RNA–Protein interactions for RNA: ENST00000413146.6

TNFRSF8-202, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF8, Length 2,363 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-202ENST00000413146 L3MBTL2Q969R5 705 aa26.41■■□□□ 1.82
TNFRSF8-202ENST00000413146 EIF4G3O43432 1585 aaKnown RBP26.4■■□□□ 1.82
TNFRSF8-202ENST00000413146 FOXD1Q16676 465 aa26.37■■□□□ 1.81
TNFRSF8-202ENST00000413146 RPRD2Q5VT52 1461 aaKnown RBP26.37■■□□□ 1.81
TNFRSF8-202ENST00000413146 KIAA0586Q9BVV6 1533 aa26.36■■□□□ 1.81
TNFRSF8-202ENST00000413146 RAPGEF6Q8TEU7 1601 aa26.36■■□□□ 1.81
TNFRSF8-202ENST00000413146 DISP1Q96F81 1524 aa26.35■■□□□ 1.81
TNFRSF8-202ENST00000413146 ABCC5O15440 1437 aa26.35■■□□□ 1.81
TNFRSF8-202ENST00000413146 ANKRD30BQ9BXX2 1392 aa26.34■■□□□ 1.81
TNFRSF8-202ENST00000413146 NUP153P49790 1475 aaKnown RBP26.34■■□□□ 1.81
TNFRSF8-202ENST00000413146 NCOA1Q15788 1441 aa26.34■■□□□ 1.81
TNFRSF8-202ENST00000413146 ANP32EQ9BTT0 268 aa26.32■■□□□ 1.8
TNFRSF8-202ENST00000413146 TEX14Q8IWB6 1497 aa26.32■■□□□ 1.8
TNFRSF8-202ENST00000413146 CCDC7Q96M83 1385 aa26.31■■□□□ 1.8
TNFRSF8-202ENST00000413146 CDK11AQ9UQ88 783 aaPredicted RBP26.29■■□□□ 1.8
TNFRSF8-202ENST00000413146 POLR1AO95602 1720 aaPredicted RBP26.28■■□□□ 1.8
TNFRSF8-202ENST00000413146 ZNF644Q9H582 1327 aaPredicted RBP26.27■■□□□ 1.8
TNFRSF8-202ENST00000413146 SLC4A1APQ9BWU0 796 aaKnown RBP26.26■■□□□ 1.79
TNFRSF8-202ENST00000413146 RBM19Q9Y4C8 960 aaKnown RBP26.26■■□□□ 1.79
TNFRSF8-202ENST00000413146 GRIN2AQ12879 1464 aa26.25■■□□□ 1.79
TNFRSF8-202ENST00000413146 NBPF8Q3BBV2 869 aa26.25■■□□□ 1.79
TNFRSF8-202ENST00000413146 C11orf95C9JLR9 678 aaPredicted RBP26.24■■□□□ 1.79
TNFRSF8-202ENST00000413146 ITSN2Q9NZM3 1697 aa26.24■■□□□ 1.79
TNFRSF8-202ENST00000413146 PRKRIP1Q9H875 184 aaPredicted RBP26.23■■□□□ 1.79
TNFRSF8-202ENST00000413146 ADGBQ8N7X0 1667 aa26.23■■□□□ 1.79
TNFRSF8-202ENST00000413146 CAMSAP2Q08AD1 1489 aa26.2■■□□□ 1.79
TNFRSF8-202ENST00000413146 MAGI1Q96QZ7 1491 aaPredicted RBP26.2■■□□□ 1.78
TNFRSF8-202ENST00000413146 TROQ12816 1431 aaPredicted RBP26.2■■□□□ 1.78
TNFRSF8-202ENST00000413146 CCDC184Q52MB2 194 aa26.19■■□□□ 1.78
TNFRSF8-202ENST00000413146 SPATA31E1Q6ZUB1 1445 aa26.18■■□□□ 1.78
TNFRSF8-202ENST00000413146 PZPP20742 1482 aa26.17■■□□□ 1.78
TNFRSF8-202ENST00000413146 PRG4Q92954 1404 aaPredicted RBP26.16■■□□□ 1.78
TNFRSF8-202ENST00000413146 IRX6P78412 446 aaPredicted RBP26.16■■□□□ 1.78
TNFRSF8-202ENST00000413146 MRS2Q9HD23 443 aa26.16■■□□□ 1.78
TNFRSF8-202ENST00000413146 KIF7Q2M1P5 1343 aa26.15■■□□□ 1.78
TNFRSF8-202ENST00000413146 CROCC2H7BZ55 1655 aa26.15■■□□□ 1.78
TNFRSF8-202ENST00000413146 CFDP1Q9UEE9 299 aaPredicted RBP26.14■■□□□ 1.78
TNFRSF8-202ENST00000413146 ADCY10Q96PN6 1610 aa26.14■■□□□ 1.78
TNFRSF8-202ENST00000413146 FAM9BQ8IZU0 186 aa26.13■■□□□ 1.77
TNFRSF8-202ENST00000413146 ERICH6BQ5W0A0 696 aa26.13■■□□□ 1.77
TNFRSF8-202ENST00000413146 GPATCH8Q9UKJ3 1502 aaKnown RBP26.1■■□□□ 1.77
TNFRSF8-202ENST00000413146 ADGRL2O95490 1459 aa26.1■■□□□ 1.77
TNFRSF8-202ENST00000413146 KIF14Q15058 1648 aa26.1■■□□□ 1.77
TNFRSF8-202ENST00000413146 SYNJ2O15056 1496 aa26.09■■□□□ 1.77
TNFRSF8-202ENST00000413146 PLB1Q6P1J6 1458 aa26.09■■□□□ 1.77
TNFRSF8-202ENST00000413146 ZBED9Q6R2W3 1325 aa26.09■■□□□ 1.77
TNFRSF8-202ENST00000413146 KIAA1107Q9UPP5 1409 aa26.09■■□□□ 1.77
TNFRSF8-202ENST00000413146 MBD5Q9P267 1494 aa26.08■■□□□ 1.77
TNFRSF8-202ENST00000413146 CEP170Q5SW79 1584 aa26.07■■□□□ 1.76
TNFRSF8-202ENST00000413146 ZNF777Q9ULD5 760 aaPredicted RBP26.05■■□□□ 1.76
TNFRSF8-202ENST00000413146 ANKRD30AQ9BXX3 1397 aa26.04■■□□□ 1.76
TNFRSF8-202ENST00000413146 PPP4R2Q9NY27 417 aa26.03■■□□□ 1.76
TNFRSF8-202ENST00000413146 CHMP7Q8WUX9 453 aaPredicted RBP26.02■■□□□ 1.76
TNFRSF8-202ENST00000413146 CARMIL2Q6F5E8 1435 aa26.01■■□□□ 1.75
TNFRSF8-202ENST00000413146 USP47Q96K76 1375 aa26■■□□□ 1.75
TNFRSF8-202ENST00000413146 PKD2Q13563 968 aa25.99■■□□□ 1.75
TNFRSF8-202ENST00000413146 BCORL1Q5H9F3 1711 aa25.98■■□□□ 1.75
TNFRSF8-202ENST00000413146 ANKRD50Q9ULJ7 1429 aa25.98■■□□□ 1.75
TNFRSF8-202ENST00000413146 ZNF326Q5BKZ1 582 aaKnown RBP25.97■■□□□ 1.75
TNFRSF8-202ENST00000413146 KDM5CP41229 1560 aa25.97■■□□□ 1.75
TNFRSF8-202ENST00000413146 CDC42BPAQ5VT25 1732 aa25.96■■□□□ 1.75
TNFRSF8-202ENST00000413146 DHX29Q7Z478 1369 aaKnown RBP25.95■■□□□ 1.74
TNFRSF8-202ENST00000413146 SHANK2Q9UPX8 1470 aa25.93■■□□□ 1.74
TNFRSF8-202ENST00000413146 ARID4BQ4LE39 1312 aaPredicted RBP25.92■■□□□ 1.74
TNFRSF8-202ENST00000413146 FANCIQ9NVI1 1328 aa25.92■■□□□ 1.74
TNFRSF8-202ENST00000413146 FBLN2P98095 1184 aa25.91■■□□□ 1.74
TNFRSF8-202ENST00000413146 POLR3GLQ9BT43 218 aa25.91■■□□□ 1.74
TNFRSF8-202ENST00000413146 NUP160Q12769 1436 aa25.91■■□□□ 1.74
TNFRSF8-202ENST00000413146 JPH4Q96JJ6 628 aa25.89■■□□□ 1.74
TNFRSF8-202ENST00000413146 C9orf84Q5VXU9 1444 aa25.89■■□□□ 1.74
TNFRSF8-202ENST00000413146 UHRF1BP1Q6BDS2 1440 aa25.89■■□□□ 1.74
TNFRSF8-202ENST00000413146 RALGAPBQ86X10 1494 aa25.89■■□□□ 1.73
TNFRSF8-202ENST00000413146 PLEKHD1A6NEE1 506 aa25.88■■□□□ 1.73
TNFRSF8-202ENST00000413146 ABCA8O94911 1581 aa25.88■■□□□ 1.73
TNFRSF8-202ENST00000413146 ARHGEF12Q9NZN5 1544 aa25.87■■□□□ 1.73
TNFRSF8-202ENST00000413146 ABCC10Q5T3U5 1492 aa25.87■■□□□ 1.73
TNFRSF8-202ENST00000413146 NUP155O75694 1391 aa25.87■■□□□ 1.73
TNFRSF8-202ENST00000413146 KDM5DQ9BY66 1539 aa25.85■■□□□ 1.73
TNFRSF8-202ENST00000413146 ROCK2O75116 1388 aaKnown RBP25.85■■□□□ 1.73
TNFRSF8-202ENST00000413146 SMG6Q86US8 1419 aaKnown RBP25.85■■□□□ 1.73
TNFRSF8-202ENST00000413146 MSH5O43196 834 aa25.84■■□□□ 1.73
TNFRSF8-202ENST00000413146 CHD1O14646 1710 aa25.84■■□□□ 1.73
TNFRSF8-202ENST00000413146 CNGB1Q14028 1251 aaPredicted RBP25.84■■□□□ 1.73
TNFRSF8-202ENST00000413146 B4GALNT3Q6L9W6 998 aa25.83■■□□□ 1.73
TNFRSF8-202ENST00000413146 ATP10BO94823 1461 aa25.82■■□□□ 1.72
TNFRSF8-202ENST00000413146 TSPY4P0CV99 314 aa25.8■■□□□ 1.72
TNFRSF8-202ENST00000413146 TSPY10P0CW01 314 aa25.8■■□□□ 1.72
TNFRSF8-202ENST00000413146 CARD11Q9BXL7 1154 aa25.8■■□□□ 1.72
TNFRSF8-202ENST00000413146 SLC24A1O60721 1099 aa25.77■■□□□ 1.72
TNFRSF8-202ENST00000413146 NUDCQ9Y266 331 aa25.77■■□□□ 1.72
TNFRSF8-202ENST00000413146 ARHGEF5Q12774 1597 aa25.77■■□□□ 1.72
TNFRSF8-202ENST00000413146 KIF15Q9NS87 1388 aa25.76■■□□□ 1.71
TNFRSF8-202ENST00000413146 PTPRGP23470 1445 aa25.74■■□□□ 1.71
TNFRSF8-202ENST00000413146 ERICH6Q7L0X2 663 aa25.74■■□□□ 1.71
TNFRSF8-202ENST00000413146 TMC1Q8TDI8 760 aa25.72■■□□□ 1.71
TNFRSF8-202ENST00000413146 KDM2AQ9Y2K7 1162 aa25.71■■□□□ 1.71
TNFRSF8-202ENST00000413146 PNISRQ8TF01 805 aaKnown RBP25.7■■□□□ 1.7
TNFRSF8-202ENST00000413146 HNRNPMP52272 730 aaKnown RBP eCLIP25.69■■□□□ 1.7
TNFRSF8-202ENST00000413146 DCAF11Q8TEB1 546 aa25.69■■□□□ 1.7
TNFRSF8-202ENST00000413146 E9PCH4 1651 aa25.68■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms