RNA–Protein interactions for RNA: ENST00000417033.1

MDC1-203, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 916 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-203ENST00000417033 PHLDB1Q86UU1 1377 aa12.55□□□□□ -0.4
MDC1-203ENST00000417033 SUPT6HQ7KZ85 1726 aaKnown RBP12.54□□□□□ -0.4
MDC1-203ENST00000417033 FAM69CQ0P6D2 419 aa12.52□□□□□ -0.41
MDC1-203ENST00000417033 ABCA9Q8IUA7 1624 aa12.51□□□□□ -0.41
MDC1-203ENST00000417033 KIF13AQ9H1H9 1805 aa12.51□□□□□ -0.41
MDC1-203ENST00000417033 GPATCH8Q9UKJ3 1502 aaKnown RBP12.5□□□□□ -0.41
MDC1-203ENST00000417033 GLI2P10070 1586 aa12.5□□□□□ -0.41
MDC1-203ENST00000417033 CCNB3Q8WWL7 1395 aa12.49□□□□□ -0.41
MDC1-203ENST00000417033 CDC42BPAQ5VT25 1732 aa12.48□□□□□ -0.41
MDC1-203ENST00000417033 MYOM3Q5VTT5 1437 aa12.48□□□□□ -0.41
MDC1-203ENST00000417033 MAP3K4Q9Y6R4 1608 aa12.48□□□□□ -0.41
MDC1-203ENST00000417033 CD109Q6YHK3 1445 aa12.47□□□□□ -0.41
MDC1-203ENST00000417033 PREX2Q70Z35 1606 aa12.47□□□□□ -0.41
MDC1-203ENST00000417033 TRHP20396 242 aaPredicted RBP12.46□□□□□ -0.41
MDC1-203ENST00000417033 PLCH2O75038 1416 aa12.45□□□□□ -0.42
MDC1-203ENST00000417033 MYO5CQ9NQX4 1742 aa12.45□□□□□ -0.42
MDC1-203ENST00000417033 CDC42BPBQ9Y5S2 1711 aa12.45□□□□□ -0.42
MDC1-203ENST00000417033 PPRC1Q5VV67 1664 aaKnown RBP12.45□□□□□ -0.42
MDC1-203ENST00000417033 ZNF644Q9H582 1327 aaPredicted RBP12.45□□□□□ -0.42
MDC1-203ENST00000417033 ARHGAP5Q13017 1502 aa12.45□□□□□ -0.42
MDC1-203ENST00000417033 FGD6Q6ZV73 1430 aa12.45□□□□□ -0.42
MDC1-203ENST00000417033 TSPOAP1O95153 1857 aa12.44□□□□□ -0.42
MDC1-203ENST00000417033 ITSN2Q9NZM3 1697 aa12.43□□□□□ -0.42
MDC1-203ENST00000417033 CFDP1Q9UEE9 299 aaPredicted RBP12.43□□□□□ -0.42
MDC1-203ENST00000417033 ZNF777Q9ULD5 760 aaPredicted RBP12.43□□□□□ -0.42
MDC1-203ENST00000417033 SAMD9LQ8IVG5 1584 aa12.43□□□□□ -0.42
MDC1-203ENST00000417033 FANCAO15360 1455 aa12.41□□□□□ -0.42
MDC1-203ENST00000417033 CAMSAP2Q08AD1 1489 aa12.41□□□□□ -0.42
MDC1-203ENST00000417033 RRBP1Q9P2E9 1410 aaKnown RBP12.41□□□□□ -0.42
MDC1-203ENST00000417033 ARAP3Q8WWN8 1544 aa12.41□□□□□ -0.42
MDC1-203ENST00000417033 PTPN23Q9H3S7 1636 aa12.4□□□□□ -0.42
MDC1-203ENST00000417033 MIA2Q96PC5 1412 aa12.4□□□□□ -0.42
MDC1-203ENST00000417033 DCAF8L1A6NGE4 600 aa12.4□□□□□ -0.42
MDC1-203ENST00000417033 ARHGEF12Q9NZN5 1544 aa12.4□□□□□ -0.42
MDC1-203ENST00000417033 TCOF1Q13428 1488 aaKnown RBP12.4□□□□□ -0.43
MDC1-203ENST00000417033 ABCC1P33527 1531 aa12.38□□□□□ -0.43
MDC1-203ENST00000417033 SYCP2Q9BX26 1530 aa12.38□□□□□ -0.43
MDC1-203ENST00000417033 FAM50AQ14320 339 aaKnown RBP12.38□□□□□ -0.43
MDC1-203ENST00000417033 EFCAB2Q5VUJ9 269 aa12.38□□□□□ -0.43
MDC1-203ENST00000417033 AKNAQ7Z591 1439 aa12.37□□□□□ -0.43
MDC1-203ENST00000417033 POTEDQ86YR6 584 aa12.37□□□□□ -0.43
MDC1-203ENST00000417033 ADGRL1O94910 1474 aa12.36□□□□□ -0.43
MDC1-203ENST00000417033 NEO1Q92859 1461 aa12.36□□□□□ -0.43
MDC1-203ENST00000417033 HNRNPMP52272 730 aaKnown RBP eCLIP12.36□□□□□ -0.43
MDC1-203ENST00000417033 TRAPPC8Q9Y2L5 1435 aa12.36□□□□□ -0.43
MDC1-203ENST00000417033 TEX14Q8IWB6 1497 aa12.35□□□□□ -0.43
MDC1-203ENST00000417033 MBD5Q9P267 1494 aa12.35□□□□□ -0.43
MDC1-203ENST00000417033 COL17A1Q9UMD9 1497 aaPredicted RBP12.35□□□□□ -0.43
MDC1-203ENST00000417033 SCAPERQ9BY12 1400 aa12.35□□□□□ -0.43
MDC1-203ENST00000417033 FOXD4L1Q9NU39 408 aa12.34□□□□□ -0.43
MDC1-203ENST00000417033 PTPRKQ15262 1439 aa12.34□□□□□ -0.43
MDC1-203ENST00000417033 CFAP74Q9C0B2 1584 aa12.34□□□□□ -0.43
MDC1-203ENST00000417033 ITGAEP38570 1179 aa12.33□□□□□ -0.44
MDC1-203ENST00000417033 ABCC5O15440 1437 aa12.33□□□□□ -0.44
MDC1-203ENST00000417033 FRMPD1Q5SYB0 1578 aa12.32□□□□□ -0.44
MDC1-203ENST00000417033 KIAA1107Q9UPP5 1409 aa12.32□□□□□ -0.44
MDC1-203ENST00000417033 PLEKHH2Q8IVE3 1493 aa12.32□□□□□ -0.44
MDC1-203ENST00000417033 DAPK1P53355 1430 aa12.31□□□□□ -0.44
MDC1-203ENST00000417033 POGZQ7Z3K3 1410 aa12.31□□□□□ -0.44
MDC1-203ENST00000417033 DNMT1P26358 1616 aaKnown RBP12.31□□□□□ -0.44
MDC1-203ENST00000417033 RAPGEF3O95398 923 aa12.31□□□□□ -0.44
MDC1-203ENST00000417033 AFAP1Q8N556 730 aa12.31□□□□□ -0.44
MDC1-203ENST00000417033 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.3□□□□□ -0.44
MDC1-203ENST00000417033 ARHGEF5Q12774 1597 aa12.3□□□□□ -0.44
MDC1-203ENST00000417033 DENND4BO75064 1496 aaPredicted RBP12.3□□□□□ -0.44
MDC1-203ENST00000417033 CCDC141Q6ZP82 1450 aa12.3□□□□□ -0.44
MDC1-203ENST00000417033 ZBTB22O15209 634 aa12.28□□□□□ -0.44
MDC1-203ENST00000417033 TRIM26Q12899 539 aaPredicted RBP12.28□□□□□ -0.44
MDC1-203ENST00000417033 CHIC2Q9UKJ5 165 aa12.28□□□□□ -0.44
MDC1-203ENST00000417033 CROCC2H7BZ55 1655 aa12.28□□□□□ -0.44
MDC1-203ENST00000417033 RICTORQ6R327 1708 aa12.28□□□□□ -0.44
MDC1-203ENST00000417033 C9orf84Q5VXU9 1444 aa12.27□□□□□ -0.45
MDC1-203ENST00000417033 KDM5CP41229 1560 aa12.26□□□□□ -0.45
MDC1-203ENST00000417033 SLC4A2P04920 1241 aa12.26□□□□□ -0.45
MDC1-203ENST00000417033 ZNF518AQ6AHZ1 1483 aa12.26□□□□□ -0.45
MDC1-203ENST00000417033 KDM6BO15054 1643 aa12.26□□□□□ -0.45
MDC1-203ENST00000417033 SHANK2Q9UPX8 1470 aa12.25□□□□□ -0.45
MDC1-203ENST00000417033 ZFYVE16Q7Z3T8 1539 aa12.25□□□□□ -0.45
MDC1-203ENST00000417033 INO80Q9ULG1 1556 aaPredicted RBP12.24□□□□□ -0.45
MDC1-203ENST00000417033 YEATS2Q9ULM3 1422 aa12.24□□□□□ -0.45
MDC1-203ENST00000417033 MAST1Q9Y2H9 1570 aa12.23□□□□□ -0.45
MDC1-203ENST00000417033 ATP7AQ04656 1500 aa12.23□□□□□ -0.45
MDC1-203ENST00000417033 ZMYM4Q5VZL5 1548 aa12.23□□□□□ -0.45
MDC1-203ENST00000417033 SPAG9O60271 1321 aaKnown RBP12.23□□□□□ -0.45
MDC1-203ENST00000417033 PCGF6Q9BYE7 350 aa12.23□□□□□ -0.45
MDC1-203ENST00000417033 RRP7BPQ9NSQ0 103 aa12.23□□□□□ -0.45
MDC1-203ENST00000417033 HECW2Q9P2P5 1572 aa12.22□□□□□ -0.45
MDC1-203ENST00000417033 KIDINS220Q9ULH0 1771 aa12.22□□□□□ -0.45
MDC1-203ENST00000417033 ADGRL2O95490 1459 aa12.21□□□□□ -0.45
MDC1-203ENST00000417033 RSPH4AQ5TD94 716 aa12.21□□□□□ -0.45
MDC1-203ENST00000417033 ABCA6Q8N139 1617 aa12.21□□□□□ -0.46
MDC1-203ENST00000417033 MLH3Q9UHC1 1453 aa12.21□□□□□ -0.46
MDC1-203ENST00000417033 TSPY4P0CV99 314 aa12.2□□□□□ -0.46
MDC1-203ENST00000417033 TSPY10P0CW01 314 aa12.2□□□□□ -0.46
MDC1-203ENST00000417033 MYT1LQ9UL68 1186 aa12.2□□□□□ -0.46
MDC1-203ENST00000417033 DIP2CQ9Y2E4 1556 aa12.2□□□□□ -0.46
MDC1-203ENST00000417033 NCOA1Q15788 1441 aa12.2□□□□□ -0.46
MDC1-203ENST00000417033 ADGBQ8N7X0 1667 aa12.19□□□□□ -0.46
MDC1-203ENST00000417033 RTEL1-TNFRSF6BF6WH68 1400 aa12.19□□□□□ -0.46
MDC1-203ENST00000417033 ROCK1Q13464 1354 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms