RNA–Protein interactions for RNA: ENST00000417382.5

HMG20B-204, Transcript of high mobility group 20B, humanhuman

TSL 4

Gene HMG20B, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-204ENST00000417382 PREX2Q70Z35 1606 aa33.5■■■□□ 2.95
HMG20B-204ENST00000417382 EHBP1L1Q8N3D4 1523 aa33.5■■■□□ 2.95
HMG20B-204ENST00000417382 CDC42BPBQ9Y5S2 1711 aa33.48■■■□□ 2.95
HMG20B-204ENST00000417382 POGZQ7Z3K3 1410 aa33.48■■■□□ 2.95
HMG20B-204ENST00000417382 ZMYM4Q5VZL5 1548 aa33.48■■■□□ 2.95
HMG20B-204ENST00000417382 AEBP2Q6ZN18 517 aaPredicted RBP33.47■■■□□ 2.95
HMG20B-204ENST00000417382 KDM4FA0A1W2PPD8 638 aa33.46■■■□□ 2.95
HMG20B-204ENST00000417382 MAGI2Q86UL8 1455 aa33.45■■■□□ 2.95
HMG20B-204ENST00000417382 GPATCH8Q9UKJ3 1502 aaKnown RBP33.45■■■□□ 2.95
HMG20B-204ENST00000417382 MAP3K1Q13233 1512 aa33.43■■■□□ 2.94
HMG20B-204ENST00000417382 TIAM1Q13009 1591 aa33.43■■■□□ 2.94
HMG20B-204ENST00000417382 CDC42BPAQ5VT25 1732 aa33.43■■■□□ 2.94
HMG20B-204ENST00000417382 CCNB3Q8WWL7 1395 aa33.4■■■□□ 2.94
HMG20B-204ENST00000417382 ZNF518AQ6AHZ1 1483 aa33.38■■■□□ 2.93
HMG20B-204ENST00000417382 ARHGEF40Q8TER5 1519 aa33.38■■■□□ 2.93
HMG20B-204ENST00000417382 ABCC1P33527 1531 aa33.36■■■□□ 2.93
HMG20B-204ENST00000417382 CFDP1Q9UEE9 299 aaPredicted RBP33.33■■■□□ 2.93
HMG20B-204ENST00000417382 LRRC9Q6ZRR7 1453 aa33.32■■■□□ 2.92
HMG20B-204ENST00000417382 KDM5CP41229 1560 aa33.32■■■□□ 2.92
HMG20B-204ENST00000417382 ZFYVE16Q7Z3T8 1539 aa33.32■■■□□ 2.92
HMG20B-204ENST00000417382 PLEKHH2Q8IVE3 1493 aa33.29■■■□□ 2.92
HMG20B-204ENST00000417382 KIAA1107Q9UPP5 1409 aa33.28■■■□□ 2.92
HMG20B-204ENST00000417382 ARHGEF12Q9NZN5 1544 aa33.28■■■□□ 2.92
HMG20B-204ENST00000417382 SUPT6HQ7KZ85 1726 aaKnown RBP33.28■■■□□ 2.92
HMG20B-204ENST00000417382 AFAP1Q8N556 730 aa33.28■■■□□ 2.92
HMG20B-204ENST00000417382 NCOA2Q15596 1464 aa33.28■■■□□ 2.92
HMG20B-204ENST00000417382 YEATS2Q9ULM3 1422 aa33.28■■■□□ 2.92
HMG20B-204ENST00000417382 SAMD9LQ8IVG5 1584 aa33.26■■■□□ 2.92
HMG20B-204ENST00000417382 ITSN2Q9NZM3 1697 aa33.25■■■□□ 2.91
HMG20B-204ENST00000417382 TRAPPC8Q9Y2L5 1435 aa33.25■■■□□ 2.91
HMG20B-204ENST00000417382 MLH3Q9UHC1 1453 aa33.25■■■□□ 2.91
HMG20B-204ENST00000417382 ZNF777Q9ULD5 760 aaPredicted RBP33.24■■■□□ 2.91
HMG20B-204ENST00000417382 APLP2Q06481 763 aa33.21■■■□□ 2.91
HMG20B-204ENST00000417382 ATP10AO60312 1499 aa33.2■■■□□ 2.91
HMG20B-204ENST00000417382 HECW2Q9P2P5 1572 aa33.2■■■□□ 2.91
HMG20B-204ENST00000417382 KANK4Q5T7N3 995 aaPredicted RBP33.19■■■□□ 2.9
HMG20B-204ENST00000417382 SYCP2Q9BX26 1530 aa33.18■■■□□ 2.9
HMG20B-204ENST00000417382 C9orf84Q5VXU9 1444 aa33.16■■■□□ 2.9
HMG20B-204ENST00000417382 ARID4BQ4LE39 1312 aaPredicted RBP33.15■■■□□ 2.9
HMG20B-204ENST00000417382 HNRNPMP52272 730 aaKnown RBP eCLIP33.13■■■□□ 2.89
HMG20B-204ENST00000417382 BCORL1Q5H9F3 1711 aa33.11■■■□□ 2.89
HMG20B-204ENST00000417382 ADAMTSL3P82987 1691 aa33.11■■■□□ 2.89
HMG20B-204ENST00000417382 REREQ9P2R6 1566 aa33.1■■■□□ 2.89
HMG20B-204ENST00000417382 MBD5Q9P267 1494 aa33.09■■■□□ 2.89
HMG20B-204ENST00000417382 DIP2CQ9Y2E4 1556 aa33.09■■■□□ 2.89
HMG20B-204ENST00000417382 ZNF644Q9H582 1327 aaPredicted RBP33.08■■■□□ 2.89
HMG20B-204ENST00000417382 MYT1LQ9UL68 1186 aa33.08■■■□□ 2.89
HMG20B-204ENST00000417382 SPAG9O60271 1321 aaKnown RBP33.06■■■□□ 2.88
HMG20B-204ENST00000417382 RSPH4AQ5TD94 716 aa33.05■■■□□ 2.88
HMG20B-204ENST00000417382 KIDINS220Q9ULH0 1771 aa33.05■■■□□ 2.88
HMG20B-204ENST00000417382 SIGLEC1Q9BZZ2 1709 aa33.04■■■□□ 2.88
HMG20B-204ENST00000417382 MIA2Q96PC5 1412 aa33.03■■■□□ 2.88
HMG20B-204ENST00000417382 ABCA6Q8N139 1617 aa33.03■■■□□ 2.88
HMG20B-204ENST00000417382 CAMSAP2Q08AD1 1489 aa33.03■■■□□ 2.88
HMG20B-204ENST00000417382 MYOM3Q5VTT5 1437 aa33.02■■■□□ 2.88
HMG20B-204ENST00000417382 INO80Q9ULG1 1556 aaPredicted RBP32.99■■■□□ 2.87
HMG20B-204ENST00000417382 AGLP35573 1532 aa32.98■■■□□ 2.87
HMG20B-204ENST00000417382 ATP7AQ04656 1500 aa32.98■■■□□ 2.87
HMG20B-204ENST00000417382 RTEL1-TNFRSF6BF6WH68 1400 aa32.97■■■□□ 2.87
HMG20B-204ENST00000417382 PTPRMP28827 1452 aa32.96■■■□□ 2.87
HMG20B-204ENST00000417382 CCDC141Q6ZP82 1450 aa32.96■■■□□ 2.87
HMG20B-204ENST00000417382 MADDQ8WXG6 1647 aa32.95■■■□□ 2.87
HMG20B-204ENST00000417382 ARHGEF5Q12774 1597 aa32.94■■■□□ 2.86
HMG20B-204ENST00000417382 MLECQ14165 292 aa32.88■■■□□ 2.85
HMG20B-204ENST00000417382 A2MP01023 1474 aa32.86■■■□□ 2.85
HMG20B-204ENST00000417382 PLXNC1O60486 1568 aa32.84■■■□□ 2.85
HMG20B-204ENST00000417382 TSPY4P0CV99 314 aa32.83■■■□□ 2.85
HMG20B-204ENST00000417382 TSPY10P0CW01 314 aa32.83■■■□□ 2.85
HMG20B-204ENST00000417382 RIMS1Q86UR5 1692 aaKnown RBP32.82■■■□□ 2.84
HMG20B-204ENST00000417382 ADGBQ8N7X0 1667 aa32.81■■■□□ 2.84
HMG20B-204ENST00000417382 FER1L4A9Z1Z3 1794 aa32.81■■■□□ 2.84
HMG20B-204ENST00000417382 FGD6Q6ZV73 1430 aa32.8■■■□□ 2.84
HMG20B-204ENST00000417382 TCOF1Q13428 1488 aaKnown RBP32.78■■■□□ 2.84
HMG20B-204ENST00000417382 PTPN23Q9H3S7 1636 aa32.77■■■□□ 2.84
HMG20B-204ENST00000417382 MAST1Q9Y2H9 1570 aa32.76■■■□□ 2.84
HMG20B-204ENST00000417382 DHX29Q7Z478 1369 aaKnown RBP32.76■■■□□ 2.83
HMG20B-204ENST00000417382 CNTLNQ9NXG0 1405 aa32.71■■■□□ 2.83
HMG20B-204ENST00000417382 PPP6R1Q9UPN7 881 aa32.7■■■□□ 2.83
HMG20B-204ENST00000417382 SHANK2Q9UPX8 1470 aa32.68■■■□□ 2.82
HMG20B-204ENST00000417382 ESF1Q9H501 851 aaKnown RBP32.68■■■□□ 2.82
HMG20B-204ENST00000417382 ABCC5O15440 1437 aa32.67■■■□□ 2.82
HMG20B-204ENST00000417382 DAPK1P53355 1430 aa32.62■■■□□ 2.81
HMG20B-204ENST00000417382 DNMT1P26358 1616 aaKnown RBP32.62■■■□□ 2.81
HMG20B-204ENST00000417382 CROCC2H7BZ55 1655 aa32.59■■■□□ 2.81
HMG20B-204ENST00000417382 GGT6Q6P531 493 aa32.58■■■□□ 2.81
HMG20B-204ENST00000417382 MROH2AA6NES4 1674 aa32.56■■■□□ 2.8
HMG20B-204ENST00000417382 FAM135AQ9P2D6 1515 aa32.56■■■□□ 2.8
HMG20B-204ENST00000417382 KIF3BO15066 747 aa32.55■■■□□ 2.8
HMG20B-204ENST00000417382 CEBPAP49715 358 aaPredicted RBP32.55■■■□□ 2.8
HMG20B-204ENST00000417382 LMTK3Q96Q04 1460 aa32.54■■■□□ 2.8
HMG20B-204ENST00000417382 DUOX2Q9NRD8 1548 aa32.53■■■□□ 2.8
HMG20B-204ENST00000417382 PLPPR3Q6T4P5 718 aa32.53■■■□□ 2.8
HMG20B-204ENST00000417382 ZMYM3Q14202 1370 aa32.52■■■□□ 2.8
HMG20B-204ENST00000417382 C3P01024 1663 aa32.52■■■□□ 2.8
HMG20B-204ENST00000417382 SETD1BQ9UPS6 1966 aaKnown RBP32.5■■■□□ 2.79
HMG20B-204ENST00000417382 KIF15Q9NS87 1388 aa32.5■■■□□ 2.79
HMG20B-204ENST00000417382 FAM50AQ14320 339 aaKnown RBP32.5■■■□□ 2.79
HMG20B-204ENST00000417382 EIF2AK4Q9P2K8 1649 aaKnown RBP32.49■■■□□ 2.79
HMG20B-204ENST00000417382 ANKRD30AQ9BXX3 1397 aa32.47■■■□□ 2.79
HMG20B-204ENST00000417382 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP32.47■■■□□ 2.793e-6■□□□□ 10.4
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms