RNA–Protein interactions for RNA: ENST00000414120.1

LINC00887-202, long intergenic non-protein coding RNA 887, humanhuman

TSL 3 BASIC

Gene LINC00887, Length 2,880 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00887-202ENST00000414120 BBXQ8WY36 941 aaPredicted RBP18.66■□□□□ 0.58
LINC00887-202ENST00000414120 ITGAEP38570 1179 aa18.66■□□□□ 0.58
LINC00887-202ENST00000414120 DHX37Q8IY37 1157 aaKnown RBP18.65■□□□□ 0.58
LINC00887-202ENST00000414120 JPH4Q96JJ6 628 aa18.64■□□□□ 0.58
LINC00887-202ENST00000414120 CEP170Q5SW79 1584 aa18.64■□□□□ 0.58
LINC00887-202ENST00000414120 KIF21BO75037 1637 aa18.64■□□□□ 0.57
LINC00887-202ENST00000414120 CNKSR2Q8WXI2 1034 aa18.64■□□□□ 0.57
LINC00887-202ENST00000414120 CHRM1P11229 460 aaPredicted RBP18.63■□□□□ 0.57
LINC00887-202ENST00000414120 GTF2E1P29083 439 aaPredicted RBP18.62■□□□□ 0.57
LINC00887-202ENST00000414120 NUP160Q12769 1436 aa18.62■□□□□ 0.57
LINC00887-202ENST00000414120 TEX2Q8IWB9 1127 aa18.61■□□□□ 0.57
LINC00887-202ENST00000414120 FBXO3Q9UK99 471 aa18.61■□□□□ 0.57
LINC00887-202ENST00000414120 CANXP27824 592 aaKnown RBP18.61■□□□□ 0.57
LINC00887-202ENST00000414120 ZBTB47Q9UFB7 747 aaPredicted RBP18.61■□□□□ 0.57
LINC00887-202ENST00000414120 PPM1GO15355 546 aaPredicted RBP18.59■□□□□ 0.57
LINC00887-202ENST00000414120 ANP32AP39687 249 aaKnown RBP18.59■□□□□ 0.57
LINC00887-202ENST00000414120 GSE1Q14687 1217 aa18.59■□□□□ 0.57
LINC00887-202ENST00000414120 KIAA0586Q9BVV6 1533 aa18.58■□□□□ 0.56
LINC00887-202ENST00000414120 CNGB1Q14028 1251 aaPredicted RBP18.57■□□□□ 0.56
LINC00887-202ENST00000414120 HSP90B1P14625 803 aaKnown RBP18.57■□□□□ 0.56
LINC00887-202ENST00000414120 AMER1Q5JTC6 1135 aaPredicted RBP18.55■□□□□ 0.56
LINC00887-202ENST00000414120 STAC3Q96MF2 364 aa18.55■□□□□ 0.56
LINC00887-202ENST00000414120 FTSJ3Q8IY81 847 aaKnown RBP18.54■□□□□ 0.56
LINC00887-202ENST00000414120 PDCL3Q9H2J4 239 aa18.54■□□□□ 0.56
LINC00887-202ENST00000414120 PRG4Q92954 1404 aaPredicted RBP18.53■□□□□ 0.56
LINC00887-202ENST00000414120 TNIKQ9UKE5 1360 aa18.53■□□□□ 0.56
LINC00887-202ENST00000414120 CHMP4BQ9H444 224 aaKnown RBP18.53■□□□□ 0.56
LINC00887-202ENST00000414120 IQGAP2Q13576 1575 aa18.53■□□□□ 0.56
LINC00887-202ENST00000414120 ARID4BQ4LE39 1312 aaPredicted RBP18.52■□□□□ 0.56
LINC00887-202ENST00000414120 ATP1B4Q9UN42 357 aaPredicted RBP18.51■□□□□ 0.55
LINC00887-202ENST00000414120 VGFO15240 615 aaPredicted RBP18.5■□□□□ 0.55
LINC00887-202ENST00000414120 CLASP1Q7Z460 1538 aa18.48■□□□□ 0.55
LINC00887-202ENST00000414120 ARID3CA6NKF2 412 aa18.48■□□□□ 0.55
LINC00887-202ENST00000414120 CYB5RLQ6IPT4 315 aa18.48■□□□□ 0.55
LINC00887-202ENST00000414120 CEP162Q5TB80 1403 aa18.47■□□□□ 0.55
LINC00887-202ENST00000414120 CLIP1P30622 1438 aa18.47■□□□□ 0.55
LINC00887-202ENST00000414120 C14orf37Q86TY3 774 aa18.47■□□□□ 0.55
LINC00887-202ENST00000414120 CTTNBP2Q8WZ74 1663 aa18.47■□□□□ 0.55
LINC00887-202ENST00000414120 PPP4R2Q9NY27 417 aa18.45■□□□□ 0.54
LINC00887-202ENST00000414120 ZFP91Q96JP5 570 aaPredicted RBP18.45■□□□□ 0.54
LINC00887-202ENST00000414120 CARMIL2Q6F5E8 1435 aa18.45■□□□□ 0.54
LINC00887-202ENST00000414120 ERCC6L2Q5T890 1561 aa18.45■□□□□ 0.54
LINC00887-202ENST00000414120 DNAJC5Q9H3Z4 198 aa18.44■□□□□ 0.54
LINC00887-202ENST00000414120 FHOD3Q2V2M9 1422 aa18.44■□□□□ 0.54
LINC00887-202ENST00000414120 HAP1P54257 671 aaPredicted RBP18.41■□□□□ 0.54
LINC00887-202ENST00000414120 RGS3P49796 1198 aa18.4■□□□□ 0.54
LINC00887-202ENST00000414120 ARHGEF11O15085 1522 aa18.39■□□□□ 0.54
LINC00887-202ENST00000414120 DISP1Q96F81 1524 aa18.38■□□□□ 0.53
LINC00887-202ENST00000414120 CDK11BP21127 795 aaKnown RBP18.37■□□□□ 0.53
LINC00887-202ENST00000414120 UGGT2Q9NYU1 1516 aa18.37■□□□□ 0.53
LINC00887-202ENST00000414120 PTPRGP23470 1445 aa18.37■□□□□ 0.53
LINC00887-202ENST00000414120 ARHGAP35Q9NRY4 1499 aa18.37■□□□□ 0.53
LINC00887-202ENST00000414120 SMAP1Q8IYB5 467 aaPredicted RBP18.36■□□□□ 0.53
LINC00887-202ENST00000414120 HNRNPUL2Q1KMD3 747 aaKnown RBP18.35■□□□□ 0.53
LINC00887-202ENST00000414120 TPM2P07951 284 aa18.34■□□□□ 0.53
LINC00887-202ENST00000414120 CLCN1P35523 988 aa18.33■□□□□ 0.52
LINC00887-202ENST00000414120 KIAA0556O60303 1618 aa18.32■□□□□ 0.52
LINC00887-202ENST00000414120 PNNQ9H307 717 aaKnown RBP18.32■□□□□ 0.52
LINC00887-202ENST00000414120 ARAP1Q96P48 1450 aa18.32■□□□□ 0.52
LINC00887-202ENST00000414120 UTP14CQ5TAP6 766 aaKnown RBP18.32■□□□□ 0.52
LINC00887-202ENST00000414120 SHROOM2Q13796 1616 aa18.31■□□□□ 0.52
LINC00887-202ENST00000414120 SECISBP2LQ93073 1101 aaKnown RBP18.31■□□□□ 0.52
LINC00887-202ENST00000414120 MAP7D2Q96T17 732 aa18.3■□□□□ 0.52
LINC00887-202ENST00000414120 RNF216Q9NWF9 866 aaPredicted RBP18.3■□□□□ 0.52
LINC00887-202ENST00000414120 RIMBP3CA6NJZ7 1639 aa18.3■□□□□ 0.52
LINC00887-202ENST00000414120 RIMBP3BA6NNM3 1639 aa18.3■□□□□ 0.52
LINC00887-202ENST00000414120 RIMBP3Q9UFD9 1639 aa18.3■□□□□ 0.52
LINC00887-202ENST00000414120 CCER2I3L3R5 266 aa18.28■□□□□ 0.52
LINC00887-202ENST00000414120 EFCAB5A4FU69 1503 aa18.27■□□□□ 0.52
LINC00887-202ENST00000414120 RRAGDQ9NQL2 400 aaPredicted RBP18.27■□□□□ 0.52
LINC00887-202ENST00000414120 PLB1Q6P1J6 1458 aa18.27■□□□□ 0.51
LINC00887-202ENST00000414120 TAOK2Q9UL54 1235 aa18.25■□□□□ 0.51
LINC00887-202ENST00000414120 FRAT1Q92837 279 aaPredicted RBP18.25■□□□□ 0.51
LINC00887-202ENST00000414120 SAMD9Q5K651 1589 aa18.25■□□□□ 0.51
LINC00887-202ENST00000414120 NPM1P06748 294 aaKnown RBP eCLIP18.22■□□□□ 0.51
LINC00887-202ENST00000414120 FMN1Q68DA7 1419 aa18.22■□□□□ 0.51
LINC00887-202ENST00000414120 ANP32BQ92688 251 aaKnown RBP18.21■□□□□ 0.51
LINC00887-202ENST00000414120 TMEM51Q9NW97 253 aa18.2■□□□□ 0.5
LINC00887-202ENST00000414120 UACAQ9BZF9 1416 aa18.19■□□□□ 0.5
LINC00887-202ENST00000414120 ARID3AQ99856 593 aa18.17■□□□□ 0.5
LINC00887-202ENST00000414120 VPS8Q8N3P4 1428 aa18.16■□□□□ 0.5
LINC00887-202ENST00000414120 DCAF11Q8TEB1 546 aa18.15■□□□□ 0.5
LINC00887-202ENST00000414120 L1TD1Q5T7N2 865 aaKnown RBP18.15■□□□□ 0.5
LINC00887-202ENST00000414120 TAF3Q5VWG9 929 aa18.14■□□□□ 0.49
LINC00887-202ENST00000414120 DDRGK1Q96HY6 314 aa18.13■□□□□ 0.49
LINC00887-202ENST00000414120 KCNH8Q96L42 1107 aa18.13■□□□□ 0.49
LINC00887-202ENST00000414120 ZNF830Q96NB3 372 aaPredicted RBP18.13■□□□□ 0.49
LINC00887-202ENST00000414120 MMP14P50281 582 aa18.12■□□□□ 0.49
LINC00887-202ENST00000414120 RGS22Q8NE09 1264 aa18.12■□□□□ 0.49
LINC00887-202ENST00000414120 PCF11O94913 1555 aaKnown RBP18.11■□□□□ 0.49
LINC00887-202ENST00000414120 MTERF4Q7Z6M4 381 aaKnown RBP18.1■□□□□ 0.49
LINC00887-202ENST00000414120 CLGNO14967 610 aa18.09■□□□□ 0.49
LINC00887-202ENST00000414120 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.09■□□□□ 0.49
LINC00887-202ENST00000414120 KIF20AO95235 890 aa18.09■□□□□ 0.49
LINC00887-202ENST00000414120 RAPGEF6Q8TEU7 1601 aa18.08■□□□□ 0.49
LINC00887-202ENST00000414120 CDK13Q14004 1512 aaKnown RBP18.08■□□□□ 0.49
LINC00887-202ENST00000414120 NUP153P49790 1475 aaKnown RBP18.08■□□□□ 0.49
LINC00887-202ENST00000414120 DMTNQ08495 405 aa18.08■□□□□ 0.48
LINC00887-202ENST00000414120 CASKIN1Q8WXD9 1431 aa18.08■□□□□ 0.48
LINC00887-202ENST00000414120 TERF1P54274 439 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms