RNA–Protein interactions for RNA: ENST00000415395.6

RFFL-205, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 1,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-205ENST00000415395 GCC2Q8IWJ2 1684 aa17.06■□□□□ 0.32
RFFL-205ENST00000415395 CROCC2H7BZ55 1655 aa17.05■□□□□ 0.32
RFFL-205ENST00000415395 RAB3GAP2Q9H2M9 1393 aa17.05■□□□□ 0.32
RFFL-205ENST00000415395 CENPBP07199 599 aaPredicted RBP17.05■□□□□ 0.32
RFFL-205ENST00000415395 DAPK1P53355 1430 aa17.05■□□□□ 0.32
RFFL-205ENST00000415395 SCAF1Q9H7N4 1312 aaKnown RBP17.05■□□□□ 0.32
RFFL-205ENST00000415395 WDR7Q9Y4E6 1490 aa17.05■□□□□ 0.32
RFFL-205ENST00000415395 CLSPNQ9HAW4 1339 aa17.04■□□□□ 0.32
RFFL-205ENST00000415395 ARAP3Q8WWN8 1544 aa17.02■□□□□ 0.32
RFFL-205ENST00000415395 ROCK1Q13464 1354 aa17.02■□□□□ 0.32
RFFL-205ENST00000415395 ADGBQ8N7X0 1667 aa17.02■□□□□ 0.32
RFFL-205ENST00000415395 ARHGEF5Q12774 1597 aa17.02■□□□□ 0.31
RFFL-205ENST00000415395 ABCC5O15440 1437 aa17.02■□□□□ 0.31
RFFL-205ENST00000415395 RIMBP3CA6NJZ7 1639 aa17.02■□□□□ 0.31
RFFL-205ENST00000415395 RIMBP3BA6NNM3 1639 aa17.02■□□□□ 0.31
RFFL-205ENST00000415395 RIMBP3Q9UFD9 1639 aa17.02■□□□□ 0.31
RFFL-205ENST00000415395 DIEXFQ68CQ4 756 aaKnown RBP17.01■□□□□ 0.31
RFFL-205ENST00000415395 DHX57Q6P158 1386 aaKnown RBP17■□□□□ 0.31
RFFL-205ENST00000415395 NAIPQ13075 1403 aa17■□□□□ 0.31
RFFL-205ENST00000415395 SHANK2Q9UPX8 1470 aa17■□□□□ 0.31
RFFL-205ENST00000415395 SAMD9LQ8IVG5 1584 aa16.99■□□□□ 0.31
RFFL-205ENST00000415395 ABCA9Q8IUA7 1624 aa16.99■□□□□ 0.31
RFFL-205ENST00000415395 ACIN1Q9UKV3 1341 aaKnown RBP16.99■□□□□ 0.31
RFFL-205ENST00000415395 PLEKHH2Q8IVE3 1493 aa16.99■□□□□ 0.31
RFFL-205ENST00000415395 ZNF644Q9H582 1327 aaPredicted RBP16.98■□□□□ 0.31
RFFL-205ENST00000415395 ARHGAP5Q13017 1502 aa16.98■□□□□ 0.31
RFFL-205ENST00000415395 NPM1P06748 294 aaKnown RBP eCLIP16.98■□□□□ 0.31
RFFL-205ENST00000415395 PLCH2O75038 1416 aa16.98■□□□□ 0.31
RFFL-205ENST00000415395 ASXL2Q76L83 1435 aa16.98■□□□□ 0.31
RFFL-205ENST00000415395 ADGRL2O95490 1459 aa16.98■□□□□ 0.31
RFFL-205ENST00000415395 RSPH4AQ5TD94 716 aa16.95■□□□□ 0.3
RFFL-205ENST00000415395 KIAA1107Q9UPP5 1409 aa16.94■□□□□ 0.3
RFFL-205ENST00000415395 KCNH8Q96L42 1107 aa16.94■□□□□ 0.3
RFFL-205ENST00000415395 ZNF777Q9ULD5 760 aaPredicted RBP16.94■□□□□ 0.3
RFFL-205ENST00000415395 MBD5Q9P267 1494 aa16.93■□□□□ 0.3
RFFL-205ENST00000415395 MAPKBP1O60336 1514 aa16.93■□□□□ 0.3
RFFL-205ENST00000415395 CCDC141Q6ZP82 1450 aa16.92■□□□□ 0.3
RFFL-205ENST00000415395 MAST1Q9Y2H9 1570 aa16.91■□□□□ 0.3
RFFL-205ENST00000415395 ZNF316A6NFI3 1004 aaPredicted RBP16.9■□□□□ 0.3
RFFL-205ENST00000415395 NCOA1Q15788 1441 aa16.9■□□□□ 0.3
RFFL-205ENST00000415395 CHIC2Q9UKJ5 165 aa16.9■□□□□ 0.3
RFFL-205ENST00000415395 ABCC1P33527 1531 aa16.9■□□□□ 0.3
RFFL-205ENST00000415395 SYCP2Q9BX26 1530 aa16.9■□□□□ 0.3
RFFL-205ENST00000415395 C9orf84Q5VXU9 1444 aa16.89■□□□□ 0.29
RFFL-205ENST00000415395 EFCAB2Q5VUJ9 269 aa16.89■□□□□ 0.29
RFFL-205ENST00000415395 ANKRD30AQ9BXX3 1397 aa16.89■□□□□ 0.29
RFFL-205ENST00000415395 RRP7BPQ9NSQ0 103 aa16.87■□□□□ 0.29
RFFL-205ENST00000415395 CFAP74Q9C0B2 1584 aa16.87■□□□□ 0.29
RFFL-205ENST00000415395 TSPY4P0CV99 314 aa16.86■□□□□ 0.29
RFFL-205ENST00000415395 TSPY10P0CW01 314 aa16.86■□□□□ 0.29
RFFL-205ENST00000415395 KDM6BO15054 1643 aa16.85■□□□□ 0.29
RFFL-205ENST00000415395 PLXNC1O60486 1568 aa16.84■□□□□ 0.29
RFFL-205ENST00000415395 FANCAO15360 1455 aa16.84■□□□□ 0.29
RFFL-205ENST00000415395 HNRNPMP52272 730 aaKnown RBP eCLIP16.83■□□□□ 0.28
RFFL-205ENST00000415395 CYB5RLQ6IPT4 315 aa16.83■□□□□ 0.28
RFFL-205ENST00000415395 NEUROD1Q13562 356 aa16.82■□□□□ 0.28
RFFL-205ENST00000415395 GLI2P10070 1586 aa16.81■□□□□ 0.28
RFFL-205ENST00000415395 ARHGEF12Q9NZN5 1544 aa16.81■□□□□ 0.28
RFFL-205ENST00000415395 CD109Q6YHK3 1445 aa16.78■□□□□ 0.28
RFFL-205ENST00000415395 ANKRD50Q9ULJ7 1429 aa16.78■□□□□ 0.28
RFFL-205ENST00000415395 MAP3K4Q9Y6R4 1608 aa16.78■□□□□ 0.28
RFFL-205ENST00000415395 RTEL1-TNFRSF6BF6WH68 1400 aa16.77■□□□□ 0.28
RFFL-205ENST00000415395 KIF15Q9NS87 1388 aa16.77■□□□□ 0.28
RFFL-205ENST00000415395 ADGRL1O94910 1474 aa16.76■□□□□ 0.27
RFFL-205ENST00000415395 TRAPPC8Q9Y2L5 1435 aa16.74■□□□□ 0.27
RFFL-205ENST00000415395 KDM5DQ9BY66 1539 aa16.74■□□□□ 0.27
RFFL-205ENST00000415395 DUOX2Q9NRD8 1548 aa16.74■□□□□ 0.27
RFFL-205ENST00000415395 NEO1Q92859 1461 aa16.74■□□□□ 0.27
RFFL-205ENST00000415395 INO80Q9ULG1 1556 aaPredicted RBP16.74■□□□□ 0.27
RFFL-205ENST00000415395 ZFYVE16Q7Z3T8 1539 aa16.73■□□□□ 0.27
RFFL-205ENST00000415395 DIP2BQ9P265 1576 aa16.72■□□□□ 0.27
RFFL-205ENST00000415395 TRIM52Q96A61 297 aa16.72■□□□□ 0.27
RFFL-205ENST00000415395 TIMELESSQ9UNS1 1208 aa16.72■□□□□ 0.27
RFFL-205ENST00000415395 SCAPERQ9BY12 1400 aa16.71■□□□□ 0.27
RFFL-205ENST00000415395 GTF3C3Q9Y5Q9 886 aa16.71■□□□□ 0.27
RFFL-205ENST00000415395 DENND4BO75064 1496 aaPredicted RBP16.71■□□□□ 0.27
RFFL-205ENST00000415395 ERBINQ96RT1 1412 aa16.71■□□□□ 0.26
RFFL-205ENST00000415395 ZNF518AQ6AHZ1 1483 aa16.7■□□□□ 0.26
RFFL-205ENST00000415395 UNC13BO14795 1591 aa16.69■□□□□ 0.26
RFFL-205ENST00000415395 ATP7AQ04656 1500 aa16.69■□□□□ 0.26
RFFL-205ENST00000415395 MPHOSPH9Q99550 1183 aa16.69■□□□□ 0.26
RFFL-205ENST00000415395 PZPP20742 1482 aa16.69■□□□□ 0.26
RFFL-205ENST00000415395 SPAG9O60271 1321 aaKnown RBP16.69■□□□□ 0.26
RFFL-205ENST00000415395 KDM5CP41229 1560 aa16.68■□□□□ 0.26
RFFL-205ENST00000415395 POGZQ7Z3K3 1410 aa16.66■□□□□ 0.26
RFFL-205ENST00000415395 MAGI2Q86UL8 1455 aa16.64■□□□□ 0.25
RFFL-205ENST00000415395 KIDINS220Q9ULH0 1771 aa16.64■□□□□ 0.25
RFFL-205ENST00000415395 EIF2AK4Q9P2K8 1649 aaKnown RBP16.64■□□□□ 0.25
RFFL-205ENST00000415395 AFAP1Q8N556 730 aa16.64■□□□□ 0.25
RFFL-205ENST00000415395 SLC4A1APQ9BWU0 796 aaKnown RBP16.63■□□□□ 0.25
RFFL-205ENST00000415395 IQGAP3Q86VI3 1631 aa16.63■□□□□ 0.25
RFFL-205ENST00000415395 MLH3Q9UHC1 1453 aa16.62■□□□□ 0.25
RFFL-205ENST00000415395 MYT1Q01538 1121 aa16.62■□□□□ 0.25
RFFL-205ENST00000415395 HECW2Q9P2P5 1572 aa16.62■□□□□ 0.25
RFFL-205ENST00000415395 TEX14Q8IWB6 1497 aa16.62■□□□□ 0.25
RFFL-205ENST00000415395 NUP155O75694 1391 aa16.61■□□□□ 0.25
RFFL-205ENST00000415395 KIF13AQ9H1H9 1805 aa16.61■□□□□ 0.25
RFFL-205ENST00000415395 PPRC1Q5VV67 1664 aaKnown RBP16.61■□□□□ 0.25
RFFL-205ENST00000415395 SIN3AQ96ST3 1273 aa16.61■□□□□ 0.25
RFFL-205ENST00000415395 RICTORQ6R327 1708 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 99.1 ms