RNA–Protein interactions for RNA: ENST00000415696.1

KARSP2-201, Transcript of lysyl-tRNA synthetase pseudogene 2, humanhuman

BASIC

Gene KARSP2, Length 1,639 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARSP2-201ENST00000415696 DNAJC5Q9H3Z4 198 aa10.73□□□□□ -0.69
KARSP2-201ENST00000415696 KDM5BQ9UGL1 1544 aa10.73□□□□□ -0.69
KARSP2-201ENST00000415696 CLSPNQ9HAW4 1339 aa10.71□□□□□ -0.69
KARSP2-201ENST00000415696 SETD5Q9C0A6 1442 aa10.71□□□□□ -0.69
KARSP2-201ENST00000415696 CFDP1Q9UEE9 299 aaPredicted RBP10.71□□□□□ -0.69
KARSP2-201ENST00000415696 GPATCH8Q9UKJ3 1502 aaKnown RBP10.7□□□□□ -0.7
KARSP2-201ENST00000415696 SLC4A1APQ9BWU0 796 aaKnown RBP10.69□□□□□ -0.7
KARSP2-201ENST00000415696 AKNAQ7Z591 1439 aa10.69□□□□□ -0.7
KARSP2-201ENST00000415696 ABCC10Q5T3U5 1492 aa10.69□□□□□ -0.7
KARSP2-201ENST00000415696 ZCCHC11Q5TAX3 1644 aaKnown RBP10.69□□□□□ -0.7
KARSP2-201ENST00000415696 DMRT2Q9Y5R5 561 aa10.69□□□□□ -0.7
KARSP2-201ENST00000415696 NPM1P06748 294 aaKnown RBP eCLIP10.68□□□□□ -0.7
KARSP2-201ENST00000415696 HFM1A2PYH4 1435 aa10.68□□□□□ -0.7
KARSP2-201ENST00000415696 RAB3GAP2Q9H2M9 1393 aa10.67□□□□□ -0.7
KARSP2-201ENST00000415696 CAMSAP2Q08AD1 1489 aa10.66□□□□□ -0.7
KARSP2-201ENST00000415696 ROCK1Q13464 1354 aa10.66□□□□□ -0.7
KARSP2-201ENST00000415696 DNMT1P26358 1616 aaKnown RBP10.66□□□□□ -0.7
KARSP2-201ENST00000415696 DAPK1P53355 1430 aa10.65□□□□□ -0.7
KARSP2-201ENST00000415696 PLEKHH2Q8IVE3 1493 aa10.65□□□□□ -0.7
KARSP2-201ENST00000415696 RSPH4AQ5TD94 716 aa10.65□□□□□ -0.7
KARSP2-201ENST00000415696 PREX2Q70Z35 1606 aa10.64□□□□□ -0.71
KARSP2-201ENST00000415696 WDR7Q9Y4E6 1490 aa10.64□□□□□ -0.71
KARSP2-201ENST00000415696 RNF216Q9NWF9 866 aaPredicted RBP10.64□□□□□ -0.71
KARSP2-201ENST00000415696 CDC42BPAQ5VT25 1732 aa10.64□□□□□ -0.71
KARSP2-201ENST00000415696 ZNF777Q9ULD5 760 aaPredicted RBP10.62□□□□□ -0.71
KARSP2-201ENST00000415696 DHX57Q6P158 1386 aaKnown RBP10.62□□□□□ -0.71
KARSP2-201ENST00000415696 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.62□□□□□ -0.71
KARSP2-201ENST00000415696 ARAP3Q8WWN8 1544 aa10.62□□□□□ -0.71
KARSP2-201ENST00000415696 MYO5CQ9NQX4 1742 aa10.62□□□□□ -0.71
KARSP2-201ENST00000415696 ABCC5O15440 1437 aa10.61□□□□□ -0.71
KARSP2-201ENST00000415696 NAIPQ13075 1403 aa10.61□□□□□ -0.71
KARSP2-201ENST00000415696 SHANK2Q9UPX8 1470 aa10.61□□□□□ -0.71
KARSP2-201ENST00000415696 ARHGAP5Q13017 1502 aa10.61□□□□□ -0.71
KARSP2-201ENST00000415696 GCC2Q8IWJ2 1684 aa10.61□□□□□ -0.71
KARSP2-201ENST00000415696 PTPRKQ15262 1439 aa10.61□□□□□ -0.71
KARSP2-201ENST00000415696 ARHGEF5Q12774 1597 aa10.61□□□□□ -0.71
KARSP2-201ENST00000415696 TSPY4P0CV99 314 aa10.6□□□□□ -0.71
KARSP2-201ENST00000415696 TSPY10P0CW01 314 aa10.6□□□□□ -0.71
KARSP2-201ENST00000415696 KCNH8Q96L42 1107 aa10.6□□□□□ -0.71
KARSP2-201ENST00000415696 TTC37Q6PGP7 1564 aa10.59□□□□□ -0.71
KARSP2-201ENST00000415696 PLCH2O75038 1416 aa10.59□□□□□ -0.71
KARSP2-201ENST00000415696 ANKRD30AQ9BXX3 1397 aa10.59□□□□□ -0.71
KARSP2-201ENST00000415696 EFCAB2Q5VUJ9 269 aa10.59□□□□□ -0.71
KARSP2-201ENST00000415696 ADGBQ8N7X0 1667 aa10.59□□□□□ -0.71
KARSP2-201ENST00000415696 ADGRL2O95490 1459 aa10.59□□□□□ -0.71
KARSP2-201ENST00000415696 ASXL2Q76L83 1435 aa10.59□□□□□ -0.71
KARSP2-201ENST00000415696 KIAA1107Q9UPP5 1409 aa10.59□□□□□ -0.71
KARSP2-201ENST00000415696 ZNF644Q9H582 1327 aaPredicted RBP10.59□□□□□ -0.71
KARSP2-201ENST00000415696 CROCC2H7BZ55 1655 aa10.58□□□□□ -0.72
KARSP2-201ENST00000415696 CCDC141Q6ZP82 1450 aa10.58□□□□□ -0.72
KARSP2-201ENST00000415696 CDC42BPBQ9Y5S2 1711 aa10.57□□□□□ -0.72
KARSP2-201ENST00000415696 CHIC2Q9UKJ5 165 aa10.57□□□□□ -0.72
KARSP2-201ENST00000415696 ABCA9Q8IUA7 1624 aa10.56□□□□□ -0.72
KARSP2-201ENST00000415696 HOXD11P31277 338 aaPredicted RBP10.56□□□□□ -0.72
KARSP2-201ENST00000415696 C9orf84Q5VXU9 1444 aa10.56□□□□□ -0.72
KARSP2-201ENST00000415696 SAMD9LQ8IVG5 1584 aa10.56□□□□□ -0.72
KARSP2-201ENST00000415696 RRP7BPQ9NSQ0 103 aa10.55□□□□□ -0.72
KARSP2-201ENST00000415696 NCOA1Q15788 1441 aa10.55□□□□□ -0.72
KARSP2-201ENST00000415696 MBD5Q9P267 1494 aa10.55□□□□□ -0.72
KARSP2-201ENST00000415696 RIMBP3CA6NJZ7 1639 aa10.55□□□□□ -0.72
KARSP2-201ENST00000415696 RIMBP3BA6NNM3 1639 aa10.55□□□□□ -0.72
KARSP2-201ENST00000415696 RIMBP3Q9UFD9 1639 aa10.55□□□□□ -0.72
KARSP2-201ENST00000415696 MAPKBP1O60336 1514 aa10.54□□□□□ -0.72
KARSP2-201ENST00000415696 MAST1Q9Y2H9 1570 aa10.53□□□□□ -0.72
KARSP2-201ENST00000415696 TIMELESSQ9UNS1 1208 aa10.53□□□□□ -0.72
KARSP2-201ENST00000415696 SYCP2Q9BX26 1530 aa10.53□□□□□ -0.72
KARSP2-201ENST00000415696 CFAP74Q9C0B2 1584 aa10.52□□□□□ -0.72
KARSP2-201ENST00000415696 ABCC1P33527 1531 aa10.52□□□□□ -0.73
KARSP2-201ENST00000415696 HNRNPMP52272 730 aaKnown RBP eCLIP10.51□□□□□ -0.73
KARSP2-201ENST00000415696 FANCAO15360 1455 aa10.51□□□□□ -0.73
KARSP2-201ENST00000415696 CYB5RLQ6IPT4 315 aa10.51□□□□□ -0.73
KARSP2-201ENST00000415696 TRIM52Q96A61 297 aa10.51□□□□□ -0.73
KARSP2-201ENST00000415696 ANKRD50Q9ULJ7 1429 aa10.5□□□□□ -0.73
KARSP2-201ENST00000415696 KIF15Q9NS87 1388 aa10.49□□□□□ -0.73
KARSP2-201ENST00000415696 CD109Q6YHK3 1445 aa10.49□□□□□ -0.73
KARSP2-201ENST00000415696 PLXNC1O60486 1568 aa10.49□□□□□ -0.73
KARSP2-201ENST00000415696 RTEL1-TNFRSF6BF6WH68 1400 aa10.48□□□□□ -0.73
KARSP2-201ENST00000415696 ADGRL1O94910 1474 aa10.47□□□□□ -0.73
KARSP2-201ENST00000415696 GLI2P10070 1586 aa10.46□□□□□ -0.73
KARSP2-201ENST00000415696 SPAG9O60271 1321 aaKnown RBP10.46□□□□□ -0.74
KARSP2-201ENST00000415696 DUOX2Q9NRD8 1548 aa10.46□□□□□ -0.74
KARSP2-201ENST00000415696 ERBINQ96RT1 1412 aa10.45□□□□□ -0.74
KARSP2-201ENST00000415696 NEO1Q92859 1461 aa10.45□□□□□ -0.74
KARSP2-201ENST00000415696 MPHOSPH9Q99550 1183 aa10.45□□□□□ -0.74
KARSP2-201ENST00000415696 KDM6BO15054 1643 aa10.45□□□□□ -0.74
KARSP2-201ENST00000415696 ARHGEF12Q9NZN5 1544 aa10.44□□□□□ -0.74
KARSP2-201ENST00000415696 SCAPERQ9BY12 1400 aa10.44□□□□□ -0.74
KARSP2-201ENST00000415696 ZNF518AQ6AHZ1 1483 aa10.44□□□□□ -0.74
KARSP2-201ENST00000415696 KDM5DQ9BY66 1539 aa10.44□□□□□ -0.74
KARSP2-201ENST00000415696 TONSLQ96HA7 1378 aa10.43□□□□□ -0.74
KARSP2-201ENST00000415696 TRAPPC8Q9Y2L5 1435 aa10.43□□□□□ -0.74
KARSP2-201ENST00000415696 NUP155O75694 1391 aa10.41□□□□□ -0.74
KARSP2-201ENST00000415696 ATP7AQ04656 1500 aa10.41□□□□□ -0.74
KARSP2-201ENST00000415696 ZFYVE16Q7Z3T8 1539 aa10.41□□□□□ -0.74
KARSP2-201ENST00000415696 MAP3K4Q9Y6R4 1608 aa10.41□□□□□ -0.74
KARSP2-201ENST00000415696 NEUROD1Q13562 356 aa10.4□□□□□ -0.74
KARSP2-201ENST00000415696 INO80Q9ULG1 1556 aaPredicted RBP10.4□□□□□ -0.74
KARSP2-201ENST00000415696 PZPP20742 1482 aa10.4□□□□□ -0.75
KARSP2-201ENST00000415696 TEX14Q8IWB6 1497 aa10.4□□□□□ -0.75
KARSP2-201ENST00000415696 POGZQ7Z3K3 1410 aa10.4□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms