RNA–Protein interactions for RNA: ENST00000415997.1

APP-207, Transcript of amyloid beta precursor protein, humanhuman

TSL 3

Gene APP, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-207ENST00000415997 ERBB3P21860 1342 aa7.33□□□□□ -1.24
APP-207ENST00000415997 SOX12O15370 315 aa7.33□□□□□ -1.24
APP-207ENST00000415997 MICALL2Q8IY33 904 aa7.33□□□□□ -1.24
APP-207ENST00000415997 KRTAP3-3Q9BYR6 98 aa7.31□□□□□ -1.24
APP-207ENST00000415997 KRTAP3-2Q9BYR7 98 aa7.31□□□□□ -1.24
APP-207ENST00000415997 RIMBP2O15034 1052 aa7.3□□□□□ -1.24
APP-207ENST00000415997 HOXB1P14653 301 aaPredicted RBP7.3□□□□□ -1.24
APP-207ENST00000415997 TMEM92Q6UXU6 159 aa7.3□□□□□ -1.24
APP-207ENST00000415997 MS4A4AQ96JQ5 239 aa7.3□□□□□ -1.24
APP-207ENST00000415997 STK24Q9Y6E0 443 aa7.3□□□□□ -1.24
APP-207ENST00000415997 CUX2O14529 1486 aa7.3□□□□□ -1.24
APP-207ENST00000415997 BCL11BQ9C0K0 894 aaPredicted RBP7.29□□□□□ -1.24
APP-207ENST00000415997 VARS2Q5ST30 1063 aaKnown RBP7.27□□□□□ -1.25
APP-207ENST00000415997 STK25O00506 426 aa7.26□□□□□ -1.25
APP-207ENST00000415997 ECM2O94769 699 aaPredicted RBP7.26□□□□□ -1.25
APP-207ENST00000415997 NLRP6P59044 892 aa7.26□□□□□ -1.25
APP-207ENST00000415997 TAOK2Q9UL54 1235 aa7.26□□□□□ -1.25
APP-207ENST00000415997 SHROOM4Q9ULL8 1493 aa7.25□□□□□ -1.25
APP-207ENST00000415997 ARSIQ5FYB1 569 aa7.23□□□□□ -1.25
APP-207ENST00000415997 EIF4G1Q04637 1599 aaKnown RBP7.21□□□□□ -1.25
APP-207ENST00000415997 KHSRPQ92945 711 aaKnown RBP eCLIP7.21□□□□□ -1.26
APP-207ENST00000415997 GPR153Q6NV75 609 aa7.2□□□□□ -1.26
APP-207ENST00000415997 FBXO22Q8NEZ5 403 aa7.2□□□□□ -1.26
APP-207ENST00000415997 MFRPQ9BY79 579 aa7.2□□□□□ -1.26
APP-207ENST00000415997 ZSWIM6Q9HCJ5 1215 aa7.2□□□□□ -1.26
APP-207ENST00000415997 RGL2O15211 777 aa7.18□□□□□ -1.26
APP-207ENST00000415997 ANKRD13DQ6ZTN6 518 aa7.17□□□□□ -1.26
APP-207ENST00000415997 ZNF687Q8N1G0 1237 aa7.17□□□□□ -1.26
APP-207ENST00000415997 C2orf72A6NCS6 295 aa7.16□□□□□ -1.26
APP-207ENST00000415997 PKD2Q13563 968 aa7.15□□□□□ -1.26
APP-207ENST00000415997 RNF166Q96A37 237 aaPredicted RBP7.15□□□□□ -1.26
APP-207ENST00000415997 MYT1LQ9UL68 1186 aa7.15□□□□□ -1.26
APP-207ENST00000415997 MYO15BQ96JP2 1530 aa7.15□□□□□ -1.27
APP-207ENST00000415997 ZNF316A6NFI3 1004 aaPredicted RBP7.13□□□□□ -1.27
APP-207ENST00000415997 NUDT7P0C024 238 aa7.13□□□□□ -1.27
APP-207ENST00000415997 TMC2Q8TDI7 906 aa7.13□□□□□ -1.27
APP-207ENST00000415997 PPP1R37O75864 691 aa7.1□□□□□ -1.27
APP-207ENST00000415997 KIF3CO14782 793 aa7.09□□□□□ -1.27
APP-207ENST00000415997 LHX6Q9UPM6 363 aa7.09□□□□□ -1.27
APP-207ENST00000415997 AXIN2Q9Y2T1 843 aa7.09□□□□□ -1.27
APP-207ENST00000415997 PCDHGA4Q9Y5G9 962 aa7.09□□□□□ -1.27
APP-207ENST00000415997 LSM11P83369 360 aaKnown RBP eCLIP7.06□□□□□ -1.28
APP-207ENST00000415997 CHGAP10645 457 aaKnown RBP7.03□□□□□ -1.28
APP-207ENST00000415997 PTGER2P43116 358 aa7.03□□□□□ -1.28
APP-207ENST00000415997 ERCC6Q03468 1493 aa7.03□□□□□ -1.28
APP-207ENST00000415997 SLC34A2O95436 690 aa7.02□□□□□ -1.29
APP-207ENST00000415997 PLPP6Q8IY26 295 aa7.01□□□□□ -1.29
APP-207ENST00000415997 DCAF8L2P0C7V8 631 aa7□□□□□ -1.29
APP-207ENST00000415997 PBX2P40425 430 aa7□□□□□ -1.29
APP-207ENST00000415997 POTEEQ6S8J3 1075 aa7□□□□□ -1.29
APP-207ENST00000415997 HS6ST3Q8IZP7 471 aa6.98□□□□□ -1.29
APP-207ENST00000415997 ARHGAP33O14559 1287 aa6.97□□□□□ -1.29
APP-207ENST00000415997 PSEN2P49810 448 aa6.97□□□□□ -1.29
APP-207ENST00000415997 DSG2Q14126 1118 aa6.97□□□□□ -1.29
APP-207ENST00000415997 TBC1D12O60347 775 aa6.96□□□□□ -1.3
APP-207ENST00000415997 FOXK1P85037 733 aa6.96□□□□□ -1.3
APP-207ENST00000415997 PTCD2Q8WV60 388 aaKnown RBP6.96□□□□□ -1.3
APP-207ENST00000415997 GPHNQ9NQX3 736 aaPredicted RBP6.96□□□□□ -1.3
APP-207ENST00000415997 PSDA5PKW4 1024 aaPredicted RBP6.95□□□□□ -1.3
APP-207ENST00000415997 ADGRD1Q6QNK2 874 aa6.95□□□□□ -1.3
APP-207ENST00000415997 UPF1Q92900 1129 aaKnown RBP eCLIP6.95□□□□□ -1.3
APP-207ENST00000415997 STAC3Q96MF2 364 aa6.95□□□□□ -1.3
APP-207ENST00000415997 DMRTA1Q5VZB9 504 aa6.94□□□□□ -1.3
APP-207ENST00000415997 THOC2Q8NI27 1593 aaKnown RBP6.94□□□□□ -1.3
APP-207ENST00000415997 PPP4R3BQ5MIZ7 849 aa6.93□□□□□ -1.3
APP-207ENST00000415997 KCNK17Q96T54 332 aa6.92□□□□□ -1.3
APP-207ENST00000415997 HCSTQ9UBK5 93 aa6.92□□□□□ -1.3
APP-207ENST00000415997 KDM4FA0A1W2PPD8 638 aa6.91□□□□□ -1.3
APP-207ENST00000415997 NKX1-1Q15270 411 aaPredicted RBP6.91□□□□□ -1.3
APP-207ENST00000415997 PLA2G2EQ9NZK7 142 aa6.91□□□□□ -1.3
APP-207ENST00000415997 KCTD12Q96CX2 325 aaKnown RBP6.9□□□□□ -1.3
APP-207ENST00000415997 KCNH8Q96L42 1107 aa6.9□□□□□ -1.3
APP-207ENST00000415997 ZNF454Q8N9F8 522 aa6.89□□□□□ -1.31
APP-207ENST00000415997 SCRIBQ14160 1630 aa6.89□□□□□ -1.31
APP-207ENST00000415997 TK2O00142 265 aa6.87□□□□□ -1.31
APP-207ENST00000415997 PTPN5P54829 565 aa6.86□□□□□ -1.31
APP-207ENST00000415997 PPP1R15BQ5SWA1 713 aa6.86□□□□□ -1.31
APP-207ENST00000415997 RYDENQ9NUL5 291 aaKnown RBP6.86□□□□□ -1.31
APP-207ENST00000415997 NESP48681 1621 aa6.86□□□□□ -1.31
APP-207ENST00000415997 HRO43593 1189 aa6.85□□□□□ -1.31
APP-207ENST00000415997 OXER1Q8TDS5 423 aa6.85□□□□□ -1.31
APP-207ENST00000415997 PDE4AP27815 886 aa6.84□□□□□ -1.31
APP-207ENST00000415997 LARP6Q9BRS8 491 aaKnown RBP6.84□□□□□ -1.31
APP-207ENST00000415997 CRISPLD2Q9H0B8 497 aa6.84□□□□□ -1.31
APP-207ENST00000415997 NCAPD3P42695 1498 aa6.84□□□□□ -1.31
APP-207ENST00000415997 VPS9D1Q9Y2B5 631 aa6.83□□□□□ -1.32
APP-207ENST00000415997 NCKAP5LQ9HCH0 1330 aa6.82□□□□□ -1.32
APP-207ENST00000415997 DCAF1Q9Y4B6 1507 aa6.82□□□□□ -1.32
APP-207ENST00000415997 GOLGA8CPA6NN73 597 aa6.82□□□□□ -1.32
APP-207ENST00000415997 RIMBP3CA6NJZ7 1639 aa6.81□□□□□ -1.32
APP-207ENST00000415997 RIMBP3BA6NNM3 1639 aa6.81□□□□□ -1.32
APP-207ENST00000415997 RIMBP3Q9UFD9 1639 aa6.81□□□□□ -1.32
APP-207ENST00000415997 EVI5O60447 810 aa6.81□□□□□ -1.32
APP-207ENST00000415997 MAP3K9P80192 1104 aa6.81□□□□□ -1.32
APP-207ENST00000415997 BAZ1AQ9NRL2 1556 aaPredicted RBP6.81□□□□□ -1.32
APP-207ENST00000415997 GTPBP6O43824 516 aaPredicted RBP6.8□□□□□ -1.32
APP-207ENST00000415997 PTPREP23469 700 aa6.8□□□□□ -1.32
APP-207ENST00000415997 FOSBP53539 338 aa6.79□□□□□ -1.32
APP-207ENST00000415997 DDX27Q96GQ7 796 aaKnown RBP6.79□□□□□ -1.32
APP-207ENST00000415997 BCL2L12Q9HB09 334 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms