RNA–Protein interactions for RNA: ENST00000410080.5

PRPF40A-202, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRPF40A, Length 8,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-202ENST00000410080 STK26Q9P289 416 aa14.36□□□□□ -0.11
PRPF40A-202ENST00000410080 CHAF1AQ13111 956 aaPredicted RBP14.35□□□□□ -0.11
PRPF40A-202ENST00000410080 TAF7LQ5H9L4 462 aa14.34□□□□□ -0.11
PRPF40A-202ENST00000410080 CEP162Q5TB80 1403 aa14.34□□□□□ -0.11
PRPF40A-202ENST00000410080 CREBRFQ8IUR6 639 aa14.34□□□□□ -0.11
PRPF40A-202ENST00000410080 MCCP23508 829 aa14.34□□□□□ -0.11
PRPF40A-202ENST00000410080 PHF23Q9BUL5 403 aaPredicted RBP14.34□□□□□ -0.11
PRPF40A-202ENST00000410080 A0A0U1RQG5 324 aaPredicted RBP14.34□□□□□ -0.11
PRPF40A-202ENST00000410080 CNKSR2Q8WXI2 1034 aa14.33□□□□□ -0.12
PRPF40A-202ENST00000410080 MSH5O43196 834 aa14.33□□□□□ -0.12
PRPF40A-202ENST00000410080 L1TD1Q5T7N2 865 aaKnown RBP14.33□□□□□ -0.12
PRPF40A-202ENST00000410080 WWC1Q8IX03 1113 aa14.33□□□□□ -0.12
PRPF40A-202ENST00000410080 HDGFP51858 240 aaKnown RBP14.32□□□□□ -0.12
PRPF40A-202ENST00000410080 MYO15BQ96JP2 1530 aa14.32□□□□□ -0.12
PRPF40A-202ENST00000410080 RTN4Q9NQC3 1192 aaKnown RBP14.32□□□□□ -0.12
PRPF40A-202ENST00000410080 GORABQ5T7V8 394 aa14.32□□□□□ -0.12
PRPF40A-202ENST00000410080 KANK1Q14678 1352 aa14.3□□□□□ -0.12
PRPF40A-202ENST00000410080 HSP90B1P14625 803 aaKnown RBP14.3□□□□□ -0.12
PRPF40A-202ENST00000410080 KIAA1211Q6ZU35 1233 aa14.29□□□□□ -0.12
PRPF40A-202ENST00000410080 KLHL34Q8N239 644 aa14.29□□□□□ -0.12
PRPF40A-202ENST00000410080 CHMP4BQ9H444 224 aaKnown RBP14.29□□□□□ -0.12
PRPF40A-202ENST00000410080 FRAT2O75474 233 aaPredicted RBP14.28□□□□□ -0.12
PRPF40A-202ENST00000410080 SIN3AQ96ST3 1273 aa14.28□□□□□ -0.12
PRPF40A-202ENST00000410080 MEX3CQ5U5Q3 659 aaKnown RBP14.28□□□□□ -0.12
PRPF40A-202ENST00000410080 WRNQ14191 1432 aaPredicted RBP eCLIP14.28□□□□□ -0.12
PRPF40A-202ENST00000410080 RASSF8Q8NHQ8 419 aa14.27□□□□□ -0.12
PRPF40A-202ENST00000410080 HSCBQ8IWL3 235 aa14.27□□□□□ -0.13
PRPF40A-202ENST00000410080 KIF27Q86VH2 1401 aa14.27□□□□□ -0.13
PRPF40A-202ENST00000410080 SUPT16HQ9Y5B9 1047 aaKnown RBP14.27□□□□□ -0.13
PRPF40A-202ENST00000410080 GTF2E1P29083 439 aaPredicted RBP14.25□□□□□ -0.13
PRPF40A-202ENST00000410080 DCAF11Q8TEB1 546 aa14.24□□□□□ -0.13
PRPF40A-202ENST00000410080 MSNP26038 577 aaKnown RBP14.24□□□□□ -0.13
PRPF40A-202ENST00000410080 RAD21O60216 631 aa14.23□□□□□ -0.13
PRPF40A-202ENST00000410080 ARID3AQ99856 593 aa14.23□□□□□ -0.13
PRPF40A-202ENST00000410080 CCNB3Q8WWL7 1395 aa14.23□□□□□ -0.13
PRPF40A-202ENST00000410080 MARCH6O60337 910 aa14.22□□□□□ -0.13
PRPF40A-202ENST00000410080 TCEAL9Q9UHQ7 104 aa14.22□□□□□ -0.13
PRPF40A-202ENST00000410080 MS4A1P11836 297 aa14.21□□□□□ -0.13
PRPF40A-202ENST00000410080 GGT6Q6P531 493 aa14.21□□□□□ -0.14
PRPF40A-202ENST00000410080 CEP89Q96ST8 783 aa14.21□□□□□ -0.14
PRPF40A-202ENST00000410080 CWC22Q9HCG8 908 aaKnown RBP14.21□□□□□ -0.14
PRPF40A-202ENST00000410080 MORC1Q86VD1 984 aa14.2□□□□□ -0.14
PRPF40A-202ENST00000410080 DCAF8L1A6NGE4 600 aa14.18□□□□□ -0.14
PRPF40A-202ENST00000410080 B4GALNT3Q6L9W6 998 aa14.18□□□□□ -0.14
PRPF40A-202ENST00000410080 NACADO15069 1562 aa14.18□□□□□ -0.14
PRPF40A-202ENST00000410080 EVA1CP58658 441 aa14.18□□□□□ -0.14
PRPF40A-202ENST00000410080 FBXW7Q969H0 707 aa14.18□□□□□ -0.14
PRPF40A-202ENST00000410080 GPATCH3Q96I76 525 aa14.18□□□□□ -0.14
PRPF40A-202ENST00000410080 TRIM34Q9BYJ4 488 aa14.18□□□□□ -0.14
PRPF40A-202ENST00000410080 TRIM6-TRIM34B2RNG4 842 aa14.17□□□□□ -0.14
PRPF40A-202ENST00000410080 TOMM22Q9NS69 142 aa14.17□□□□□ -0.14
PRPF40A-202ENST00000410080 CTDP1Q9Y5B0 961 aaPredicted RBP14.17□□□□□ -0.14
PRPF40A-202ENST00000410080 CEP164Q9UPV0 1460 aa14.17□□□□□ -0.14
PRPF40A-202ENST00000410080 PES1O00541 588 aaKnown RBP14.17□□□□□ -0.14
PRPF40A-202ENST00000410080 FOXD1Q16676 465 aa14.16□□□□□ -0.14
PRPF40A-202ENST00000410080 HDGFL2Q7Z4V5 671 aaPredicted RBP14.15□□□□□ -0.14
PRPF40A-202ENST00000410080 LTV1Q96GA3 475 aaPredicted RBP14.15□□□□□ -0.14
PRPF40A-202ENST00000410080 TMF1P82094 1093 aa14.15□□□□□ -0.14
PRPF40A-202ENST00000410080 TPM4P67936 248 aa14.14□□□□□ -0.15
PRPF40A-202ENST00000410080 NUTM2FA1L443 756 aa14.13□□□□□ -0.15
PRPF40A-202ENST00000410080 NUTM2DQ5VT03 806 aaPredicted RBP14.13□□□□□ -0.15
PRPF40A-202ENST00000410080 SPAG9O60271 1321 aaKnown RBP14.13□□□□□ -0.15
PRPF40A-202ENST00000410080 CUX2O14529 1486 aa14.13□□□□□ -0.15
PRPF40A-202ENST00000410080 EEA1Q15075 1411 aa14.11□□□□□ -0.15
PRPF40A-202ENST00000410080 SAMD1Q6SPF0 538 aaPredicted RBP14.11□□□□□ -0.15
PRPF40A-202ENST00000410080 SLC4A10Q6U841 1118 aa14.11□□□□□ -0.15
PRPF40A-202ENST00000410080 ITPRIPQ8IWB1 547 aa14.1□□□□□ -0.15
PRPF40A-202ENST00000410080 NOL8Q76FK4 1167 aaKnown RBP14.09□□□□□ -0.15
PRPF40A-202ENST00000410080 GOLGA6L1Q8N7Z2 621 aa14.09□□□□□ -0.15
PRPF40A-202ENST00000410080 SYTL4Q96C24 671 aaPredicted RBP14.08□□□□□ -0.15
PRPF40A-202ENST00000410080 NGDNQ8NEJ9 315 aaKnown RBP14.08□□□□□ -0.16
PRPF40A-202ENST00000410080 PRDM2Q13029 1718 aa14.08□□□□□ -0.16
PRPF40A-202ENST00000410080 EID1Q9Y6B2 187 aa14.08□□□□□ -0.16
PRPF40A-202ENST00000410080 GZF1Q9H116 711 aaPredicted RBP14.07□□□□□ -0.16
PRPF40A-202ENST00000410080 TPD52L1Q16890 204 aaPredicted RBP14.07□□□□□ -0.16
PRPF40A-202ENST00000410080 ABCC8Q09428 1581 aa14.06□□□□□ -0.16
PRPF40A-202ENST00000410080 CCDC34Q96HJ3 373 aa14.06□□□□□ -0.16
PRPF40A-202ENST00000410080 HTATSF1O43719 755 aaKnown RBP14.06□□□□□ -0.16
PRPF40A-202ENST00000410080 CARMIL1Q5VZK9 1371 aa14.05□□□□□ -0.16
PRPF40A-202ENST00000410080 NGEFQ8N5V2 710 aa14.05□□□□□ -0.16
PRPF40A-202ENST00000410080 AMPHP49418 695 aa14.05□□□□□ -0.16
PRPF40A-202ENST00000410080 STK31Q9BXU1 1019 aa14.05□□□□□ -0.16
PRPF40A-202ENST00000410080 PATL2C9JE40 543 aaKnown RBP14.05□□□□□ -0.16
PRPF40A-202ENST00000410080 TNIKQ9UKE5 1360 aa14.04□□□□□ -0.16
PRPF40A-202ENST00000410080 NOL10Q9BSC4 688 aaKnown RBP14.04□□□□□ -0.16
PRPF40A-202ENST00000410080 IPO8O15397 1037 aaKnown RBP14.03□□□□□ -0.16
PRPF40A-202ENST00000410080 U2AF1L5P0DN76 240 aaPredicted RBP14.03□□□□□ -0.16
PRPF40A-202ENST00000410080 U2AF1Q01081 240 aaKnown RBP eCLIP14.03□□□□□ -0.16
PRPF40A-202ENST00000410080 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.03□□□□□ -0.16
PRPF40A-202ENST00000410080 CFAP44Q96MT7 982 aa14.03□□□□□ -0.16
PRPF40A-202ENST00000410080 NOP58Q9Y2X3 529 aaKnown RBP14.03□□□□□ -0.16
PRPF40A-202ENST00000410080 ARHGAP35Q9NRY4 1499 aa14.03□□□□□ -0.16
PRPF40A-202ENST00000410080 BAZ1AQ9NRL2 1556 aaPredicted RBP14.02□□□□□ -0.17
PRPF40A-202ENST00000410080 ROCK2O75116 1388 aaKnown RBP14.02□□□□□ -0.17
PRPF40A-202ENST00000410080 FHAD1B1AJZ9 1412 aa14.02□□□□□ -0.17
PRPF40A-202ENST00000410080 PKD2Q13563 968 aa14.01□□□□□ -0.17
PRPF40A-202ENST00000410080 CALD1Q05682 793 aaKnown RBP14.01□□□□□ -0.17
PRPF40A-202ENST00000410080 VPS37DQ86XT2 251 aa14.01□□□□□ -0.17
PRPF40A-202ENST00000410080 PPP1R1BQ9UD71 204 aaPredicted RBP14.01□□□□□ -0.17
PRPF40A-202ENST00000410080 CECR2Q9BXF3 1484 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms