RNA–Protein interactions for RNA: ENST00000420330.1

AC009404.1-201, humanhuman

TSL 3 BASIC

Gene AC009404.1, Length 3,090 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009404.1-201ENST00000420330 TSHZ2Q9NRE2 1034 aa9.6□□□□□ -0.87
AC009404.1-201ENST00000420330 CDK13Q14004 1512 aaKnown RBP9.59□□□□□ -0.88
AC009404.1-201ENST00000420330 FRMPD1Q5SYB0 1578 aa9.58□□□□□ -0.88
AC009404.1-201ENST00000420330 TTC37Q6PGP7 1564 aa9.58□□□□□ -0.88
AC009404.1-201ENST00000420330 FANCAO15360 1455 aa9.57□□□□□ -0.88
AC009404.1-201ENST00000420330 DENND4BO75064 1496 aaPredicted RBP9.57□□□□□ -0.88
AC009404.1-201ENST00000420330 CDK11AQ9UQ88 783 aaPredicted RBP9.57□□□□□ -0.88
AC009404.1-201ENST00000420330 AKNAQ7Z591 1439 aa9.56□□□□□ -0.88
AC009404.1-201ENST00000420330 ZMYM4Q5VZL5 1548 aa9.56□□□□□ -0.88
AC009404.1-201ENST00000420330 ARHGEF40Q8TER5 1519 aa9.56□□□□□ -0.88
AC009404.1-201ENST00000420330 RICTORQ6R327 1708 aa9.56□□□□□ -0.88
AC009404.1-201ENST00000420330 CCDC18Q5T9S5 1454 aa9.56□□□□□ -0.88
AC009404.1-201ENST00000420330 KIF14Q15058 1648 aa9.55□□□□□ -0.88
AC009404.1-201ENST00000420330 CLIP1P30622 1438 aa9.55□□□□□ -0.88
AC009404.1-201ENST00000420330 PLCH2O75038 1416 aa9.55□□□□□ -0.88
AC009404.1-201ENST00000420330 TROQ12816 1431 aaPredicted RBP9.55□□□□□ -0.88
AC009404.1-201ENST00000420330 MYO5CQ9NQX4 1742 aa9.54□□□□□ -0.88
AC009404.1-201ENST00000420330 CASKIN1Q8WXD9 1431 aa9.54□□□□□ -0.88
AC009404.1-201ENST00000420330 MAGI2Q86UL8 1455 aa9.54□□□□□ -0.88
AC009404.1-201ENST00000420330 ADAMTSL3P82987 1691 aa9.53□□□□□ -0.88
AC009404.1-201ENST00000420330 RAPGEF3O95398 923 aa9.53□□□□□ -0.88
AC009404.1-201ENST00000420330 FYCO1Q9BQS8 1478 aa9.53□□□□□ -0.88
AC009404.1-201ENST00000420330 PCF11O94913 1555 aaKnown RBP9.53□□□□□ -0.88
AC009404.1-201ENST00000420330 EHMT2Q96KQ7 1210 aa9.52□□□□□ -0.89
AC009404.1-201ENST00000420330 BCORL1Q5H9F3 1711 aa9.52□□□□□ -0.89
AC009404.1-201ENST00000420330 ZFYVE16Q7Z3T8 1539 aa9.52□□□□□ -0.89
AC009404.1-201ENST00000420330 POGZQ7Z3K3 1410 aa9.52□□□□□ -0.89
AC009404.1-201ENST00000420330 LRRIQ1Q96JM4 1722 aa9.51□□□□□ -0.89
AC009404.1-201ENST00000420330 ATP1B4Q9UN42 357 aaPredicted RBP9.51□□□□□ -0.89
AC009404.1-201ENST00000420330 SUPT16HQ9Y5B9 1047 aaKnown RBP9.51□□□□□ -0.89
AC009404.1-201ENST00000420330 YTHDC1Q96MU7 727 aaKnown RBP9.5□□□□□ -0.89
AC009404.1-201ENST00000420330 EFCAB2Q5VUJ9 269 aa9.5□□□□□ -0.89
AC009404.1-201ENST00000420330 HECW2Q9P2P5 1572 aa9.5□□□□□ -0.89
AC009404.1-201ENST00000420330 SLC24A1O60721 1099 aa9.49□□□□□ -0.89
AC009404.1-201ENST00000420330 SCAPERQ9BY12 1400 aa9.49□□□□□ -0.89
AC009404.1-201ENST00000420330 ARHGAP5Q13017 1502 aa9.48□□□□□ -0.89
AC009404.1-201ENST00000420330 PREX2Q70Z35 1606 aa9.48□□□□□ -0.89
AC009404.1-201ENST00000420330 PTPRMP28827 1452 aa9.48□□□□□ -0.89
AC009404.1-201ENST00000420330 ZNF518AQ6AHZ1 1483 aa9.48□□□□□ -0.89
AC009404.1-201ENST00000420330 KDM5CP41229 1560 aa9.47□□□□□ -0.89
AC009404.1-201ENST00000420330 MADDQ8WXG6 1647 aa9.47□□□□□ -0.89
AC009404.1-201ENST00000420330 ARID4BQ4LE39 1312 aaPredicted RBP9.46□□□□□ -0.9
AC009404.1-201ENST00000420330 MIER1Q8N108 512 aa9.46□□□□□ -0.9
AC009404.1-201ENST00000420330 C9orf84Q5VXU9 1444 aa9.46□□□□□ -0.9
AC009404.1-201ENST00000420330 YEATS2Q9ULM3 1422 aa9.45□□□□□ -0.9
AC009404.1-201ENST00000420330 ATP10AO60312 1499 aa9.45□□□□□ -0.9
AC009404.1-201ENST00000420330 CDC42BPBQ9Y5S2 1711 aa9.45□□□□□ -0.9
AC009404.1-201ENST00000420330 ABCC1P33527 1531 aa9.45□□□□□ -0.9
AC009404.1-201ENST00000420330 REREQ9P2R6 1566 aa9.45□□□□□ -0.9
AC009404.1-201ENST00000420330 RIMS1Q86UR5 1692 aaKnown RBP9.43□□□□□ -0.9
AC009404.1-201ENST00000420330 ITSN2Q9NZM3 1697 aa9.43□□□□□ -0.9
AC009404.1-201ENST00000420330 POTEHQ6S545 545 aa9.43□□□□□ -0.9
AC009404.1-201ENST00000420330 MLH3Q9UHC1 1453 aa9.43□□□□□ -0.9
AC009404.1-201ENST00000420330 CCER1Q8TC90 406 aaPredicted RBP9.42□□□□□ -0.9
AC009404.1-201ENST00000420330 DMRT2Q9Y5R5 561 aa9.42□□□□□ -0.9
AC009404.1-201ENST00000420330 CDC42BPAQ5VT25 1732 aa9.42□□□□□ -0.9
AC009404.1-201ENST00000420330 ZNF316A6NFI3 1004 aaPredicted RBP9.42□□□□□ -0.9
AC009404.1-201ENST00000420330 ARHGEF12Q9NZN5 1544 aa9.42□□□□□ -0.9
AC009404.1-201ENST00000420330 SIGLEC1Q9BZZ2 1709 aa9.41□□□□□ -0.9
AC009404.1-201ENST00000420330 DIP2CQ9Y2E4 1556 aa9.41□□□□□ -0.9
AC009404.1-201ENST00000420330 FER1L4A9Z1Z3 1794 aa9.41□□□□□ -0.9
AC009404.1-201ENST00000420330 PLEKHH2Q8IVE3 1493 aa9.41□□□□□ -0.9
AC009404.1-201ENST00000420330 EHBP1L1Q8N3D4 1523 aa9.4□□□□□ -0.9
AC009404.1-201ENST00000420330 CEP162Q5TB80 1403 aa9.4□□□□□ -0.9
AC009404.1-201ENST00000420330 AGLP35573 1532 aa9.4□□□□□ -0.9
AC009404.1-201ENST00000420330 CLSPNQ9HAW4 1339 aa9.4□□□□□ -0.91
AC009404.1-201ENST00000420330 ABCA6Q8N139 1617 aa9.39□□□□□ -0.91
AC009404.1-201ENST00000420330 ANO8Q9HCE9 1232 aaPredicted RBP9.39□□□□□ -0.91
AC009404.1-201ENST00000420330 GPATCH8Q9UKJ3 1502 aaKnown RBP9.39□□□□□ -0.91
AC009404.1-201ENST00000420330 KIAA1107Q9UPP5 1409 aa9.39□□□□□ -0.91
AC009404.1-201ENST00000420330 MTUS2Q5JR59 1369 aa9.39□□□□□ -0.91
AC009404.1-201ENST00000420330 SAMD9LQ8IVG5 1584 aa9.38□□□□□ -0.91
AC009404.1-201ENST00000420330 PPP6R1Q9UPN7 881 aa9.38□□□□□ -0.91
AC009404.1-201ENST00000420330 TRAPPC8Q9Y2L5 1435 aa9.38□□□□□ -0.91
AC009404.1-201ENST00000420330 LMTK3Q96Q04 1460 aa9.38□□□□□ -0.91
AC009404.1-201ENST00000420330 AFAP1Q8N556 730 aa9.37□□□□□ -0.91
AC009404.1-201ENST00000420330 CCNB3Q8WWL7 1395 aa9.37□□□□□ -0.91
AC009404.1-201ENST00000420330 SYCP2Q9BX26 1530 aa9.36□□□□□ -0.91
AC009404.1-201ENST00000420330 KIDINS220Q9ULH0 1771 aa9.36□□□□□ -0.91
AC009404.1-201ENST00000420330 TIAM1Q13009 1591 aa9.35□□□□□ -0.91
AC009404.1-201ENST00000420330 PLPPR3Q6T4P5 718 aa9.35□□□□□ -0.91
AC009404.1-201ENST00000420330 MYT1LQ9UL68 1186 aa9.35□□□□□ -0.91
AC009404.1-201ENST00000420330 INO80Q9ULG1 1556 aaPredicted RBP9.34□□□□□ -0.91
AC009404.1-201ENST00000420330 MLECQ14165 292 aa9.34□□□□□ -0.91
AC009404.1-201ENST00000420330 CFDP1Q9UEE9 299 aaPredicted RBP9.34□□□□□ -0.91
AC009404.1-201ENST00000420330 PREX1Q8TCU6 1659 aa9.34□□□□□ -0.91
AC009404.1-201ENST00000420330 ATP7AQ04656 1500 aa9.34□□□□□ -0.91
AC009404.1-201ENST00000420330 CNTLNQ9NXG0 1405 aa9.34□□□□□ -0.91
AC009404.1-201ENST00000420330 SUPT6HQ7KZ85 1726 aaKnown RBP9.33□□□□□ -0.92
AC009404.1-201ENST00000420330 SPAG9O60271 1321 aaKnown RBP9.33□□□□□ -0.92
AC009404.1-201ENST00000420330 VPS8Q8N3P4 1428 aa9.33□□□□□ -0.92
AC009404.1-201ENST00000420330 ZNF777Q9ULD5 760 aaPredicted RBP9.32□□□□□ -0.92
AC009404.1-201ENST00000420330 MAP3K1Q13233 1512 aa9.32□□□□□ -0.92
AC009404.1-201ENST00000420330 PLXNC1O60486 1568 aa9.32□□□□□ -0.92
AC009404.1-201ENST00000420330 MROH2AA6NES4 1674 aa9.31□□□□□ -0.92
AC009404.1-201ENST00000420330 ADGBQ8N7X0 1667 aa9.31□□□□□ -0.92
AC009404.1-201ENST00000420330 RTEL1-TNFRSF6BF6WH68 1400 aa9.3□□□□□ -0.92
AC009404.1-201ENST00000420330 ADRA2BP18089 450 aa9.3□□□□□ -0.92
AC009404.1-201ENST00000420330 NCOA2Q15596 1464 aa9.3□□□□□ -0.92
AC009404.1-201ENST00000420330 A2MP01023 1474 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms