RNA–Protein interactions for RNA: ENST00000409096.5

CUL3-203, Transcript of cullin 3, humanhuman

TSL 1 (best) BASIC

Gene CUL3, Length 2,701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-203ENST00000409096 CAMK2BQ13554 666 aa6.06□□□□□ -1.44
CUL3-203ENST00000409096 EMILIN3Q9NT22 766 aa6.06□□□□□ -1.44
CUL3-203ENST00000409096 POTEHQ6S545 545 aa6.05□□□□□ -1.44
CUL3-203ENST00000409096 OCEL1Q9H607 264 aa6.05□□□□□ -1.44
CUL3-203ENST00000409096 TESPA1A2RU30 521 aaPredicted RBP6.05□□□□□ -1.44
CUL3-203ENST00000409096 TMEM92Q6UXU6 159 aa6.04□□□□□ -1.44
CUL3-203ENST00000409096 BOLA1Q9Y3E2 137 aa6.04□□□□□ -1.44
CUL3-203ENST00000409096 POTEFA5A3E0 1075 aa6.04□□□□□ -1.44
CUL3-203ENST00000409096 C2orf72A6NCS6 295 aa6.04□□□□□ -1.44
CUL3-203ENST00000409096 DPYSL4O14531 572 aa6.03□□□□□ -1.44
CUL3-203ENST00000409096 MLLT3P42568 568 aaPredicted RBP6.03□□□□□ -1.44
CUL3-203ENST00000409096 TMEM121BQ9BXQ6 578 aaPredicted RBP6.03□□□□□ -1.44
CUL3-203ENST00000409096 CLCN6P51797 869 aa6.03□□□□□ -1.44
CUL3-203ENST00000409096 POTEIP0CG38 1075 aa6.02□□□□□ -1.45
CUL3-203ENST00000409096 IER5LQ5T953 404 aa6.02□□□□□ -1.45
CUL3-203ENST00000409096 PLCG2P16885 1265 aa6.02□□□□□ -1.45
CUL3-203ENST00000409096 DCBLD2Q96PD2 775 aa6.02□□□□□ -1.45
CUL3-203ENST00000409096 KIF3CO14782 793 aa6.01□□□□□ -1.45
CUL3-203ENST00000409096 FOXK1P85037 733 aa6.01□□□□□ -1.45
CUL3-203ENST00000409096 TMC2Q8TDI7 906 aa6.01□□□□□ -1.45
CUL3-203ENST00000409096 ARIH1Q9Y4X5 557 aaPredicted RBP6.01□□□□□ -1.45
CUL3-203ENST00000409096 PLPP6Q8IY26 295 aa6□□□□□ -1.45
CUL3-203ENST00000409096 ZC3H15Q8WU90 426 aaKnown RBP6□□□□□ -1.45
CUL3-203ENST00000409096 SEC24BO95487 1268 aa5.99□□□□□ -1.45
CUL3-203ENST00000409096 RBM26Q5T8P6 1007 aaKnown RBP5.99□□□□□ -1.45
CUL3-203ENST00000409096 UPF1Q92900 1129 aaKnown RBP eCLIP5.97□□□□□ -1.45
CUL3-203ENST00000409096 METRNQ9UJH8 293 aa5.97□□□□□ -1.45
CUL3-203ENST00000409096 G3V3G9 751 aa5.97□□□□□ -1.45
CUL3-203ENST00000409096 TULP1O00294 542 aaPredicted RBP5.96□□□□□ -1.46
CUL3-203ENST00000409096 PDIA6Q15084 440 aa5.96□□□□□ -1.46
CUL3-203ENST00000409096 SLC24A3Q9HC58 644 aa5.96□□□□□ -1.46
CUL3-203ENST00000409096 SLC39A7Q92504 469 aa5.94□□□□□ -1.46
CUL3-203ENST00000409096 L3MBTL3Q96JM7 780 aaPredicted RBP5.94□□□□□ -1.46
CUL3-203ENST00000409096 C7P10643 843 aa5.93□□□□□ -1.46
CUL3-203ENST00000409096 SP7Q8TDD2 431 aaPredicted RBP5.93□□□□□ -1.46
CUL3-203ENST00000409096 ZMYND10O75800 440 aa5.92□□□□□ -1.46
CUL3-203ENST00000409096 BRPF1P55201 1214 aaPredicted RBP5.92□□□□□ -1.46
CUL3-203ENST00000409096 GRXCR2A6NFK2 248 aa5.91□□□□□ -1.46
CUL3-203ENST00000409096 SMYD5Q6GMV2 418 aa5.91□□□□□ -1.46
CUL3-203ENST00000409096 MAP3K9P80192 1104 aa5.91□□□□□ -1.46
CUL3-203ENST00000409096 OXER1Q8TDS5 423 aa5.91□□□□□ -1.46
CUL3-203ENST00000409096 GPIHBP1Q8IV16 184 aa5.9□□□□□ -1.46
CUL3-203ENST00000409096 DDX12PQ92771 950 aa5.9□□□□□ -1.46
CUL3-203ENST00000409096 C3orf67Q6ZVT6 689 aa5.9□□□□□ -1.46
CUL3-203ENST00000409096 SPDYE16A6NNV3 312 aaPredicted RBP5.9□□□□□ -1.47
CUL3-203ENST00000409096 PRIM1P49642 420 aaKnown RBP5.89□□□□□ -1.47
CUL3-203ENST00000409096 GPR37O15354 613 aa5.89□□□□□ -1.47
CUL3-203ENST00000409096 BARGINQ6ZT62 677 aa5.88□□□□□ -1.47
CUL3-203ENST00000409096 POTEJP0CG39 1038 aa5.88□□□□□ -1.47
CUL3-203ENST00000409096 OSBPP22059 807 aa5.87□□□□□ -1.47
CUL3-203ENST00000409096 NEUROD2Q15784 382 aa5.87□□□□□ -1.47
CUL3-203ENST00000409096 POTEB2H3BUK9 544 aa5.86□□□□□ -1.47
CUL3-203ENST00000409096 EVI5O60447 810 aa5.86□□□□□ -1.47
CUL3-203ENST00000409096 GPBP1L1Q9HC44 474 aaPredicted RBP5.85□□□□□ -1.47
CUL3-203ENST00000409096 NUTM2FA1L443 756 aa5.85□□□□□ -1.47
CUL3-203ENST00000409096 FECHP22830 423 aa5.84□□□□□ -1.47
CUL3-203ENST00000409096 PTCD2Q8WV60 388 aaKnown RBP5.84□□□□□ -1.47
CUL3-203ENST00000409096 KRI1Q8N9T8 703 aaKnown RBP5.83□□□□□ -1.48
CUL3-203ENST00000409096 EIF2AK3Q9NZJ5 1116 aaKnown RBP5.83□□□□□ -1.48
CUL3-203ENST00000409096 TBC1D12O60347 775 aa5.83□□□□□ -1.48
CUL3-203ENST00000409096 PTGER2P43116 358 aa5.83□□□□□ -1.48
CUL3-203ENST00000409096 TMEM132AQ24JP5 1023 aa5.82□□□□□ -1.48
CUL3-203ENST00000409096 CDHR5Q9HBB8 845 aa5.82□□□□□ -1.48
CUL3-203ENST00000409096 SLC34A2O95436 690 aa5.81□□□□□ -1.48
CUL3-203ENST00000409096 KHSRPQ92945 711 aaKnown RBP eCLIP5.81□□□□□ -1.482e-6■■■□□ 16.7
CUL3-203ENST00000409096 TRIM66O15016 1216 aa5.8□□□□□ -1.48
CUL3-203ENST00000409096 AK7Q96M32 723 aa5.8□□□□□ -1.48
CUL3-203ENST00000409096 PCDHGA4Q9Y5G9 962 aa5.8□□□□□ -1.48
CUL3-203ENST00000409096 ANO8Q9HCE9 1232 aaPredicted RBP5.8□□□□□ -1.48
CUL3-203ENST00000409096 TIMELESSQ9UNS1 1208 aa5.8□□□□□ -1.48
CUL3-203ENST00000409096 GTF3C3Q9Y5Q9 886 aa5.8□□□□□ -1.48
CUL3-203ENST00000409096 TSR1Q2NL82 804 aaKnown RBP5.79□□□□□ -1.48
CUL3-203ENST00000409096 CCDC102AQ96A19 550 aa5.79□□□□□ -1.48
CUL3-203ENST00000409096 RBM33Q96EV2 1170 aaKnown RBP5.79□□□□□ -1.48
CUL3-203ENST00000409096 PCDHGA10Q9Y5H3 936 aa5.79□□□□□ -1.48
CUL3-203ENST00000409096 KDM4FA0A1W2PPD8 638 aa5.78□□□□□ -1.48
CUL3-203ENST00000409096 PTGDRQ13258 359 aa5.78□□□□□ -1.48
CUL3-203ENST00000409096 GNPATO15228 680 aa5.78□□□□□ -1.48
CUL3-203ENST00000409096 PDE4DQ08499 809 aa5.78□□□□□ -1.48
CUL3-203ENST00000409096 HOXB3P14651 431 aaPredicted RBP5.77□□□□□ -1.49
CUL3-203ENST00000409096 NPDC1Q9NQX5 325 aaPredicted RBP5.77□□□□□ -1.49
CUL3-203ENST00000409096 NUDT7P0C024 238 aa5.77□□□□□ -1.49
CUL3-203ENST00000409096 KDM4CQ9H3R0 1056 aa5.77□□□□□ -1.49
CUL3-203ENST00000409096 MAP3K7O43318 606 aa5.76□□□□□ -1.49
CUL3-203ENST00000409096 EN1Q05925 392 aaPredicted RBP5.76□□□□□ -1.49
CUL3-203ENST00000409096 MAP2K5Q13163 448 aa5.76□□□□□ -1.49
CUL3-203ENST00000409096 HIC1Q14526 733 aa5.76□□□□□ -1.49
CUL3-203ENST00000409096 IRF6O14896 467 aa5.76□□□□□ -1.49
CUL3-203ENST00000409096 ARSIQ5FYB1 569 aa5.76□□□□□ -1.49
CUL3-203ENST00000409096 SLAIN1Q8ND83 568 aa5.76□□□□□ -1.49
CUL3-203ENST00000409096 FCHSD2O94868 740 aa5.76□□□□□ -1.49
CUL3-203ENST00000409096 IL27Q8NEV9 243 aa5.76□□□□□ -1.49
CUL3-203ENST00000409096 ZNF316A6NFI3 1004 aaPredicted RBP5.75□□□□□ -1.49
CUL3-203ENST00000409096 FAM161AQ3B820 660 aa5.75□□□□□ -1.49
CUL3-203ENST00000409096 PHF14O94880 888 aa5.75□□□□□ -1.49
CUL3-203ENST00000409096 MINK1Q8N4C8 1332 aaPredicted RBP5.74□□□□□ -1.49
CUL3-203ENST00000409096 PARP9Q8IXQ6 854 aa5.74□□□□□ -1.49
CUL3-203ENST00000409096 GPR153Q6NV75 609 aa5.73□□□□□ -1.49
CUL3-203ENST00000409096 FAM117AQ9C073 453 aa5.73□□□□□ -1.49
CUL3-203ENST00000409096 FOSBP53539 338 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms