RNA–Protein interactions for RNA: ENST00000415944.3

MECP2-204, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 5

Gene MECP2, Length 413 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-204ENST00000415944 PREX2Q70Z35 1606 aa12.84□□□□□ -0.35
MECP2-204ENST00000415944 CCNB3Q8WWL7 1395 aa12.83□□□□□ -0.36
MECP2-204ENST00000415944 CDC42BPBQ9Y5S2 1711 aa12.82□□□□□ -0.36
MECP2-204ENST00000415944 TEX14Q8IWB6 1497 aa12.82□□□□□ -0.36
MECP2-204ENST00000415944 CFAP74Q9C0B2 1584 aa12.81□□□□□ -0.36
MECP2-204ENST00000415944 ITSN2Q9NZM3 1697 aa12.81□□□□□ -0.36
MECP2-204ENST00000415944 NCOA2Q15596 1464 aa12.81□□□□□ -0.36
MECP2-204ENST00000415944 KANK4Q5T7N3 995 aaPredicted RBP12.81□□□□□ -0.36
MECP2-204ENST00000415944 PLCH2O75038 1416 aa12.8□□□□□ -0.36
MECP2-204ENST00000415944 NEO1Q92859 1461 aa12.78□□□□□ -0.36
MECP2-204ENST00000415944 GPATCH8Q9UKJ3 1502 aaKnown RBP12.78□□□□□ -0.36
MECP2-204ENST00000415944 FANCAO15360 1455 aa12.76□□□□□ -0.37
MECP2-204ENST00000415944 ARHGAP5Q13017 1502 aa12.76□□□□□ -0.37
MECP2-204ENST00000415944 PHLDB1Q86UU1 1377 aa12.75□□□□□ -0.37
MECP2-204ENST00000415944 SAMD9LQ8IVG5 1584 aa12.73□□□□□ -0.37
MECP2-204ENST00000415944 MYOM3Q5VTT5 1437 aa12.73□□□□□ -0.37
MECP2-204ENST00000415944 AKNAQ7Z591 1439 aa12.73□□□□□ -0.37
MECP2-204ENST00000415944 KDM6BO15054 1643 aa12.73□□□□□ -0.37
MECP2-204ENST00000415944 ABCC1P33527 1531 aa12.72□□□□□ -0.37
MECP2-204ENST00000415944 TIMELESSQ9UNS1 1208 aa12.72□□□□□ -0.37
MECP2-204ENST00000415944 RICTORQ6R327 1708 aa12.71□□□□□ -0.37
MECP2-204ENST00000415944 EFCAB2Q5VUJ9 269 aa12.71□□□□□ -0.37
MECP2-204ENST00000415944 MIA2Q96PC5 1412 aa12.71□□□□□ -0.38
MECP2-204ENST00000415944 FRMPD1Q5SYB0 1578 aa12.7□□□□□ -0.38
MECP2-204ENST00000415944 ADGRL1O94910 1474 aa12.7□□□□□ -0.38
MECP2-204ENST00000415944 COL17A1Q9UMD9 1497 aaPredicted RBP12.7□□□□□ -0.38
MECP2-204ENST00000415944 CFDP1Q9UEE9 299 aaPredicted RBP12.69□□□□□ -0.38
MECP2-204ENST00000415944 PLEKHH2Q8IVE3 1493 aa12.69□□□□□ -0.38
MECP2-204ENST00000415944 CAMSAP2Q08AD1 1489 aa12.68□□□□□ -0.38
MECP2-204ENST00000415944 PTPN23Q9H3S7 1636 aa12.68□□□□□ -0.38
MECP2-204ENST00000415944 FGD6Q6ZV73 1430 aa12.68□□□□□ -0.38
MECP2-204ENST00000415944 KIAA1107Q9UPP5 1409 aa12.68□□□□□ -0.38
MECP2-204ENST00000415944 SYCP2Q9BX26 1530 aa12.67□□□□□ -0.38
MECP2-204ENST00000415944 ARHGEF12Q9NZN5 1544 aa12.67□□□□□ -0.38
MECP2-204ENST00000415944 DENND4BO75064 1496 aaPredicted RBP12.67□□□□□ -0.38
MECP2-204ENST00000415944 TCOF1Q13428 1488 aaKnown RBP12.67□□□□□ -0.38
MECP2-204ENST00000415944 POGZQ7Z3K3 1410 aa12.67□□□□□ -0.38
MECP2-204ENST00000415944 KDM5CP41229 1560 aa12.66□□□□□ -0.38
MECP2-204ENST00000415944 SCAPERQ9BY12 1400 aa12.66□□□□□ -0.38
MECP2-204ENST00000415944 ZMYM4Q5VZL5 1548 aa12.66□□□□□ -0.38
MECP2-204ENST00000415944 ARHGEF5Q12774 1597 aa12.65□□□□□ -0.38
MECP2-204ENST00000415944 SETD5Q9C0A6 1442 aa12.65□□□□□ -0.38
MECP2-204ENST00000415944 ZNF316A6NFI3 1004 aaPredicted RBP12.65□□□□□ -0.38
MECP2-204ENST00000415944 DHX57Q6P158 1386 aaKnown RBP12.65□□□□□ -0.38
MECP2-204ENST00000415944 ZNF518AQ6AHZ1 1483 aa12.65□□□□□ -0.38
MECP2-204ENST00000415944 MBD5Q9P267 1494 aa12.65□□□□□ -0.38
MECP2-204ENST00000415944 ZNF644Q9H582 1327 aaPredicted RBP12.62□□□□□ -0.39
MECP2-204ENST00000415944 TRAPPC8Q9Y2L5 1435 aa12.62□□□□□ -0.39
MECP2-204ENST00000415944 ZNF777Q9ULD5 760 aaPredicted RBP12.62□□□□□ -0.39
MECP2-204ENST00000415944 CROCC2H7BZ55 1655 aa12.61□□□□□ -0.39
MECP2-204ENST00000415944 HECW2Q9P2P5 1572 aa12.61□□□□□ -0.39
MECP2-204ENST00000415944 CCDC141Q6ZP82 1450 aa12.61□□□□□ -0.39
MECP2-204ENST00000415944 DNMT1P26358 1616 aaKnown RBP12.61□□□□□ -0.39
MECP2-204ENST00000415944 INO80Q9ULG1 1556 aaPredicted RBP12.6□□□□□ -0.39
MECP2-204ENST00000415944 RAPGEF3O95398 923 aa12.6□□□□□ -0.39
MECP2-204ENST00000415944 ARHGEF40Q8TER5 1519 aa12.6□□□□□ -0.39
MECP2-204ENST00000415944 MAGI2Q86UL8 1455 aa12.59□□□□□ -0.39
MECP2-204ENST00000415944 KIDINS220Q9ULH0 1771 aa12.59□□□□□ -0.39
MECP2-204ENST00000415944 MAST1Q9Y2H9 1570 aa12.59□□□□□ -0.39
MECP2-204ENST00000415944 MLH3Q9UHC1 1453 aa12.59□□□□□ -0.39
MECP2-204ENST00000415944 ZFYVE16Q7Z3T8 1539 aa12.58□□□□□ -0.4
MECP2-204ENST00000415944 HNRNPMP52272 730 aaKnown RBP eCLIP12.58□□□□□ -0.43e-7■■■■□ 24.6
MECP2-204ENST00000415944 DIEXFQ68CQ4 756 aaKnown RBP12.58□□□□□ -0.4
MECP2-204ENST00000415944 SHANK2Q9UPX8 1470 aa12.58□□□□□ -0.4
MECP2-204ENST00000415944 RSPH4AQ5TD94 716 aa12.57□□□□□ -0.4
MECP2-204ENST00000415944 ATP7AQ04656 1500 aa12.57□□□□□ -0.4
MECP2-204ENST00000415944 DAPK1P53355 1430 aa12.56□□□□□ -0.4
MECP2-204ENST00000415944 ABCA6Q8N139 1617 aa12.56□□□□□ -0.4
MECP2-204ENST00000415944 AFAP1Q8N556 730 aa12.56□□□□□ -0.4
MECP2-204ENST00000415944 DIP2CQ9Y2E4 1556 aa12.56□□□□□ -0.4
MECP2-204ENST00000415944 RAB3GAP2Q9H2M9 1393 aa12.56□□□□□ -0.4
MECP2-204ENST00000415944 RTEL1-TNFRSF6BF6WH68 1400 aa12.55□□□□□ -0.4
MECP2-204ENST00000415944 ABCC5O15440 1437 aa12.55□□□□□ -0.4
MECP2-204ENST00000415944 HFM1A2PYH4 1435 aa12.54□□□□□ -0.4
MECP2-204ENST00000415944 YEATS2Q9ULM3 1422 aa12.54□□□□□ -0.4
MECP2-204ENST00000415944 PLXNC1O60486 1568 aa12.54□□□□□ -0.4
MECP2-204ENST00000415944 REREQ9P2R6 1566 aa12.54□□□□□ -0.4
MECP2-204ENST00000415944 ADGBQ8N7X0 1667 aa12.54□□□□□ -0.4
MECP2-204ENST00000415944 FAM50AQ14320 339 aaKnown RBP12.53□□□□□ -0.4
MECP2-204ENST00000415944 SPAG9O60271 1321 aaKnown RBP12.53□□□□□ -0.4
MECP2-204ENST00000415944 C9orf84Q5VXU9 1444 aa12.53□□□□□ -0.4
MECP2-204ENST00000415944 ADGRL2O95490 1459 aa12.52□□□□□ -0.41
MECP2-204ENST00000415944 SIGLEC1Q9BZZ2 1709 aa12.51□□□□□ -0.41
MECP2-204ENST00000415944 CENPBP07199 599 aaPredicted RBP12.51□□□□□ -0.41
MECP2-204ENST00000415944 PTPRKQ15262 1439 aa12.5□□□□□ -0.41
MECP2-204ENST00000415944 ATP10AO60312 1499 aa12.5□□□□□ -0.41
MECP2-204ENST00000415944 TSPY4P0CV99 314 aa12.49□□□□□ -0.41
MECP2-204ENST00000415944 TSPY10P0CW01 314 aa12.49□□□□□ -0.41
MECP2-204ENST00000415944 ROCK1Q13464 1354 aa12.48□□□□□ -0.41
MECP2-204ENST00000415944 BCORL1Q5H9F3 1711 aa12.48□□□□□ -0.41
MECP2-204ENST00000415944 AGLP35573 1532 aa12.47□□□□□ -0.41
MECP2-204ENST00000415944 A2MP01023 1474 aa12.46□□□□□ -0.41
MECP2-204ENST00000415944 NCOA1Q15788 1441 aa12.46□□□□□ -0.41
MECP2-204ENST00000415944 DUOX2Q9NRD8 1548 aa12.46□□□□□ -0.42
MECP2-204ENST00000415944 EIF2AK4Q9P2K8 1649 aaKnown RBP12.45□□□□□ -0.42
MECP2-204ENST00000415944 ANKRD30AQ9BXX3 1397 aa12.44□□□□□ -0.42
MECP2-204ENST00000415944 KIF15Q9NS87 1388 aa12.44□□□□□ -0.42
MECP2-204ENST00000415944 MYT1LQ9UL68 1186 aa12.44□□□□□ -0.42
MECP2-204ENST00000415944 DHX29Q7Z478 1369 aaKnown RBP12.43□□□□□ -0.42
MECP2-204ENST00000415944 GCC2Q8IWJ2 1684 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms