52746 1687 aaPredicted RBP20.47■□□□□ 0.87
PRAME-207ENST00000420709 NCKAP5LQ9HCH0 1330 aa20.47■□□□□ 0.87
PRAME-207ENST00000420709 VPS8Q8N3P4 1428 aa20.46■□□□□ 0.87
PRAME-207ENST00000420709 CEP170BQ9Y4F5 1589 aaPredicted RBP20.46■□□□□ 0.87
PRAME-207ENST00000420709 LRRC9Q6ZRR7 1453 aa20.44■□□□□ 0.86
PRAME-207ENST00000420709 KIF3BO15066 747 aa20.44■□□□□ 0.86
PRAME-207ENST00000420709 LTBP4Q8N2S1 1624 aa20.44■□□□□ 0.86
PRAME-207ENST00000420709 PPP6R1Q9UPN7 881 aa20.43■□□□□ 0.86
PRAME-207ENST00000420709 ARHGEF5Q12774 1597 aa20.41■□□□□ 0.86
PRAME-207ENST00000420709 KANK4Q5T7N3 995 aaPredicted RBP20.39■□□□□ 0.85
PRAME-207ENST00000420709 RSPH4AQ5TD94 716 aa20.39■□□□□ 0.85
PRAME-207ENST00000420709 KDM5DQ9BY66 1539 aa20.38■□□□□ 0.85
PRAME-207ENST00000420709 PLA2R1Q13018 1463 aa20.38■□□□□ 0.85
PRAME-207ENST00000420709 FBXO31Q5XUX0 539 aaPredicted RBP20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms