RNA–Protein interactions for RNA: ENST00000419314.5

CCT6P3-201, Transcript of chaperonin containing TCP1 subunit 6 pseudogene 3, humanhuman

TSL 1 (best) BASIC

Gene CCT6P3, Length 3,702 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT6P3-201ENST00000419314 L3MBTL2Q969R5 705 aa19.41■□□□□ 0.7
CCT6P3-201ENST00000419314 NUP153P49790 1475 aaKnown RBP19.41■□□□□ 0.7
CCT6P3-201ENST00000419314 MAGI3Q5TCQ9 1506 aa19.41■□□□□ 0.7
CCT6P3-201ENST00000419314 TROQ12816 1431 aaPredicted RBP19.4■□□□□ 0.7
CCT6P3-201ENST00000419314 PKD2Q13563 968 aa19.4■□□□□ 0.7
CCT6P3-201ENST00000419314 PTPN23Q9H3S7 1636 aa19.39■□□□□ 0.7
CCT6P3-201ENST00000419314 MAPKBP1O60336 1514 aa19.38■□□□□ 0.69
CCT6P3-201ENST00000419314 MIA2Q96PC5 1412 aa19.38■□□□□ 0.69
CCT6P3-201ENST00000419314 EIF4G2P78344 907 aaKnown RBP eCLIP19.37■□□□□ 0.69
CCT6P3-201ENST00000419314 KIAA0556O60303 1618 aa19.37■□□□□ 0.69
CCT6P3-201ENST00000419314 ANKRD30AQ9BXX3 1397 aa19.34■□□□□ 0.69
CCT6P3-201ENST00000419314 RGL3Q3MIN7 710 aa19.34■□□□□ 0.69
CCT6P3-201ENST00000419314 NPM1P06748 294 aaKnown RBP eCLIP19.33■□□□□ 0.69
CCT6P3-201ENST00000419314 NUP155O75694 1391 aa19.33■□□□□ 0.68
CCT6P3-201ENST00000419314 CEP170Q5SW79 1584 aa19.32■□□□□ 0.68
CCT6P3-201ENST00000419314 HSPA5P11021 654 aaKnown RBP19.32■□□□□ 0.68
CCT6P3-201ENST00000419314 DAPK1P53355 1430 aa19.31■□□□□ 0.68
CCT6P3-201ENST00000419314 NUP160Q12769 1436 aa19.3■□□□□ 0.68
CCT6P3-201ENST00000419314 ABCC5O15440 1437 aa19.29■□□□□ 0.68
CCT6P3-201ENST00000419314 RAPGEF6Q8TEU7 1601 aa19.29■□□□□ 0.68
CCT6P3-201ENST00000419314 ARHGEF11O15085 1522 aa19.26■□□□□ 0.67
CCT6P3-201ENST00000419314 ATP10BO94823 1461 aa19.24■□□□□ 0.67
CCT6P3-201ENST00000419314 EFCAB2Q5VUJ9 269 aa19.23■□□□□ 0.67
CCT6P3-201ENST00000419314 GPATCH8Q9UKJ3 1502 aaKnown RBP19.22■□□□□ 0.67
CCT6P3-201ENST00000419314 DCAF11Q8TEB1 546 aa19.21■□□□□ 0.67
CCT6P3-201ENST00000419314 CAMSAP2Q08AD1 1489 aa19.2■□□□□ 0.66
CCT6P3-201ENST00000419314 ANKRD50Q9ULJ7 1429 aa19.2■□□□□ 0.66
CCT6P3-201ENST00000419314 LRRIQ1Q96JM4 1722 aa19.19■□□□□ 0.66
CCT6P3-201ENST00000419314 KIF15Q9NS87 1388 aa19.18■□□□□ 0.66
CCT6P3-201ENST00000419314 BCANQ96GW7 911 aa19.18■□□□□ 0.66
CCT6P3-201ENST00000419314 NEFLP07196 543 aa19.18■□□□□ 0.66
CCT6P3-201ENST00000419314 TCOF1Q13428 1488 aaKnown RBP19.18■□□□□ 0.66
CCT6P3-201ENST00000419314 CARD11Q9BXL7 1154 aa19.16■□□□□ 0.66
CCT6P3-201ENST00000419314 ROCK1Q13464 1354 aa19.15■□□□□ 0.66
CCT6P3-201ENST00000419314 NBPF8Q3BBV2 869 aa19.15■□□□□ 0.66
CCT6P3-201ENST00000419314 NCOA1Q15788 1441 aa19.15■□□□□ 0.66
CCT6P3-201ENST00000419314 C9orf84Q5VXU9 1444 aa19.14■□□□□ 0.65
CCT6P3-201ENST00000419314 AKNAQ7Z591 1439 aa19.14■□□□□ 0.65
CCT6P3-201ENST00000419314 RSPH4AQ5TD94 716 aa19.14■□□□□ 0.65
CCT6P3-201ENST00000419314 OSCARQ8IYS5 282 aa19.14■□□□□ 0.65
CCT6P3-201ENST00000419314 FAM9BQ8IZU0 186 aa19.14■□□□□ 0.65
CCT6P3-201ENST00000419314 HNRNPUQ00839 825 aaKnown RBP eCLIP19.13■□□□□ 0.657e-9■□□□□ 8.4
CCT6P3-201ENST00000419314 AFAP1Q8N556 730 aa19.12■□□□□ 0.65
CCT6P3-201ENST00000419314 CHGAP10645 457 aaKnown RBP19.11■□□□□ 0.65
CCT6P3-201ENST00000419314 PELP1Q8IZL8 1130 aaKnown RBP19.1■□□□□ 0.65
CCT6P3-201ENST00000419314 ARHGAP5Q13017 1502 aa19.1■□□□□ 0.65
CCT6P3-201ENST00000419314 KIF14Q15058 1648 aa19.09■□□□□ 0.65
CCT6P3-201ENST00000419314 SPAG9O60271 1321 aaKnown RBP19.09■□□□□ 0.65
CCT6P3-201ENST00000419314 ANKRD30BQ9BXX2 1392 aa19.08■□□□□ 0.65
CCT6P3-201ENST00000419314 SENP3-EIF4A1A0A087X0R7 540 aa19.08■□□□□ 0.65
CCT6P3-201ENST00000419314 MRS2Q9HD23 443 aa19.07■□□□□ 0.64
CCT6P3-201ENST00000419314 KDM6BO15054 1643 aa19.05■□□□□ 0.64
CCT6P3-201ENST00000419314 WASHC2AQ641Q2 1341 aa19.05■□□□□ 0.64
CCT6P3-201ENST00000419314 SENP3Q9H4L4 574 aaPredicted RBP19.03■□□□□ 0.64
CCT6P3-201ENST00000419314 KIF3BO15066 747 aa19.03■□□□□ 0.64
CCT6P3-201ENST00000419314 KIAA1107Q9UPP5 1409 aa19.01■□□□□ 0.63
CCT6P3-201ENST00000419314 FKBP8Q14318 412 aa19■□□□□ 0.63
CCT6P3-201ENST00000419314 C11orf95C9JLR9 678 aaPredicted RBP18.99■□□□□ 0.63
CCT6P3-201ENST00000419314 CCER2I3L3R5 266 aa18.99■□□□□ 0.63
CCT6P3-201ENST00000419314 CYB5RLQ6IPT4 315 aa18.98■□□□□ 0.63
CCT6P3-201ENST00000419314 ABCA8O94911 1581 aa18.98■□□□□ 0.63
CCT6P3-201ENST00000419314 ERCC6L2Q5T890 1561 aa18.97■□□□□ 0.63
CCT6P3-201ENST00000419314 DNMT1P26358 1616 aaKnown RBP18.97■□□□□ 0.63
CCT6P3-201ENST00000419314 GGT6Q6P531 493 aa18.97■□□□□ 0.63
CCT6P3-201ENST00000419314 ST20-MTHFSA0A0A6YYL1 179 aa18.96■□□□□ 0.63
CCT6P3-201ENST00000419314 CHD1O14646 1710 aa18.96■□□□□ 0.63
CCT6P3-201ENST00000419314 CCDC141Q6ZP82 1450 aa18.95■□□□□ 0.62
CCT6P3-201ENST00000419314 CCDC144AA2RUR9 1427 aa18.94■□□□□ 0.62
CCT6P3-201ENST00000419314 USP47Q96K76 1375 aa18.94■□□□□ 0.62
CCT6P3-201ENST00000419314 ROCK2O75116 1388 aaKnown RBP18.93■□□□□ 0.62
CCT6P3-201ENST00000419314 ITSN2Q9NZM3 1697 aa18.93■□□□□ 0.62
CCT6P3-201ENST00000419314 KIF7Q2M1P5 1343 aa18.93■□□□□ 0.62
CCT6P3-201ENST00000419314 RPRD2Q5VT52 1461 aaKnown RBP18.92■□□□□ 0.62
CCT6P3-201ENST00000419314 ABCC10Q5T3U5 1492 aa18.91■□□□□ 0.62
CCT6P3-201ENST00000419314 TMC1Q8TDI8 760 aa18.91■□□□□ 0.62
CCT6P3-201ENST00000419314 CCDC7Q96M83 1385 aa18.9■□□□□ 0.62
CCT6P3-201ENST00000419314 IRX6P78412 446 aaPredicted RBP18.9■□□□□ 0.62
CCT6P3-201ENST00000419314 SALL2Q9Y467 1007 aaPredicted RBP18.9■□□□□ 0.62
CCT6P3-201ENST00000419314 PZPP20742 1482 aa18.89■□□□□ 0.61
CCT6P3-201ENST00000419314 SYCP2Q9BX26 1530 aa18.88■□□□□ 0.61
CCT6P3-201ENST00000419314 PLEKHH2Q8IVE3 1493 aa18.87■□□□□ 0.61
CCT6P3-201ENST00000419314 NBPF1Q3BBV0 1214 aa18.87■□□□□ 0.61
CCT6P3-201ENST00000419314 DENND4BO75064 1496 aaPredicted RBP18.87■□□□□ 0.61
CCT6P3-201ENST00000419314 ABCC2Q92887 1545 aa18.86■□□□□ 0.61
CCT6P3-201ENST00000419314 GCC2Q8IWJ2 1684 aa18.86■□□□□ 0.61
CCT6P3-201ENST00000419314 PRKRIP1Q9H875 184 aaPredicted RBP18.86■□□□□ 0.61
CCT6P3-201ENST00000419314 SUPT16HQ9Y5B9 1047 aaKnown RBP18.86■□□□□ 0.61
CCT6P3-201ENST00000419314 KANK1Q14678 1352 aa18.86■□□□□ 0.61
CCT6P3-201ENST00000419314 SCAPERQ9BY12 1400 aa18.86■□□□□ 0.61
CCT6P3-201ENST00000419314 CCDC184Q52MB2 194 aa18.84■□□□□ 0.61
CCT6P3-201ENST00000419314 PLCH2O75038 1416 aa18.82■□□□□ 0.6
CCT6P3-201ENST00000419314 TRAPPC8Q9Y2L5 1435 aa18.81■□□□□ 0.6
CCT6P3-201ENST00000419314 MBD5Q9P267 1494 aa18.81■□□□□ 0.6
CCT6P3-201ENST00000419314 ADGRL2O95490 1459 aa18.81■□□□□ 0.6
CCT6P3-201ENST00000419314 CC2D1BQ5T0F9 858 aaKnown RBP18.8■□□□□ 0.6
CCT6P3-201ENST00000419314 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.78■□□□□ 0.69e-17■□□□□ 9.2
CCT6P3-201ENST00000419314 RAPGEF3O95398 923 aa18.78■□□□□ 0.6
CCT6P3-201ENST00000419314 CNTLNQ9NXG0 1405 aa18.78■□□□□ 0.6
CCT6P3-201ENST00000419314 NUTM2DQ5VT03 806 aaPredicted RBP18.76■□□□□ 0.59
CCT6P3-201ENST00000419314 CDC42BPAQ5VT25 1732 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms