RNA–Protein interactions for RNA: ENST00000412894.5

FAM3A-206, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 5

Gene FAM3A, Length 832 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-206ENST00000412894 EFCAB2Q5VUJ9 269 aa24.8■■□□□ 1.56
FAM3A-206ENST00000412894 ADGRL1O94910 1474 aa24.8■■□□□ 1.56
FAM3A-206ENST00000412894 SUPT6HQ7KZ85 1726 aaKnown RBP24.8■■□□□ 1.56
FAM3A-206ENST00000412894 DENND4BO75064 1496 aaPredicted RBP24.79■■□□□ 1.56
FAM3A-206ENST00000412894 MAP3K1Q13233 1512 aa24.78■■□□□ 1.56
FAM3A-206ENST00000412894 RAPGEF3O95398 923 aa24.78■■□□□ 1.56
FAM3A-206ENST00000412894 ITSN2Q9NZM3 1697 aa24.75■■□□□ 1.55
FAM3A-206ENST00000412894 CCNB3Q8WWL7 1395 aa24.75■■□□□ 1.55
FAM3A-206ENST00000412894 LRRC9Q6ZRR7 1453 aa24.75■■□□□ 1.55
FAM3A-206ENST00000412894 GPATCH8Q9UKJ3 1502 aaKnown RBP24.75■■□□□ 1.55
FAM3A-206ENST00000412894 SCAPERQ9BY12 1400 aa24.74■■□□□ 1.55
FAM3A-206ENST00000412894 NCOA2Q15596 1464 aa24.71■■□□□ 1.55
FAM3A-206ENST00000412894 APLP2Q06481 763 aa24.71■■□□□ 1.55
FAM3A-206ENST00000412894 POGZQ7Z3K3 1410 aa24.7■■□□□ 1.55
FAM3A-206ENST00000412894 ABCC1P33527 1531 aa24.7■■□□□ 1.54
FAM3A-206ENST00000412894 SAMD9LQ8IVG5 1584 aa24.69■■□□□ 1.54
FAM3A-206ENST00000412894 ZMYM4Q5VZL5 1548 aa24.69■■□□□ 1.54
FAM3A-206ENST00000412894 KANK4Q5T7N3 995 aaPredicted RBP24.67■■□□□ 1.54
FAM3A-206ENST00000412894 ZNF777Q9ULD5 760 aaPredicted RBP24.66■■□□□ 1.54
FAM3A-206ENST00000412894 CFDP1Q9UEE9 299 aaPredicted RBP24.65■■□□□ 1.54
FAM3A-206ENST00000412894 ARHGEF40Q8TER5 1519 aa24.65■■□□□ 1.54
FAM3A-206ENST00000412894 ZNF518AQ6AHZ1 1483 aa24.64■■□□□ 1.53
FAM3A-206ENST00000412894 ARHGEF12Q9NZN5 1544 aa24.63■■□□□ 1.53
FAM3A-206ENST00000412894 SYCP2Q9BX26 1530 aa24.62■■□□□ 1.53
FAM3A-206ENST00000412894 ZFYVE16Q7Z3T8 1539 aa24.61■■□□□ 1.53
FAM3A-206ENST00000412894 KDM5CP41229 1560 aa24.61■■□□□ 1.53
FAM3A-206ENST00000412894 HECW2Q9P2P5 1572 aa24.59■■□□□ 1.53
FAM3A-206ENST00000412894 MAGI2Q86UL8 1455 aa24.58■■□□□ 1.53
FAM3A-206ENST00000412894 PLEKHH2Q8IVE3 1493 aa24.58■■□□□ 1.53
FAM3A-206ENST00000412894 TRAPPC8Q9Y2L5 1435 aa24.58■■□□□ 1.53
FAM3A-206ENST00000412894 AFAP1Q8N556 730 aa24.57■■□□□ 1.52
FAM3A-206ENST00000412894 YEATS2Q9ULM3 1422 aa24.57■■□□□ 1.52
FAM3A-206ENST00000412894 KIAA1107Q9UPP5 1409 aa24.54■■□□□ 1.52
FAM3A-206ENST00000412894 ZNF644Q9H582 1327 aaPredicted RBP24.54■■□□□ 1.52
FAM3A-206ENST00000412894 HNRNPMP52272 730 aaKnown RBP eCLIP24.53■■□□□ 1.52
FAM3A-206ENST00000412894 CAMSAP2Q08AD1 1489 aa24.52■■□□□ 1.52
FAM3A-206ENST00000412894 MYT1LQ9UL68 1186 aa24.52■■□□□ 1.52
FAM3A-206ENST00000412894 MYOM3Q5VTT5 1437 aa24.51■■□□□ 1.51
FAM3A-206ENST00000412894 KIDINS220Q9ULH0 1771 aa24.5■■□□□ 1.51
FAM3A-206ENST00000412894 ABCA6Q8N139 1617 aa24.5■■□□□ 1.51
FAM3A-206ENST00000412894 KDM4FA0A1W2PPD8 638 aa24.49■■□□□ 1.51
FAM3A-206ENST00000412894 MLH3Q9UHC1 1453 aa24.49■■□□□ 1.51
FAM3A-206ENST00000412894 SIGLEC1Q9BZZ2 1709 aa24.49■■□□□ 1.51
FAM3A-206ENST00000412894 DIP2CQ9Y2E4 1556 aa24.48■■□□□ 1.51
FAM3A-206ENST00000412894 ATP10AO60312 1499 aa24.46■■□□□ 1.51
FAM3A-206ENST00000412894 AEBP2Q6ZN18 517 aaPredicted RBP24.46■■□□□ 1.51
FAM3A-206ENST00000412894 BCORL1Q5H9F3 1711 aa24.46■■□□□ 1.51
FAM3A-206ENST00000412894 MBD5Q9P267 1494 aa24.45■■□□□ 1.51
FAM3A-206ENST00000412894 ARID4BQ4LE39 1312 aaPredicted RBP24.45■■□□□ 1.5
FAM3A-206ENST00000412894 INO80Q9ULG1 1556 aaPredicted RBP24.45■■□□□ 1.5
FAM3A-206ENST00000412894 C9orf84Q5VXU9 1444 aa24.44■■□□□ 1.5
FAM3A-206ENST00000412894 MIA2Q96PC5 1412 aa24.44■■□□□ 1.5
FAM3A-206ENST00000412894 ATP7AQ04656 1500 aa24.44■■□□□ 1.5
FAM3A-206ENST00000412894 SPAG9O60271 1321 aaKnown RBP24.43■■□□□ 1.5
FAM3A-206ENST00000412894 ARHGEF5Q12774 1597 aa24.42■■□□□ 1.5
FAM3A-206ENST00000412894 CCDC141Q6ZP82 1450 aa24.41■■□□□ 1.5
FAM3A-206ENST00000412894 PTPN23Q9H3S7 1636 aa24.41■■□□□ 1.5
FAM3A-206ENST00000412894 ADAMTSL3P82987 1691 aa24.4■■□□□ 1.5
FAM3A-206ENST00000412894 REREQ9P2R6 1566 aa24.39■■□□□ 1.5
FAM3A-206ENST00000412894 FGD6Q6ZV73 1430 aa24.37■■□□□ 1.49
FAM3A-206ENST00000412894 MADDQ8WXG6 1647 aa24.35■■□□□ 1.49
FAM3A-206ENST00000412894 ADGBQ8N7X0 1667 aa24.35■■□□□ 1.49
FAM3A-206ENST00000412894 RSPH4AQ5TD94 716 aa24.33■■□□□ 1.49
FAM3A-206ENST00000412894 PPARGC1BQ86YN6 1023 aaKnown RBP24.33■■□□□ 1.49
FAM3A-206ENST00000412894 FER1L4A9Z1Z3 1794 aa24.32■■□□□ 1.48
FAM3A-206ENST00000412894 CROCC2H7BZ55 1655 aa24.31■■□□□ 1.48
FAM3A-206ENST00000412894 RIMS1Q86UR5 1692 aaKnown RBP24.31■■□□□ 1.48
FAM3A-206ENST00000412894 RTEL1-TNFRSF6BF6WH68 1400 aa24.31■■□□□ 1.48
FAM3A-206ENST00000412894 TCOF1Q13428 1488 aaKnown RBP24.31■■□□□ 1.48
FAM3A-206ENST00000412894 MLECQ14165 292 aa24.3■■□□□ 1.48
FAM3A-206ENST00000412894 AGLP35573 1532 aa24.3■■□□□ 1.48
FAM3A-206ENST00000412894 MAST1Q9Y2H9 1570 aa24.29■■□□□ 1.48
FAM3A-206ENST00000412894 PLXNC1O60486 1568 aa24.28■■□□□ 1.48
FAM3A-206ENST00000412894 DNMT1P26358 1616 aaKnown RBP24.28■■□□□ 1.48
FAM3A-206ENST00000412894 A2MP01023 1474 aa24.27■■□□□ 1.48
FAM3A-206ENST00000412894 TSPY4P0CV99 314 aa24.27■■□□□ 1.48
FAM3A-206ENST00000412894 TSPY10P0CW01 314 aa24.27■■□□□ 1.48
FAM3A-206ENST00000412894 PTPRMP28827 1452 aa24.22■■□□□ 1.47
FAM3A-206ENST00000412894 ABCC5O15440 1437 aa24.21■■□□□ 1.47
FAM3A-206ENST00000412894 DAPK1P53355 1430 aa24.21■■□□□ 1.47
FAM3A-206ENST00000412894 FAM50AQ14320 339 aaKnown RBP24.21■■□□□ 1.47
FAM3A-206ENST00000412894 SHANK2Q9UPX8 1470 aa24.2■■□□□ 1.47
FAM3A-206ENST00000412894 DHX29Q7Z478 1369 aaKnown RBP24.17■■□□□ 1.46
FAM3A-206ENST00000412894 PLPPR3Q6T4P5 718 aa24.11■■□□□ 1.45
FAM3A-206ENST00000412894 ESF1Q9H501 851 aaKnown RBP24.1■■□□□ 1.45
FAM3A-206ENST00000412894 CLTCQ00610 1675 aaKnown RBP24.1■■□□□ 1.45
FAM3A-206ENST00000412894 EIF2AK4Q9P2K8 1649 aaKnown RBP24.1■■□□□ 1.45
FAM3A-206ENST00000412894 DUOX2Q9NRD8 1548 aa24.1■■□□□ 1.45
FAM3A-206ENST00000412894 C3P01024 1663 aa24.09■■□□□ 1.45
FAM3A-206ENST00000412894 GGT6Q6P531 493 aa24.09■■□□□ 1.45
FAM3A-206ENST00000412894 CHIC2Q9UKJ5 165 aa24.09■■□□□ 1.45
FAM3A-206ENST00000412894 MROH2AA6NES4 1674 aa24.08■■□□□ 1.45
FAM3A-206ENST00000412894 KIF15Q9NS87 1388 aa24.08■■□□□ 1.45
FAM3A-206ENST00000412894 KIF3BO15066 747 aa24.08■■□□□ 1.45
FAM3A-206ENST00000412894 RRP7BPQ9NSQ0 103 aa24.06■■□□□ 1.44
FAM3A-206ENST00000412894 CNTLNQ9NXG0 1405 aa24.06■■□□□ 1.44
FAM3A-206ENST00000412894 ANKRD30AQ9BXX3 1397 aa24.05■■□□□ 1.44
FAM3A-206ENST00000412894 RNF17Q9BXT8 1623 aaKnown RBP24.05■■□□□ 1.44
FAM3A-206ENST00000412894 ADGRL2O95490 1459 aa24.05■■□□□ 1.44
FAM3A-206ENST00000412894 RRBP1Q9P2E9 1410 aaKnown RBP24.03■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms