RNA–Protein interactions for RNA: ENST00000409687.4

SAPCD2-201, Transcript of suppressor APC domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAPCD2, Length 3,848 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAPCD2-201ENST00000409687 KNSTRNQ9Y448 316 aa19.87■□□□□ 0.77
SAPCD2-201ENST00000409687 NCOA2Q15596 1464 aa19.87■□□□□ 0.77
SAPCD2-201ENST00000409687 NUDCQ9Y266 331 aa19.87■□□□□ 0.77
SAPCD2-201ENST00000409687 AQRO60306 1485 aaKnown RBP eCLIP19.85■□□□□ 0.775e-6■■■□□ 18.5
SAPCD2-201ENST00000409687 MYOM3Q5VTT5 1437 aa19.85■□□□□ 0.77
SAPCD2-201ENST00000409687 RCAN3Q9UKA8 241 aa19.85■□□□□ 0.77
SAPCD2-201ENST00000409687 EXOC6Q8TAG9 804 aa19.84■□□□□ 0.77
SAPCD2-201ENST00000409687 CCDC7Q96M83 1385 aa19.83■□□□□ 0.77
SAPCD2-201ENST00000409687 MSH5O43196 834 aa19.83■□□□□ 0.77
SAPCD2-201ENST00000409687 FRAT1Q92837 279 aaPredicted RBP19.82■□□□□ 0.76
SAPCD2-201ENST00000409687 ROCK2O75116 1388 aaKnown RBP19.81■□□□□ 0.76
SAPCD2-201ENST00000409687 CASKIN1Q8WXD9 1431 aa19.81■□□□□ 0.76
SAPCD2-201ENST00000409687 GAPVD1Q14C86 1478 aa19.81■□□□□ 0.76
SAPCD2-201ENST00000409687 USP47Q96K76 1375 aa19.8■□□□□ 0.76
SAPCD2-201ENST00000409687 SLC4A3P48751 1232 aa19.8■□□□□ 0.76
SAPCD2-201ENST00000409687 MAPKBP1O60336 1514 aa19.79■□□□□ 0.76
SAPCD2-201ENST00000409687 ZBED9Q6R2W3 1325 aa19.79■□□□□ 0.76
SAPCD2-201ENST00000409687 CCDC146Q8IYE0 955 aa19.79■□□□□ 0.76
SAPCD2-201ENST00000409687 PLPPR3Q6T4P5 718 aa19.77■□□□□ 0.76
SAPCD2-201ENST00000409687 AKNAQ7Z591 1439 aa19.77■□□□□ 0.76
SAPCD2-201ENST00000409687 SLC24A1O60721 1099 aa19.76■□□□□ 0.75
SAPCD2-201ENST00000409687 SAFB2Q14151 953 aaKnown RBP eCLIP19.76■□□□□ 0.75
SAPCD2-201ENST00000409687 JPH4Q96JJ6 628 aa19.76■□□□□ 0.75
SAPCD2-201ENST00000409687 PAK3O75914 559 aaPredicted RBP19.75■□□□□ 0.75
SAPCD2-201ENST00000409687 POLA1P09884 1462 aaPredicted RBP19.75■□□□□ 0.75
SAPCD2-201ENST00000409687 SKAP1Q86WV1 359 aa19.75■□□□□ 0.75
SAPCD2-201ENST00000409687 PCF11O94913 1555 aaKnown RBP19.75■□□□□ 0.75
SAPCD2-201ENST00000409687 NAIPQ13075 1403 aa19.75■□□□□ 0.75
SAPCD2-201ENST00000409687 CDCA7LQ96GN5 454 aa19.74■□□□□ 0.75
SAPCD2-201ENST00000409687 ERCC6Q03468 1493 aa19.74■□□□□ 0.75
SAPCD2-201ENST00000409687 PTPRKQ15262 1439 aa19.74■□□□□ 0.75
SAPCD2-201ENST00000409687 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.73■□□□□ 0.75
SAPCD2-201ENST00000409687 CNTLNQ9NXG0 1405 aa19.71■□□□□ 0.75
SAPCD2-201ENST00000409687 TMF1P82094 1093 aa19.71■□□□□ 0.75
SAPCD2-201ENST00000409687 PANK3Q9H999 370 aa19.71■□□□□ 0.75
SAPCD2-201ENST00000409687 ANKRD30AQ9BXX3 1397 aa19.7■□□□□ 0.74
SAPCD2-201ENST00000409687 HFM1A2PYH4 1435 aa19.7■□□□□ 0.74
SAPCD2-201ENST00000409687 PPM1GO15355 546 aaPredicted RBP19.69■□□□□ 0.74
SAPCD2-201ENST00000409687 KTN1Q86UP2 1357 aaKnown RBP19.69■□□□□ 0.74
SAPCD2-201ENST00000409687 SPRYD3Q8NCJ5 442 aa19.69■□□□□ 0.74
SAPCD2-201ENST00000409687 FYCO1Q9BQS8 1478 aa19.68■□□□□ 0.74
SAPCD2-201ENST00000409687 IPO9Q96P70 1041 aaKnown RBP19.68■□□□□ 0.74
SAPCD2-201ENST00000409687 NUTM2DQ5VT03 806 aaPredicted RBP19.67■□□□□ 0.74
SAPCD2-201ENST00000409687 NBPF1Q3BBV0 1214 aa19.67■□□□□ 0.74
SAPCD2-201ENST00000409687 NLRP13Q86W25 1043 aa19.66■□□□□ 0.74
SAPCD2-201ENST00000409687 TOPBP1Q92547 1522 aa19.66■□□□□ 0.74
SAPCD2-201ENST00000409687 ERICH6BQ5W0A0 696 aa19.65■□□□□ 0.74
SAPCD2-201ENST00000409687 PEG3Q9GZU2 1588 aa19.64■□□□□ 0.73
SAPCD2-201ENST00000409687 FANCIQ9NVI1 1328 aa19.64■□□□□ 0.73
SAPCD2-201ENST00000409687 CDK13Q14004 1512 aaKnown RBP19.64■□□□□ 0.73
SAPCD2-201ENST00000409687 CRBNQ96SW2 442 aa19.63■□□□□ 0.73
SAPCD2-201ENST00000409687 RRP1P56182 461 aaKnown RBP19.63■□□□□ 0.73
SAPCD2-201ENST00000409687 STAG3Q9UJ98 1225 aa19.62■□□□□ 0.73
SAPCD2-201ENST00000409687 RALBP1Q15311 655 aa19.62■□□□□ 0.73
SAPCD2-201ENST00000409687 RRP7AQ9Y3A4 280 aaKnown RBP19.62■□□□□ 0.73
SAPCD2-201ENST00000409687 CLUAP1Q96AJ1 413 aa19.61■□□□□ 0.73
SAPCD2-201ENST00000409687 PDE4AP27815 886 aa19.6■□□□□ 0.73
SAPCD2-201ENST00000409687 UPF2Q9HAU5 1272 aaKnown RBP19.6■□□□□ 0.73
SAPCD2-201ENST00000409687 MYBBP1AQ9BQG0 1328 aaKnown RBP19.6■□□□□ 0.73
SAPCD2-201ENST00000409687 BCL2L13Q9BXK5 485 aa19.6■□□□□ 0.73
SAPCD2-201ENST00000409687 PRG4Q92954 1404 aaPredicted RBP19.59■□□□□ 0.73
SAPCD2-201ENST00000409687 HSP90AA1P07900 732 aaKnown RBP19.59■□□□□ 0.73
SAPCD2-201ENST00000409687 PLEKHG5O94827 1062 aa19.58■□□□□ 0.72
SAPCD2-201ENST00000409687 HMGXB3Q12766 1538 aa19.58■□□□□ 0.72
SAPCD2-201ENST00000409687 U2SURPO15042 1029 aaKnown RBP19.57■□□□□ 0.72
SAPCD2-201ENST00000409687 SLKQ9H2G2 1235 aaPredicted RBP19.57■□□□□ 0.72
SAPCD2-201ENST00000409687 GGT6Q6P531 493 aa19.56■□□□□ 0.72
SAPCD2-201ENST00000409687 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.56■□□□□ 0.72
SAPCD2-201ENST00000409687 KIF15Q9NS87 1388 aa19.55■□□□□ 0.72
SAPCD2-201ENST00000409687 BIVM-ERCC5R4GMW8 1640 aa19.55■□□□□ 0.72
SAPCD2-201ENST00000409687 PRDM2Q13029 1718 aa19.55■□□□□ 0.72
SAPCD2-201ENST00000409687 PNISRQ8TF01 805 aaKnown RBP19.55■□□□□ 0.72
SAPCD2-201ENST00000409687 CC2D2AQ9P2K1 1620 aa19.54■□□□□ 0.72
SAPCD2-201ENST00000409687 STK26Q9P289 416 aa19.54■□□□□ 0.72
SAPCD2-201ENST00000409687 DDRGK1Q96HY6 314 aa19.53■□□□□ 0.72
SAPCD2-201ENST00000409687 CARMIL2Q6F5E8 1435 aa19.52■□□□□ 0.72
SAPCD2-201ENST00000409687 TCERG1O14776 1098 aaKnown RBP19.52■□□□□ 0.72
SAPCD2-201ENST00000409687 KIF3BO15066 747 aa19.52■□□□□ 0.72
SAPCD2-201ENST00000409687 NPM1P06748 294 aaKnown RBP eCLIP19.52■□□□□ 0.71
SAPCD2-201ENST00000409687 ANKRD50Q9ULJ7 1429 aa19.51■□□□□ 0.71
SAPCD2-201ENST00000409687 APAF1O14727 1248 aa19.51■□□□□ 0.71
SAPCD2-201ENST00000409687 ADAMTS8Q9UP79 889 aa19.49■□□□□ 0.71
SAPCD2-201ENST00000409687 CCDC144AA2RUR9 1427 aa19.49■□□□□ 0.71
SAPCD2-201ENST00000409687 CDCA8Q53HL2 280 aa19.49■□□□□ 0.71
SAPCD2-201ENST00000409687 FTSJ3Q8IY81 847 aaKnown RBP19.49■□□□□ 0.71
SAPCD2-201ENST00000409687 GOLGA2Q08379 1002 aa19.48■□□□□ 0.71
SAPCD2-201ENST00000409687 MORC1Q86VD1 984 aa19.48■□□□□ 0.71
SAPCD2-201ENST00000409687 TRAK1Q9UPV9 953 aa19.48■□□□□ 0.71
SAPCD2-201ENST00000409687 ANKRD30BQ9BXX2 1392 aa19.44■□□□□ 0.7
SAPCD2-201ENST00000409687 COG6Q9Y2V7 657 aa19.43■□□□□ 0.7
SAPCD2-201ENST00000409687 EFCAB5A4FU69 1503 aa19.43■□□□□ 0.7
SAPCD2-201ENST00000409687 ABCA10Q8WWZ4 1543 aa19.43■□□□□ 0.7
SAPCD2-201ENST00000409687 GZF1Q9H116 711 aaPredicted RBP19.43■□□□□ 0.7
SAPCD2-201ENST00000409687 EPRSP07814 1512 aaKnown RBP19.42■□□□□ 0.7
SAPCD2-201ENST00000409687 U2AF1L5P0DN76 240 aaPredicted RBP19.42■□□□□ 0.7
SAPCD2-201ENST00000409687 U2AF1Q01081 240 aaKnown RBP eCLIP19.42■□□□□ 0.7
SAPCD2-201ENST00000409687 DAPK1P53355 1430 aa19.42■□□□□ 0.7
SAPCD2-201ENST00000409687 SOX12O15370 315 aa19.42■□□□□ 0.7
SAPCD2-201ENST00000409687 TPRNQ4KMQ1 711 aa19.4■□□□□ 0.7
SAPCD2-201ENST00000409687 PTPN23Q9H3S7 1636 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms