RNA–Protein interactions for RNA: ENST00000409836.3

GYPC-203, Transcript of glycophorin C (Gerbich blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GYPC, Length 932 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-203ENST00000409836 ITSN2Q9NZM3 1697 aa22.29■■□□□ 1.16
GYPC-203ENST00000409836 ZMYM4Q5VZL5 1548 aa22.28■■□□□ 1.16
GYPC-203ENST00000409836 LRRC9Q6ZRR7 1453 aa22.28■■□□□ 1.16
GYPC-203ENST00000409836 AKNAQ7Z591 1439 aa22.27■■□□□ 1.16
GYPC-203ENST00000409836 ARHGAP5Q13017 1502 aa22.26■■□□□ 1.15
GYPC-203ENST00000409836 ABCC1P33527 1531 aa22.25■■□□□ 1.15
GYPC-203ENST00000409836 GPATCH8Q9UKJ3 1502 aaKnown RBP22.25■■□□□ 1.15
GYPC-203ENST00000409836 ADGRL1O94910 1474 aa22.23■■□□□ 1.15
GYPC-203ENST00000409836 KDM5CP41229 1560 aa22.21■■□□□ 1.15
GYPC-203ENST00000409836 POGZQ7Z3K3 1410 aa22.21■■□□□ 1.15
GYPC-203ENST00000409836 DENND4BO75064 1496 aaPredicted RBP22.21■■□□□ 1.15
GYPC-203ENST00000409836 NCOA2Q15596 1464 aa22.2■■□□□ 1.14
GYPC-203ENST00000409836 SAMD9LQ8IVG5 1584 aa22.2■■□□□ 1.14
GYPC-203ENST00000409836 ARHGEF40Q8TER5 1519 aa22.19■■□□□ 1.14
GYPC-203ENST00000409836 EFCAB2Q5VUJ9 269 aa22.17■■□□□ 1.14
GYPC-203ENST00000409836 ZNF518AQ6AHZ1 1483 aa22.15■■□□□ 1.14
GYPC-203ENST00000409836 MAGI2Q86UL8 1455 aa22.15■■□□□ 1.14
GYPC-203ENST00000409836 CCNB3Q8WWL7 1395 aa22.14■■□□□ 1.14
GYPC-203ENST00000409836 SCAPERQ9BY12 1400 aa22.14■■□□□ 1.13
GYPC-203ENST00000409836 PLEKHH2Q8IVE3 1493 aa22.13■■□□□ 1.13
GYPC-203ENST00000409836 KIAA1107Q9UPP5 1409 aa22.12■■□□□ 1.13
GYPC-203ENST00000409836 ARHGEF12Q9NZN5 1544 aa22.11■■□□□ 1.13
GYPC-203ENST00000409836 HECW2Q9P2P5 1572 aa22.1■■□□□ 1.13
GYPC-203ENST00000409836 SYCP2Q9BX26 1530 aa22.1■■□□□ 1.13
GYPC-203ENST00000409836 ZFYVE16Q7Z3T8 1539 aa22.07■■□□□ 1.12
GYPC-203ENST00000409836 RAPGEF3O95398 923 aa22.06■■□□□ 1.12
GYPC-203ENST00000409836 KANK4Q5T7N3 995 aaPredicted RBP22.06■■□□□ 1.12
GYPC-203ENST00000409836 MLH3Q9UHC1 1453 aa22.06■■□□□ 1.12
GYPC-203ENST00000409836 REREQ9P2R6 1566 aa22.05■■□□□ 1.12
GYPC-203ENST00000409836 MYOM3Q5VTT5 1437 aa22.05■■□□□ 1.12
GYPC-203ENST00000409836 INO80Q9ULG1 1556 aaPredicted RBP22.04■■□□□ 1.12
GYPC-203ENST00000409836 MIA2Q96PC5 1412 aa22.04■■□□□ 1.12
GYPC-203ENST00000409836 TRAPPC8Q9Y2L5 1435 aa22.03■■□□□ 1.12
GYPC-203ENST00000409836 ARHGEF5Q12774 1597 aa22.03■■□□□ 1.12
GYPC-203ENST00000409836 CAMSAP2Q08AD1 1489 aa22.03■■□□□ 1.12
GYPC-203ENST00000409836 MBD5Q9P267 1494 aa22.03■■□□□ 1.12
GYPC-203ENST00000409836 KIDINS220Q9ULH0 1771 aa22.02■■□□□ 1.12
GYPC-203ENST00000409836 DIP2CQ9Y2E4 1556 aa22.01■■□□□ 1.11
GYPC-203ENST00000409836 CFDP1Q9UEE9 299 aaPredicted RBP22.01■■□□□ 1.11
GYPC-203ENST00000409836 ABCA6Q8N139 1617 aa22■■□□□ 1.11
GYPC-203ENST00000409836 YEATS2Q9ULM3 1422 aa21.99■■□□□ 1.11
GYPC-203ENST00000409836 SIGLEC1Q9BZZ2 1709 aa21.99■■□□□ 1.11
GYPC-203ENST00000409836 APLP2Q06481 763 aa21.98■■□□□ 1.11
GYPC-203ENST00000409836 ATP7AQ04656 1500 aa21.96■■□□□ 1.11
GYPC-203ENST00000409836 TCOF1Q13428 1488 aaKnown RBP21.95■■□□□ 1.1
GYPC-203ENST00000409836 CCDC141Q6ZP82 1450 aa21.95■■□□□ 1.1
GYPC-203ENST00000409836 C9orf84Q5VXU9 1444 aa21.94■■□□□ 1.1
GYPC-203ENST00000409836 BCORL1Q5H9F3 1711 aa21.94■■□□□ 1.1
GYPC-203ENST00000409836 ATP10AO60312 1499 aa21.93■■□□□ 1.1
GYPC-203ENST00000409836 PTPN23Q9H3S7 1636 aa21.93■■□□□ 1.1
GYPC-203ENST00000409836 MAST1Q9Y2H9 1570 aa21.93■■□□□ 1.1
GYPC-203ENST00000409836 CROCC2H7BZ55 1655 aa21.92■■□□□ 1.1
GYPC-203ENST00000409836 ADAMTSL3P82987 1691 aa21.92■■□□□ 1.1
GYPC-203ENST00000409836 PLXNC1O60486 1568 aa21.92■■□□□ 1.1
GYPC-203ENST00000409836 FGD6Q6ZV73 1430 aa21.92■■□□□ 1.1
GYPC-203ENST00000409836 AGLP35573 1532 aa21.91■■□□□ 1.1
GYPC-203ENST00000409836 RTEL1-TNFRSF6BF6WH68 1400 aa21.91■■□□□ 1.1
GYPC-203ENST00000409836 AFAP1Q8N556 730 aa21.9■■□□□ 1.1
GYPC-203ENST00000409836 ADGBQ8N7X0 1667 aa21.9■■□□□ 1.1
GYPC-203ENST00000409836 ZNF644Q9H582 1327 aaPredicted RBP21.89■■□□□ 1.1
GYPC-203ENST00000409836 ZNF777Q9ULD5 760 aaPredicted RBP21.87■■□□□ 1.09
GYPC-203ENST00000409836 SHANK2Q9UPX8 1470 aa21.87■■□□□ 1.09
GYPC-203ENST00000409836 DNMT1P26358 1616 aaKnown RBP21.87■■□□□ 1.09
GYPC-203ENST00000409836 RSPH4AQ5TD94 716 aa21.85■■□□□ 1.09
GYPC-203ENST00000409836 HNRNPMP52272 730 aaKnown RBP eCLIP21.84■■□□□ 1.091e-8■■■■■ 30.5
GYPC-203ENST00000409836 KDM4FA0A1W2PPD8 638 aa21.83■■□□□ 1.09
GYPC-203ENST00000409836 SPAG9O60271 1321 aaKnown RBP21.82■■□□□ 1.08
GYPC-203ENST00000409836 MADDQ8WXG6 1647 aa21.8■■□□□ 1.08
GYPC-203ENST00000409836 FER1L4A9Z1Z3 1794 aa21.78■■□□□ 1.08
GYPC-203ENST00000409836 A2MP01023 1474 aa21.77■■□□□ 1.08
GYPC-203ENST00000409836 DAPK1P53355 1430 aa21.76■■□□□ 1.07
GYPC-203ENST00000409836 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.75■■□□□ 1.072e-7■■□□□ 13.2
GYPC-203ENST00000409836 ABCC5O15440 1437 aa21.75■■□□□ 1.07
GYPC-203ENST00000409836 EIF2AK4Q9P2K8 1649 aaKnown RBP21.74■■□□□ 1.07
GYPC-203ENST00000409836 FAM135AQ9P2D6 1515 aa21.73■■□□□ 1.07
GYPC-203ENST00000409836 ADGRL2O95490 1459 aa21.72■■□□□ 1.07
GYPC-203ENST00000409836 RIMS1Q86UR5 1692 aaKnown RBP21.71■■□□□ 1.07
GYPC-203ENST00000409836 RRBP1Q9P2E9 1410 aaKnown RBP21.71■■□□□ 1.07
GYPC-203ENST00000409836 RNF17Q9BXT8 1623 aaKnown RBP21.7■■□□□ 1.06
GYPC-203ENST00000409836 MROH2AA6NES4 1674 aa21.69■■□□□ 1.06
GYPC-203ENST00000409836 DHX29Q7Z478 1369 aaKnown RBP21.69■■□□□ 1.06
GYPC-203ENST00000409836 PTPRMP28827 1452 aa21.69■■□□□ 1.06
GYPC-203ENST00000409836 DUOX2Q9NRD8 1548 aa21.67■■□□□ 1.06
GYPC-203ENST00000409836 ARID4BQ4LE39 1312 aaPredicted RBP21.65■■□□□ 1.06
GYPC-203ENST00000409836 TSPY4P0CV99 314 aa21.65■■□□□ 1.06
GYPC-203ENST00000409836 TSPY10P0CW01 314 aa21.65■■□□□ 1.06
GYPC-203ENST00000409836 ERBINQ96RT1 1412 aa21.63■■□□□ 1.05
GYPC-203ENST00000409836 CNTLNQ9NXG0 1405 aa21.63■■□□□ 1.05
GYPC-203ENST00000409836 DEPDC5O75140 1603 aa21.62■■□□□ 1.05
GYPC-203ENST00000409836 MROH1Q8NDA8 1641 aa21.62■■□□□ 1.05
GYPC-203ENST00000409836 MYT1LQ9UL68 1186 aa21.62■■□□□ 1.05
GYPC-203ENST00000409836 NCOA1Q15788 1441 aa21.61■■□□□ 1.05
GYPC-203ENST00000409836 ZC3H13Q5T200 1668 aaKnown RBP21.6■■□□□ 1.05
GYPC-203ENST00000409836 KIF15Q9NS87 1388 aa21.6■■□□□ 1.05
GYPC-203ENST00000409836 PRDM15P57071 1507 aaPredicted RBP21.6■■□□□ 1.05
GYPC-203ENST00000409836 C3P01024 1663 aa21.59■■□□□ 1.05
GYPC-203ENST00000409836 KDM5DQ9BY66 1539 aa21.58■■□□□ 1.04
GYPC-203ENST00000409836 ROCK1Q13464 1354 aa21.58■■□□□ 1.04
GYPC-203ENST00000409836 PTPRKQ15262 1439 aa21.57■■□□□ 1.04
GYPC-203ENST00000409836 ANKRD30AQ9BXX3 1397 aa21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 111.9 ms