RNA–Protein interactions for RNA: ENST00000413593.5

TMEM248-202, Transcript of transmembrane protein 248, humanhuman

TSL 4

Gene TMEM248, Length 637 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-202ENST00000413593 ADGRL1O94910 1474 aa15.98■□□□□ 0.15
TMEM248-202ENST00000413593 FRMPD1Q5SYB0 1578 aa15.98■□□□□ 0.15
TMEM248-202ENST00000413593 ARHGAP5Q13017 1502 aa15.98■□□□□ 0.15
TMEM248-202ENST00000413593 SCAPERQ9BY12 1400 aa15.97■□□□□ 0.15
TMEM248-202ENST00000413593 EHBP1L1Q8N3D4 1523 aa15.96■□□□□ 0.15
TMEM248-202ENST00000413593 TIAM1Q13009 1591 aa15.95■□□□□ 0.14
TMEM248-202ENST00000413593 POGZQ7Z3K3 1410 aa15.94■□□□□ 0.14
TMEM248-202ENST00000413593 GPATCH8Q9UKJ3 1502 aaKnown RBP15.94■□□□□ 0.14
TMEM248-202ENST00000413593 PREX2Q70Z35 1606 aa15.94■□□□□ 0.14
TMEM248-202ENST00000413593 CCNB3Q8WWL7 1395 aa15.93■□□□□ 0.14
TMEM248-202ENST00000413593 MAP3K1Q13233 1512 aa15.92■□□□□ 0.14
TMEM248-202ENST00000413593 RICTORQ6R327 1708 aa15.91■□□□□ 0.14
TMEM248-202ENST00000413593 ZMYM4Q5VZL5 1548 aa15.91■□□□□ 0.14
TMEM248-202ENST00000413593 CDC42BPBQ9Y5S2 1711 aa15.91■□□□□ 0.14
TMEM248-202ENST00000413593 KDM4FA0A1W2PPD8 638 aa15.9■□□□□ 0.14
TMEM248-202ENST00000413593 LRRC9Q6ZRR7 1453 aa15.9■□□□□ 0.14
TMEM248-202ENST00000413593 CDC42BPAQ5VT25 1732 aa15.89■□□□□ 0.13
TMEM248-202ENST00000413593 CFDP1Q9UEE9 299 aaPredicted RBP15.89■□□□□ 0.13
TMEM248-202ENST00000413593 NCOA2Q15596 1464 aa15.89■□□□□ 0.13
TMEM248-202ENST00000413593 ABCC1P33527 1531 aa15.89■□□□□ 0.13
TMEM248-202ENST00000413593 ARHGEF12Q9NZN5 1544 aa15.89■□□□□ 0.13
TMEM248-202ENST00000413593 KANK4Q5T7N3 995 aaPredicted RBP15.88■□□□□ 0.13
TMEM248-202ENST00000413593 AFAP1Q8N556 730 aa15.88■□□□□ 0.13
TMEM248-202ENST00000413593 ZNF777Q9ULD5 760 aaPredicted RBP15.88■□□□□ 0.13
TMEM248-202ENST00000413593 ZNF518AQ6AHZ1 1483 aa15.88■□□□□ 0.13
TMEM248-202ENST00000413593 MAGI2Q86UL8 1455 aa15.88■□□□□ 0.13
TMEM248-202ENST00000413593 ARHGEF40Q8TER5 1519 aa15.88■□□□□ 0.13
TMEM248-202ENST00000413593 YEATS2Q9ULM3 1422 aa15.86■□□□□ 0.13
TMEM248-202ENST00000413593 ZFYVE16Q7Z3T8 1539 aa15.86■□□□□ 0.13
TMEM248-202ENST00000413593 TRAPPC8Q9Y2L5 1435 aa15.85■□□□□ 0.13
TMEM248-202ENST00000413593 KDM5CP41229 1560 aa15.85■□□□□ 0.13
TMEM248-202ENST00000413593 SAMD9LQ8IVG5 1584 aa15.85■□□□□ 0.13
TMEM248-202ENST00000413593 APLP2Q06481 763 aa15.85■□□□□ 0.13
TMEM248-202ENST00000413593 SUPT6HQ7KZ85 1726 aaKnown RBP15.84■□□□□ 0.13
TMEM248-202ENST00000413593 KIAA1107Q9UPP5 1409 aa15.84■□□□□ 0.13
TMEM248-202ENST00000413593 PLEKHH2Q8IVE3 1493 aa15.83■□□□□ 0.12
TMEM248-202ENST00000413593 SYCP2Q9BX26 1530 aa15.83■□□□□ 0.12
TMEM248-202ENST00000413593 ZNF644Q9H582 1327 aaPredicted RBP15.82■□□□□ 0.12
TMEM248-202ENST00000413593 HNRNPMP52272 730 aaKnown RBP eCLIP15.81■□□□□ 0.121e-6■■■■■ 30.8
TMEM248-202ENST00000413593 ITSN2Q9NZM3 1697 aa15.81■□□□□ 0.12
TMEM248-202ENST00000413593 MLH3Q9UHC1 1453 aa15.81■□□□□ 0.12
TMEM248-202ENST00000413593 ATP10AO60312 1499 aa15.79■□□□□ 0.12
TMEM248-202ENST00000413593 ARID4BQ4LE39 1312 aaPredicted RBP15.79■□□□□ 0.12
TMEM248-202ENST00000413593 HECW2Q9P2P5 1572 aa15.79■□□□□ 0.12
TMEM248-202ENST00000413593 MYT1LQ9UL68 1186 aa15.78■□□□□ 0.12
TMEM248-202ENST00000413593 MBD5Q9P267 1494 aa15.78■□□□□ 0.12
TMEM248-202ENST00000413593 C9orf84Q5VXU9 1444 aa15.77■□□□□ 0.12
TMEM248-202ENST00000413593 MYOM3Q5VTT5 1437 aa15.76■□□□□ 0.11
TMEM248-202ENST00000413593 DIP2CQ9Y2E4 1556 aa15.75■□□□□ 0.11
TMEM248-202ENST00000413593 SPAG9O60271 1321 aaKnown RBP15.75■□□□□ 0.11
TMEM248-202ENST00000413593 CAMSAP2Q08AD1 1489 aa15.75■□□□□ 0.11
TMEM248-202ENST00000413593 ABCA6Q8N139 1617 aa15.73■□□□□ 0.11
TMEM248-202ENST00000413593 ADRA2BP18089 450 aa15.73■□□□□ 0.11
TMEM248-202ENST00000413593 MIA2Q96PC5 1412 aa15.73■□□□□ 0.11
TMEM248-202ENST00000413593 SIGLEC1Q9BZZ2 1709 aa15.73■□□□□ 0.11
TMEM248-202ENST00000413593 PPP6R1Q9UPN7 881 aa15.72■□□□□ 0.11
TMEM248-202ENST00000413593 ADAMTSL3P82987 1691 aa15.72■□□□□ 0.11
TMEM248-202ENST00000413593 KIDINS220Q9ULH0 1771 aa15.72■□□□□ 0.11
TMEM248-202ENST00000413593 BCORL1Q5H9F3 1711 aa15.71■□□□□ 0.11
TMEM248-202ENST00000413593 REREQ9P2R6 1566 aa15.71■□□□□ 0.11
TMEM248-202ENST00000413593 ATP7AQ04656 1500 aa15.71■□□□□ 0.11
TMEM248-202ENST00000413593 CCDC141Q6ZP82 1450 aa15.71■□□□□ 0.1
TMEM248-202ENST00000413593 RSPH4AQ5TD94 716 aa15.7■□□□□ 0.1
TMEM248-202ENST00000413593 INO80Q9ULG1 1556 aaPredicted RBP15.7■□□□□ 0.1
TMEM248-202ENST00000413593 MLECQ14165 292 aa15.69■□□□□ 0.1
TMEM248-202ENST00000413593 RTEL1-TNFRSF6BF6WH68 1400 aa15.68■□□□□ 0.1
TMEM248-202ENST00000413593 AGLP35573 1532 aa15.68■□□□□ 0.1
TMEM248-202ENST00000413593 ARHGEF5Q12774 1597 aa15.67■□□□□ 0.1
TMEM248-202ENST00000413593 PTPRMP28827 1452 aa15.67■□□□□ 0.1
TMEM248-202ENST00000413593 MADDQ8WXG6 1647 aa15.67■□□□□ 0.1
TMEM248-202ENST00000413593 FGD6Q6ZV73 1430 aa15.66■□□□□ 0.1
TMEM248-202ENST00000413593 A2MP01023 1474 aa15.65■□□□□ 0.1
TMEM248-202ENST00000413593 TSPY4P0CV99 314 aa15.64■□□□□ 0.09
TMEM248-202ENST00000413593 TSPY10P0CW01 314 aa15.64■□□□□ 0.09
TMEM248-202ENST00000413593 PIAS4Q8N2W9 510 aaPredicted RBP15.64■□□□□ 0.09
TMEM248-202ENST00000413593 TCOF1Q13428 1488 aaKnown RBP15.63■□□□□ 0.09
TMEM248-202ENST00000413593 PLXNC1O60486 1568 aa15.62■□□□□ 0.09
TMEM248-202ENST00000413593 PTPN23Q9H3S7 1636 aa15.62■□□□□ 0.09
TMEM248-202ENST00000413593 DHX29Q7Z478 1369 aaKnown RBP15.61■□□□□ 0.09
TMEM248-202ENST00000413593 RIMS1Q86UR5 1692 aaKnown RBP15.6■□□□□ 0.09
TMEM248-202ENST00000413593 ABCC5O15440 1437 aa15.59■□□□□ 0.09
TMEM248-202ENST00000413593 MAST1Q9Y2H9 1570 aa15.58■□□□□ 0.09
TMEM248-202ENST00000413593 PPARGC1BQ86YN6 1023 aaKnown RBP15.58■□□□□ 0.08
TMEM248-202ENST00000413593 ADGBQ8N7X0 1667 aa15.57■□□□□ 0.08
TMEM248-202ENST00000413593 DAPK1P53355 1430 aa15.57■□□□□ 0.08
TMEM248-202ENST00000413593 SHANK2Q9UPX8 1470 aa15.57■□□□□ 0.08
TMEM248-202ENST00000413593 FER1L4A9Z1Z3 1794 aa15.57■□□□□ 0.08
TMEM248-202ENST00000413593 ESF1Q9H501 851 aaKnown RBP15.55■□□□□ 0.08
TMEM248-202ENST00000413593 DNMT1P26358 1616 aaKnown RBP15.54■□□□□ 0.08
TMEM248-202ENST00000413593 CNTLNQ9NXG0 1405 aa15.54■□□□□ 0.08
TMEM248-202ENST00000413593 FAM50AQ14320 339 aaKnown RBP15.54■□□□□ 0.08
TMEM248-202ENST00000413593 GGT6Q6P531 493 aa15.54■□□□□ 0.08
TMEM248-202ENST00000413593 KIF3BO15066 747 aa15.53■□□□□ 0.08
TMEM248-202ENST00000413593 CEBPAP49715 358 aaPredicted RBP15.53■□□□□ 0.08
TMEM248-202ENST00000413593 KIF15Q9NS87 1388 aa15.5■□□□□ 0.07
TMEM248-202ENST00000413593 MSH5O43196 834 aa15.5■□□□□ 0.07
TMEM248-202ENST00000413593 CROCC2H7BZ55 1655 aa15.5■□□□□ 0.07
TMEM248-202ENST00000413593 RRP7BPQ9NSQ0 103 aa15.49■□□□□ 0.07
TMEM248-202ENST00000413593 CHIC2Q9UKJ5 165 aa15.49■□□□□ 0.07
TMEM248-202ENST00000413593 DUOX2Q9NRD8 1548 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms