RNA–Protein interactions for RNA: ENST00000408061.1

SNORD88C-201, Transcript of small nucleolar RNA, C/D box 88C, humanhuman

BASIC

Gene SNORD88C, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88C-201ENST00000408061 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.27■□□□□ 0.04
SNORD88C-201ENST00000408061 CAMSAP2Q08AD1 1489 aa15.27■□□□□ 0.04
SNORD88C-201ENST00000408061 WDR7Q9Y4E6 1490 aa15.27■□□□□ 0.04
SNORD88C-201ENST00000408061 DAPK1P53355 1430 aa15.27■□□□□ 0.04
SNORD88C-201ENST00000408061 RAB3GAP2Q9H2M9 1393 aa15.27■□□□□ 0.04
SNORD88C-201ENST00000408061 MYO5CQ9NQX4 1742 aa15.27■□□□□ 0.04
SNORD88C-201ENST00000408061 ARHGEF5Q12774 1597 aa15.25■□□□□ 0.03
SNORD88C-201ENST00000408061 CDC42BPBQ9Y5S2 1711 aa15.25■□□□□ 0.03
SNORD88C-201ENST00000408061 ABCC5O15440 1437 aa15.25■□□□□ 0.03
SNORD88C-201ENST00000408061 PLCH2O75038 1416 aa15.25■□□□□ 0.03
SNORD88C-201ENST00000408061 PTPRKQ15262 1439 aa15.25■□□□□ 0.03
SNORD88C-201ENST00000408061 NAIPQ13075 1403 aa15.24■□□□□ 0.03
SNORD88C-201ENST00000408061 KIAA1107Q9UPP5 1409 aa15.24■□□□□ 0.03
SNORD88C-201ENST00000408061 GCC2Q8IWJ2 1684 aa15.23■□□□□ 0.03
SNORD88C-201ENST00000408061 SHANK2Q9UPX8 1470 aa15.23■□□□□ 0.03
SNORD88C-201ENST00000408061 EFCAB2Q5VUJ9 269 aa15.23■□□□□ 0.03
SNORD88C-201ENST00000408061 DHX57Q6P158 1386 aaKnown RBP15.23■□□□□ 0.03
SNORD88C-201ENST00000408061 ADGRL2O95490 1459 aa15.21■□□□□ 0.03
SNORD88C-201ENST00000408061 TTC37Q6PGP7 1564 aa15.21■□□□□ 0.03
SNORD88C-201ENST00000408061 ASXL2Q76L83 1435 aa15.21■□□□□ 0.03
SNORD88C-201ENST00000408061 TSPY4P0CV99 314 aa15.21■□□□□ 0.03
SNORD88C-201ENST00000408061 TSPY10P0CW01 314 aa15.21■□□□□ 0.03
SNORD88C-201ENST00000408061 KCNH8Q96L42 1107 aa15.21■□□□□ 0.03
SNORD88C-201ENST00000408061 ABCA9Q8IUA7 1624 aa15.21■□□□□ 0.02
SNORD88C-201ENST00000408061 ZNF644Q9H582 1327 aaPredicted RBP15.2■□□□□ 0.02
SNORD88C-201ENST00000408061 CROCC2H7BZ55 1655 aa15.2■□□□□ 0.02
SNORD88C-201ENST00000408061 ADGBQ8N7X0 1667 aa15.2■□□□□ 0.02
SNORD88C-201ENST00000408061 ZNF777Q9ULD5 760 aaPredicted RBP15.2■□□□□ 0.02
SNORD88C-201ENST00000408061 RIMBP3CA6NJZ7 1639 aa15.2■□□□□ 0.02
SNORD88C-201ENST00000408061 RIMBP3BA6NNM3 1639 aa15.2■□□□□ 0.02
SNORD88C-201ENST00000408061 RIMBP3Q9UFD9 1639 aa15.2■□□□□ 0.02
SNORD88C-201ENST00000408061 ARHGAP5Q13017 1502 aa15.19■□□□□ 0.02
SNORD88C-201ENST00000408061 ANKRD30AQ9BXX3 1397 aa15.19■□□□□ 0.02
SNORD88C-201ENST00000408061 SAMD9LQ8IVG5 1584 aa15.17■□□□□ 0.02
SNORD88C-201ENST00000408061 MBD5Q9P267 1494 aa15.17■□□□□ 0.02
SNORD88C-201ENST00000408061 MAPKBP1O60336 1514 aa15.17■□□□□ 0.02
SNORD88C-201ENST00000408061 NCOA1Q15788 1441 aa15.17■□□□□ 0.02
SNORD88C-201ENST00000408061 CCDC141Q6ZP82 1450 aa15.16■□□□□ 0.02
SNORD88C-201ENST00000408061 MAST1Q9Y2H9 1570 aa15.15■□□□□ 0.02
SNORD88C-201ENST00000408061 CHIC2Q9UKJ5 165 aa15.14■□□□□ 0.01
SNORD88C-201ENST00000408061 TIMELESSQ9UNS1 1208 aa15.14■□□□□ 0.01
SNORD88C-201ENST00000408061 C9orf84Q5VXU9 1444 aa15.13■□□□□ 0.01
SNORD88C-201ENST00000408061 RRP7BPQ9NSQ0 103 aa15.13■□□□□ 0.01
SNORD88C-201ENST00000408061 CYB5RLQ6IPT4 315 aa15.12■□□□□ 0.01
SNORD88C-201ENST00000408061 CFAP74Q9C0B2 1584 aa15.11■□□□□ 0.01
SNORD88C-201ENST00000408061 HNRNPMP52272 730 aaKnown RBP eCLIP15.11■□□□□ 0.01
SNORD88C-201ENST00000408061 RTEL1-TNFRSF6BF6WH68 1400 aa15.09■□□□□ 0.01
SNORD88C-201ENST00000408061 ABCC1P33527 1531 aa15.09■□□□□ 0.01
SNORD88C-201ENST00000408061 FANCAO15360 1455 aa15.08■□□□□ 0.01
SNORD88C-201ENST00000408061 SYCP2Q9BX26 1530 aa15.08■□□□□ 0.01
SNORD88C-201ENST00000408061 GLI2P10070 1586 aa15.08■□□□□ 0
SNORD88C-201ENST00000408061 CD109Q6YHK3 1445 aa15.07■□□□□ 0
SNORD88C-201ENST00000408061 PLXNC1O60486 1568 aa15.07■□□□□ 0
SNORD88C-201ENST00000408061 ANKRD50Q9ULJ7 1429 aa15.06■□□□□ 0
SNORD88C-201ENST00000408061 NEO1Q92859 1461 aa15.04■□□□□ -0
SNORD88C-201ENST00000408061 KIF15Q9NS87 1388 aa15.04■□□□□ -0
SNORD88C-201ENST00000408061 TRIM52Q96A61 297 aa15.03■□□□□ -0
SNORD88C-201ENST00000408061 ARHGEF12Q9NZN5 1544 aa15.02■□□□□ -0
SNORD88C-201ENST00000408061 DUOX2Q9NRD8 1548 aa15.02□□□□□ -0.01
SNORD88C-201ENST00000408061 ADGRL1O94910 1474 aa15.01□□□□□ -0.01
SNORD88C-201ENST00000408061 MPHOSPH9Q99550 1183 aa15.01□□□□□ -0.01
SNORD88C-201ENST00000408061 KDM6BO15054 1643 aa15□□□□□ -0.01
SNORD88C-201ENST00000408061 SPAG9O60271 1321 aaKnown RBP15□□□□□ -0.01
SNORD88C-201ENST00000408061 SCAPERQ9BY12 1400 aa15□□□□□ -0.01
SNORD88C-201ENST00000408061 MAP3K4Q9Y6R4 1608 aa14.99□□□□□ -0.01
SNORD88C-201ENST00000408061 KDM5DQ9BY66 1539 aa14.99□□□□□ -0.01
SNORD88C-201ENST00000408061 ERBINQ96RT1 1412 aa14.99□□□□□ -0.01
SNORD88C-201ENST00000408061 TRAPPC8Q9Y2L5 1435 aa14.99□□□□□ -0.01
SNORD88C-201ENST00000408061 ZNF518AQ6AHZ1 1483 aa14.98□□□□□ -0.01
SNORD88C-201ENST00000408061 SLC4A1APQ9BWU0 796 aaKnown RBP14.96□□□□□ -0.01
SNORD88C-201ENST00000408061 DIP2BQ9P265 1576 aa14.94□□□□□ -0.02
SNORD88C-201ENST00000408061 INO80Q9ULG1 1556 aaPredicted RBP14.94□□□□□ -0.02
SNORD88C-201ENST00000408061 TEX14Q8IWB6 1497 aa14.94□□□□□ -0.02
SNORD88C-201ENST00000408061 MLH3Q9UHC1 1453 aa14.94□□□□□ -0.02
SNORD88C-201ENST00000408061 ATP7AQ04656 1500 aa14.93□□□□□ -0.02
SNORD88C-201ENST00000408061 ZFYVE16Q7Z3T8 1539 aa14.93□□□□□ -0.02
SNORD88C-201ENST00000408061 AFAP1Q8N556 730 aa14.93□□□□□ -0.02
SNORD88C-201ENST00000408061 NUP155O75694 1391 aa14.93□□□□□ -0.02
SNORD88C-201ENST00000408061 PZPP20742 1482 aa14.93□□□□□ -0.02
SNORD88C-201ENST00000408061 UNC13BO14795 1591 aa14.93□□□□□ -0.02
SNORD88C-201ENST00000408061 KDM5CP41229 1560 aa14.92□□□□□ -0.02
SNORD88C-201ENST00000408061 POGZQ7Z3K3 1410 aa14.92□□□□□ -0.02
SNORD88C-201ENST00000408061 DENND4BO75064 1496 aaPredicted RBP14.91□□□□□ -0.02
SNORD88C-201ENST00000408061 ANKRD30BQ9BXX2 1392 aa14.91□□□□□ -0.02
SNORD88C-201ENST00000408061 FAM69CQ0P6D2 419 aa14.91□□□□□ -0.02
SNORD88C-201ENST00000408061 EIF2AK4Q9P2K8 1649 aaKnown RBP14.9□□□□□ -0.02
SNORD88C-201ENST00000408061 MAGI2Q86UL8 1455 aa14.89□□□□□ -0.03
SNORD88C-201ENST00000408061 DHX29Q7Z478 1369 aaKnown RBP14.89□□□□□ -0.03
SNORD88C-201ENST00000408061 TONSLQ96HA7 1378 aa14.88□□□□□ -0.03
SNORD88C-201ENST00000408061 SIN3AQ96ST3 1273 aa14.88□□□□□ -0.03
SNORD88C-201ENST00000408061 NEUROD1Q13562 356 aa14.87□□□□□ -0.03
SNORD88C-201ENST00000408061 KIDINS220Q9ULH0 1771 aa14.87□□□□□ -0.03
SNORD88C-201ENST00000408061 IQGAP3Q86VI3 1631 aa14.87□□□□□ -0.03
SNORD88C-201ENST00000408061 HECW2Q9P2P5 1572 aa14.86□□□□□ -0.03
SNORD88C-201ENST00000408061 PPP1R15AO75807 674 aaPredicted RBP14.86□□□□□ -0.03
SNORD88C-201ENST00000408061 PKD2Q13563 968 aa14.86□□□□□ -0.03
SNORD88C-201ENST00000408061 RPRD2Q5VT52 1461 aaKnown RBP14.85□□□□□ -0.03
SNORD88C-201ENST00000408061 MYT1LQ9UL68 1186 aa14.85□□□□□ -0.03
SNORD88C-201ENST00000408061 FAM135AQ9P2D6 1515 aa14.85□□□□□ -0.03
SNORD88C-201ENST00000408061 KANK1Q14678 1352 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms