RNA–Protein interactions for RNA: ENST00000415356.1

AC007349.3-201, humanhuman

TSL 1 (best) BASIC

Gene AC007349.3, Length 872 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC007349.3-201ENST00000415356 HECW1Q76N89 1606 aa12.4□□□□□ -0.42
AC007349.3-201ENST00000415356 FANCAO15360 1455 aa12.4□□□□□ -0.42
AC007349.3-201ENST00000415356 ZFYVE16Q7Z3T8 1539 aa12.4□□□□□ -0.42
AC007349.3-201ENST00000415356 CDK13Q14004 1512 aaKnown RBP12.39□□□□□ -0.43
AC007349.3-201ENST00000415356 ZMYM4Q5VZL5 1548 aa12.39□□□□□ -0.43
AC007349.3-201ENST00000415356 CERKQ8TCT0 537 aa12.39□□□□□ -0.43
AC007349.3-201ENST00000415356 CSRNP3Q8WYN3 585 aa12.39□□□□□ -0.43
AC007349.3-201ENST00000415356 CEBPAP49715 358 aaPredicted RBP12.37□□□□□ -0.43
AC007349.3-201ENST00000415356 STRCQ7RTU9 1775 aa12.37□□□□□ -0.43
AC007349.3-201ENST00000415356 DISP3Q9P2K9 1392 aa12.36□□□□□ -0.43
AC007349.3-201ENST00000415356 PLEKHD1A6NEE1 506 aa12.36□□□□□ -0.43
AC007349.3-201ENST00000415356 CFAP74Q9C0B2 1584 aa12.35□□□□□ -0.43
AC007349.3-201ENST00000415356 MAPK8IP2Q13387 824 aaPredicted RBP12.35□□□□□ -0.43
AC007349.3-201ENST00000415356 DMRT2Q9Y5R5 561 aa12.35□□□□□ -0.43
AC007349.3-201ENST00000415356 EFCAB5A4FU69 1503 aa12.35□□□□□ -0.43
AC007349.3-201ENST00000415356 FAM9AQ8IZU1 332 aaPredicted RBP12.34□□□□□ -0.43
AC007349.3-201ENST00000415356 SCAPERQ9BY12 1400 aa12.34□□□□□ -0.43
AC007349.3-201ENST00000415356 ARHGEF12Q9NZN5 1544 aa12.33□□□□□ -0.44
AC007349.3-201ENST00000415356 POGZQ7Z3K3 1410 aa12.33□□□□□ -0.44
AC007349.3-201ENST00000415356 PREX1Q8TCU6 1659 aa12.32□□□□□ -0.44
AC007349.3-201ENST00000415356 KIF14Q15058 1648 aa12.31□□□□□ -0.44
AC007349.3-201ENST00000415356 EHMT2Q96KQ7 1210 aa12.31□□□□□ -0.44
AC007349.3-201ENST00000415356 PLCH2O75038 1416 aa12.29□□□□□ -0.44
AC007349.3-201ENST00000415356 ATP10AO60312 1499 aa12.29□□□□□ -0.44
AC007349.3-201ENST00000415356 MAGI2Q86UL8 1455 aa12.29□□□□□ -0.44
AC007349.3-201ENST00000415356 LRRIQ1Q96JM4 1722 aa12.28□□□□□ -0.44
AC007349.3-201ENST00000415356 MYO5CQ9NQX4 1742 aa12.28□□□□□ -0.44
AC007349.3-201ENST00000415356 SETD1BQ9UPS6 1966 aaKnown RBP12.28□□□□□ -0.44
AC007349.3-201ENST00000415356 C9orf84Q5VXU9 1444 aa12.28□□□□□ -0.44
AC007349.3-201ENST00000415356 AFAP1Q8N556 730 aa12.26□□□□□ -0.45
AC007349.3-201ENST00000415356 C3P01024 1663 aa12.26□□□□□ -0.45
AC007349.3-201ENST00000415356 RNF39Q9H2S5 420 aa12.25□□□□□ -0.45
AC007349.3-201ENST00000415356 ATP1B4Q9UN42 357 aaPredicted RBP12.25□□□□□ -0.45
AC007349.3-201ENST00000415356 DIP2CQ9Y2E4 1556 aa12.25□□□□□ -0.45
AC007349.3-201ENST00000415356 ABCA6Q8N139 1617 aa12.25□□□□□ -0.45
AC007349.3-201ENST00000415356 CDC42BPBQ9Y5S2 1711 aa12.24□□□□□ -0.45
AC007349.3-201ENST00000415356 KDM5CP41229 1560 aa12.23□□□□□ -0.45
AC007349.3-201ENST00000415356 SPATA31D1Q6ZQQ2 1576 aa12.23□□□□□ -0.45
AC007349.3-201ENST00000415356 EFCAB2Q5VUJ9 269 aa12.22□□□□□ -0.45
AC007349.3-201ENST00000415356 LTBP4Q8N2S1 1624 aa12.22□□□□□ -0.45
AC007349.3-201ENST00000415356 ARHGAP35Q9NRY4 1499 aa12.21□□□□□ -0.45
AC007349.3-201ENST00000415356 UHRF1BP1Q6BDS2 1440 aa12.21□□□□□ -0.45
AC007349.3-201ENST00000415356 ARHGAP5Q13017 1502 aa12.21□□□□□ -0.46
AC007349.3-201ENST00000415356 EEA1Q15075 1411 aa12.2□□□□□ -0.46
AC007349.3-201ENST00000415356 TRAPPC8Q9Y2L5 1435 aa12.2□□□□□ -0.46
AC007349.3-201ENST00000415356 ZNF518AQ6AHZ1 1483 aa12.19□□□□□ -0.46
AC007349.3-201ENST00000415356 MYT1LQ9UL68 1186 aa12.18□□□□□ -0.46
AC007349.3-201ENST00000415356 TROQ12816 1431 aaPredicted RBP12.18□□□□□ -0.46
AC007349.3-201ENST00000415356 KIDINS220Q9ULH0 1771 aa12.18□□□□□ -0.46
AC007349.3-201ENST00000415356 ITSN2Q9NZM3 1697 aa12.16□□□□□ -0.46
AC007349.3-201ENST00000415356 PTPRTO14522 1441 aa12.16□□□□□ -0.46
AC007349.3-201ENST00000415356 REREQ9P2R6 1566 aa12.16□□□□□ -0.46
AC007349.3-201ENST00000415356 DCAF8L1A6NGE4 600 aa12.15□□□□□ -0.46
AC007349.3-201ENST00000415356 ABCC1P33527 1531 aa12.15□□□□□ -0.46
AC007349.3-201ENST00000415356 PREX2Q70Z35 1606 aa12.15□□□□□ -0.47
AC007349.3-201ENST00000415356 MLH3Q9UHC1 1453 aa12.14□□□□□ -0.47
AC007349.3-201ENST00000415356 CDC42BPAQ5VT25 1732 aa12.14□□□□□ -0.47
AC007349.3-201ENST00000415356 NCOA1Q15788 1441 aa12.14□□□□□ -0.47
AC007349.3-201ENST00000415356 UBTFP17480 764 aaKnown RBP12.14□□□□□ -0.47
AC007349.3-201ENST00000415356 FMN1Q68DA7 1419 aa12.13□□□□□ -0.47
AC007349.3-201ENST00000415356 AGLP35573 1532 aa12.13□□□□□ -0.47
AC007349.3-201ENST00000415356 NCKAP5LQ9HCH0 1330 aa12.12□□□□□ -0.47
AC007349.3-201ENST00000415356 CAMSAP1Q5T5Y3 1602 aa12.12□□□□□ -0.47
AC007349.3-201ENST00000415356 ZNF335Q9H4Z2 1342 aaPredicted RBP12.11□□□□□ -0.47
AC007349.3-201ENST00000415356 SUPT6HQ7KZ85 1726 aaKnown RBP12.11□□□□□ -0.47
AC007349.3-201ENST00000415356 SAMD9LQ8IVG5 1584 aa12.09□□□□□ -0.47
AC007349.3-201ENST00000415356 CDK11AQ9UQ88 783 aaPredicted RBP12.09□□□□□ -0.47
AC007349.3-201ENST00000415356 CLTCQ00610 1675 aaKnown RBP12.09□□□□□ -0.47
AC007349.3-201ENST00000415356 CLIP1P30622 1438 aa12.08□□□□□ -0.48
AC007349.3-201ENST00000415356 MROH2AA6NES4 1674 aa12.06□□□□□ -0.48
AC007349.3-201ENST00000415356 SYCP2Q9BX26 1530 aa12.06□□□□□ -0.48
AC007349.3-201ENST00000415356 ZMYM3Q14202 1370 aa12.06□□□□□ -0.48
AC007349.3-201ENST00000415356 ESF1Q9H501 851 aaKnown RBP12.06□□□□□ -0.48
AC007349.3-201ENST00000415356 ZNF777Q9ULD5 760 aaPredicted RBP12.06□□□□□ -0.48
AC007349.3-201ENST00000415356 MYO3AQ8NEV4 1616 aa12.06□□□□□ -0.48
AC007349.3-201ENST00000415356 IQSEC2Q5JU85 1478 aa12.06□□□□□ -0.48
AC007349.3-201ENST00000415356 UBAP1LF5GYI3 381 aa12.05□□□□□ -0.48
AC007349.3-201ENST00000415356 HNRNPMP52272 730 aaKnown RBP eCLIP12.05□□□□□ -0.48
AC007349.3-201ENST00000415356 ZNF142P52746 1687 aaPredicted RBP12.04□□□□□ -0.48
AC007349.3-201ENST00000415356 CNTLNQ9NXG0 1405 aa12.03□□□□□ -0.48
AC007349.3-201ENST00000415356 NPATQ14207 1427 aa12.03□□□□□ -0.48
AC007349.3-201ENST00000415356 PTPRKQ15262 1439 aa12.03□□□□□ -0.48
AC007349.3-201ENST00000415356 CASKIN1Q8WXD9 1431 aa12.03□□□□□ -0.48
AC007349.3-201ENST00000415356 GPATCH8Q9UKJ3 1502 aaKnown RBP12.02□□□□□ -0.48
AC007349.3-201ENST00000415356 PLXNC1O60486 1568 aa12.02□□□□□ -0.49
AC007349.3-201ENST00000415356 CEP170BQ9Y4F5 1589 aaPredicted RBP12.02□□□□□ -0.49
AC007349.3-201ENST00000415356 TCOF1Q13428 1488 aaKnown RBP12.02□□□□□ -0.49
AC007349.3-201ENST00000415356 INO80Q9ULG1 1556 aaPredicted RBP12.01□□□□□ -0.49
AC007349.3-201ENST00000415356 ATP7AQ04656 1500 aa12.01□□□□□ -0.49
AC007349.3-201ENST00000415356 SPAG9O60271 1321 aaKnown RBP12□□□□□ -0.49
AC007349.3-201ENST00000415356 CCDC18Q5T9S5 1454 aa12□□□□□ -0.49
AC007349.3-201ENST00000415356 GGT6Q6P531 493 aa11.99□□□□□ -0.49
AC007349.3-201ENST00000415356 DNMT1P26358 1616 aaKnown RBP11.98□□□□□ -0.49
AC007349.3-201ENST00000415356 A2MP01023 1474 aa11.98□□□□□ -0.49
AC007349.3-201ENST00000415356 PLA2R1Q13018 1463 aa11.98□□□□□ -0.49
AC007349.3-201ENST00000415356 ZNF644Q9H582 1327 aaPredicted RBP11.98□□□□□ -0.49
AC007349.3-201ENST00000415356 HSPA1LP34931 641 aa11.98□□□□□ -0.49
AC007349.3-201ENST00000415356 MED1Q15648 1581 aaPredicted RBP11.97□□□□□ -0.49
AC007349.3-201ENST00000415356 NEURL4Q96JN8 1562 aa11.97□□□□□ -0.49
AC007349.3-201ENST00000415356 ALKQ9UM73 1620 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms