RNA–Protein interactions for RNA: ENST00000420567.7

VAT1-202, Transcript of vesicle amine transport 1, humanhuman

TSL 2 BASIC

Gene VAT1, Length 1,069 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-202ENST00000420567 PREX2Q70Z35 1606 aa25.12■■□□□ 1.61
VAT1-202ENST00000420567 SCAPERQ9BY12 1400 aa25.12■■□□□ 1.61
VAT1-202ENST00000420567 CDC42BPBQ9Y5S2 1711 aa25.08■■□□□ 1.61
VAT1-202ENST00000420567 GPATCH8Q9UKJ3 1502 aaKnown RBP25.07■■□□□ 1.6
VAT1-202ENST00000420567 POGZQ7Z3K3 1410 aa25.07■■□□□ 1.6
VAT1-202ENST00000420567 CCNB3Q8WWL7 1395 aa25.06■■□□□ 1.6
VAT1-202ENST00000420567 CDC42BPAQ5VT25 1732 aa25.06■■□□□ 1.6
VAT1-202ENST00000420567 RICTORQ6R327 1708 aa25.06■■□□□ 1.6
VAT1-202ENST00000420567 LRRC9Q6ZRR7 1453 aa25.02■■□□□ 1.6
VAT1-202ENST00000420567 ZNF777Q9ULD5 760 aaPredicted RBP25.02■■□□□ 1.6
VAT1-202ENST00000420567 NCOA2Q15596 1464 aa25.01■■□□□ 1.59
VAT1-202ENST00000420567 ABCC1P33527 1531 aa25.01■■□□□ 1.59
VAT1-202ENST00000420567 MAP3K1Q13233 1512 aa25.01■■□□□ 1.59
VAT1-202ENST00000420567 ZMYM4Q5VZL5 1548 aa25.01■■□□□ 1.59
VAT1-202ENST00000420567 KANK4Q5T7N3 995 aaPredicted RBP24.99■■□□□ 1.59
VAT1-202ENST00000420567 SUPT6HQ7KZ85 1726 aaKnown RBP24.98■■□□□ 1.59
VAT1-202ENST00000420567 ARHGEF40Q8TER5 1519 aa24.98■■□□□ 1.59
VAT1-202ENST00000420567 ARHGEF12Q9NZN5 1544 aa24.98■■□□□ 1.59
VAT1-202ENST00000420567 KDM4FA0A1W2PPD8 638 aa24.98■■□□□ 1.59
VAT1-202ENST00000420567 CFDP1Q9UEE9 299 aaPredicted RBP24.98■■□□□ 1.59
VAT1-202ENST00000420567 SAMD9LQ8IVG5 1584 aa24.97■■□□□ 1.59
VAT1-202ENST00000420567 ZFYVE16Q7Z3T8 1539 aa24.96■■□□□ 1.59
VAT1-202ENST00000420567 ZNF518AQ6AHZ1 1483 aa24.96■■□□□ 1.59
VAT1-202ENST00000420567 YEATS2Q9ULM3 1422 aa24.96■■□□□ 1.59
VAT1-202ENST00000420567 APLP2Q06481 763 aa24.96■■□□□ 1.59
VAT1-202ENST00000420567 AEBP2Q6ZN18 517 aaPredicted RBP24.96■■□□□ 1.59
VAT1-202ENST00000420567 AFAP1Q8N556 730 aa24.95■■□□□ 1.58
VAT1-202ENST00000420567 TRAPPC8Q9Y2L5 1435 aa24.95■■□□□ 1.58
VAT1-202ENST00000420567 ITSN2Q9NZM3 1697 aa24.94■■□□□ 1.58
VAT1-202ENST00000420567 SYCP2Q9BX26 1530 aa24.93■■□□□ 1.58
VAT1-202ENST00000420567 MAGI2Q86UL8 1455 aa24.93■■□□□ 1.58
VAT1-202ENST00000420567 KDM5CP41229 1560 aa24.93■■□□□ 1.58
VAT1-202ENST00000420567 ZNF644Q9H582 1327 aaPredicted RBP24.88■■□□□ 1.57
VAT1-202ENST00000420567 HNRNPMP52272 730 aaKnown RBP eCLIP24.88■■□□□ 1.57
VAT1-202ENST00000420567 MYT1LQ9UL68 1186 aa24.88■■□□□ 1.57
VAT1-202ENST00000420567 PLEKHH2Q8IVE3 1493 aa24.88■■□□□ 1.57
VAT1-202ENST00000420567 HECW2Q9P2P5 1572 aa24.87■■□□□ 1.57
VAT1-202ENST00000420567 ARID4BQ4LE39 1312 aaPredicted RBP24.86■■□□□ 1.57
VAT1-202ENST00000420567 KIAA1107Q9UPP5 1409 aa24.86■■□□□ 1.57
VAT1-202ENST00000420567 MLH3Q9UHC1 1453 aa24.83■■□□□ 1.57
VAT1-202ENST00000420567 CAMSAP2Q08AD1 1489 aa24.83■■□□□ 1.56
VAT1-202ENST00000420567 ATP10AO60312 1499 aa24.82■■□□□ 1.56
VAT1-202ENST00000420567 C9orf84Q5VXU9 1444 aa24.81■■□□□ 1.56
VAT1-202ENST00000420567 DIP2CQ9Y2E4 1556 aa24.8■■□□□ 1.56
VAT1-202ENST00000420567 SIGLEC1Q9BZZ2 1709 aa24.8■■□□□ 1.56
VAT1-202ENST00000420567 MBD5Q9P267 1494 aa24.79■■□□□ 1.56
VAT1-202ENST00000420567 ABCA6Q8N139 1617 aa24.79■■□□□ 1.56
VAT1-202ENST00000420567 MYOM3Q5VTT5 1437 aa24.78■■□□□ 1.56
VAT1-202ENST00000420567 SPAG9O60271 1321 aaKnown RBP24.78■■□□□ 1.56
VAT1-202ENST00000420567 BCORL1Q5H9F3 1711 aa24.75■■□□□ 1.55
VAT1-202ENST00000420567 KIDINS220Q9ULH0 1771 aa24.75■■□□□ 1.55
VAT1-202ENST00000420567 ATP7AQ04656 1500 aa24.73■■□□□ 1.55
VAT1-202ENST00000420567 ADAMTSL3P82987 1691 aa24.72■■□□□ 1.55
VAT1-202ENST00000420567 INO80Q9ULG1 1556 aaPredicted RBP24.72■■□□□ 1.55
VAT1-202ENST00000420567 MIA2Q96PC5 1412 aa24.72■■□□□ 1.55
VAT1-202ENST00000420567 MLECQ14165 292 aa24.72■■□□□ 1.55
VAT1-202ENST00000420567 CCDC141Q6ZP82 1450 aa24.71■■□□□ 1.55
VAT1-202ENST00000420567 MADDQ8WXG6 1647 aa24.7■■□□□ 1.54
VAT1-202ENST00000420567 REREQ9P2R6 1566 aa24.7■■□□□ 1.54
VAT1-202ENST00000420567 ARHGEF5Q12774 1597 aa24.66■■□□□ 1.54
VAT1-202ENST00000420567 FGD6Q6ZV73 1430 aa24.64■■□□□ 1.54
VAT1-202ENST00000420567 PTPRMP28827 1452 aa24.64■■□□□ 1.53
VAT1-202ENST00000420567 RSPH4AQ5TD94 716 aa24.63■■□□□ 1.53
VAT1-202ENST00000420567 RTEL1-TNFRSF6BF6WH68 1400 aa24.62■■□□□ 1.53
VAT1-202ENST00000420567 AGLP35573 1532 aa24.62■■□□□ 1.53
VAT1-202ENST00000420567 PTPN23Q9H3S7 1636 aa24.62■■□□□ 1.53
VAT1-202ENST00000420567 PPARGC1BQ86YN6 1023 aaKnown RBP24.62■■□□□ 1.53
VAT1-202ENST00000420567 A2MP01023 1474 aa24.61■■□□□ 1.53
VAT1-202ENST00000420567 RIMS1Q86UR5 1692 aaKnown RBP24.61■■□□□ 1.53
VAT1-202ENST00000420567 TCOF1Q13428 1488 aaKnown RBP24.58■■□□□ 1.53
VAT1-202ENST00000420567 TSPY4P0CV99 314 aa24.58■■□□□ 1.53
VAT1-202ENST00000420567 TSPY10P0CW01 314 aa24.58■■□□□ 1.53
VAT1-202ENST00000420567 PLXNC1O60486 1568 aa24.58■■□□□ 1.52
VAT1-202ENST00000420567 PLPPR3Q6T4P5 718 aa24.56■■□□□ 1.52
VAT1-202ENST00000420567 ADGBQ8N7X0 1667 aa24.55■■□□□ 1.52
VAT1-202ENST00000420567 FER1L4A9Z1Z3 1794 aa24.54■■□□□ 1.52
VAT1-202ENST00000420567 MAST1Q9Y2H9 1570 aa24.53■■□□□ 1.52
VAT1-202ENST00000420567 ABCC5O15440 1437 aa24.52■■□□□ 1.52
VAT1-202ENST00000420567 DHX29Q7Z478 1369 aaKnown RBP24.51■■□□□ 1.51
VAT1-202ENST00000420567 DAPK1P53355 1430 aa24.51■■□□□ 1.51
VAT1-202ENST00000420567 FAM50AQ14320 339 aaKnown RBP24.5■■□□□ 1.51
VAT1-202ENST00000420567 DNMT1P26358 1616 aaKnown RBP24.49■■□□□ 1.51
VAT1-202ENST00000420567 SHANK2Q9UPX8 1470 aa24.48■■□□□ 1.51
VAT1-202ENST00000420567 CROCC2H7BZ55 1655 aa24.47■■□□□ 1.51
VAT1-202ENST00000420567 ESF1Q9H501 851 aaKnown RBP24.46■■□□□ 1.51
VAT1-202ENST00000420567 GGT6Q6P531 493 aa24.45■■□□□ 1.5
VAT1-202ENST00000420567 CEBPAP49715 358 aaPredicted RBP24.44■■□□□ 1.5
VAT1-202ENST00000420567 KIF3BO15066 747 aa24.42■■□□□ 1.5
VAT1-202ENST00000420567 CHIC2Q9UKJ5 165 aa24.41■■□□□ 1.5
VAT1-202ENST00000420567 CNTLNQ9NXG0 1405 aa24.4■■□□□ 1.5
VAT1-202ENST00000420567 KIF15Q9NS87 1388 aa24.4■■□□□ 1.5
VAT1-202ENST00000420567 RRP7BPQ9NSQ0 103 aa24.38■■□□□ 1.49
VAT1-202ENST00000420567 DUOX2Q9NRD8 1548 aa24.36■■□□□ 1.49
VAT1-202ENST00000420567 CLTCQ00610 1675 aaKnown RBP24.35■■□□□ 1.49
VAT1-202ENST00000420567 ANKRD30AQ9BXX3 1397 aa24.35■■□□□ 1.49
VAT1-202ENST00000420567 C3P01024 1663 aa24.34■■□□□ 1.49
VAT1-202ENST00000420567 PTPRKQ15262 1439 aa24.32■■□□□ 1.48
VAT1-202ENST00000420567 ADGRL2O95490 1459 aa24.32■■□□□ 1.48
VAT1-202ENST00000420567 LMTK3Q96Q04 1460 aa24.32■■□□□ 1.48
VAT1-202ENST00000420567 EIF2AK4Q9P2K8 1649 aaKnown RBP24.32■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms