RNA–Protein interactions for RNA: ENST00000406503.1

PRAME-206, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PRAME, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-206ENST00000406503 POGZQ7Z3K3 1410 aa21.48■■□□□ 1.03
PRAME-206ENST00000406503 CHIC1Q5VXU3 224 aa21.48■■□□□ 1.03
PRAME-206ENST00000406503 CDC42BPBQ9Y5S2 1711 aa21.48■■□□□ 1.03
PRAME-206ENST00000406503 MAGI2Q86UL8 1455 aa21.47■■□□□ 1.03
PRAME-206ENST00000406503 ARID4BQ4LE39 1312 aaPredicted RBP21.47■■□□□ 1.03
PRAME-206ENST00000406503 UBTFP17480 764 aaKnown RBP21.45■■□□□ 1.02
PRAME-206ENST00000406503 SCAPERQ9BY12 1400 aa21.45■■□□□ 1.02
PRAME-206ENST00000406503 KDM5CP41229 1560 aa21.41■■□□□ 1.02
PRAME-206ENST00000406503 TROQ12816 1431 aaPredicted RBP21.41■■□□□ 1.02
PRAME-206ENST00000406503 PREX2Q70Z35 1606 aa21.4■■□□□ 1.02
PRAME-206ENST00000406503 ARHGEF12Q9NZN5 1544 aa21.39■■□□□ 1.01
PRAME-206ENST00000406503 CDC42BPAQ5VT25 1732 aa21.38■■□□□ 1.01
PRAME-206ENST00000406503 ARHGAP5Q13017 1502 aa21.36■■□□□ 1.01
PRAME-206ENST00000406503 ATP1B4Q9UN42 357 aaPredicted RBP21.36■■□□□ 1.01
PRAME-206ENST00000406503 ATP10AO60312 1499 aa21.36■■□□□ 1.01
PRAME-206ENST00000406503 ITSN2Q9NZM3 1697 aa21.35■■□□□ 1.01
PRAME-206ENST00000406503 ABCA6Q8N139 1617 aa21.35■■□□□ 1.01
PRAME-206ENST00000406503 C9orf84Q5VXU9 1444 aa21.35■■□□□ 1.01
PRAME-206ENST00000406503 DIP2CQ9Y2E4 1556 aa21.35■■□□□ 1.01
PRAME-206ENST00000406503 ZNF518AQ6AHZ1 1483 aa21.33■■□□□ 1.01
PRAME-206ENST00000406503 EFCAB2Q5VUJ9 269 aa21.33■■□□□ 1.01
PRAME-206ENST00000406503 PREX1Q8TCU6 1659 aa21.33■■□□□ 1
PRAME-206ENST00000406503 ABCC1P33527 1531 aa21.31■■□□□ 1
PRAME-206ENST00000406503 REREQ9P2R6 1566 aa21.31■■□□□ 1
PRAME-206ENST00000406503 CLIP1P30622 1438 aa21.3■■□□□ 1
PRAME-206ENST00000406503 CASKIN1Q8WXD9 1431 aa21.3■■□□□ 1
PRAME-206ENST00000406503 MLECQ14165 292 aa21.3■■□□□ 1
PRAME-206ENST00000406503 CDK11AQ9UQ88 783 aaPredicted RBP21.3■■□□□ 1
PRAME-206ENST00000406503 CCDC18Q5T9S5 1454 aa21.29■■□□□ 1
PRAME-206ENST00000406503 KIDINS220Q9ULH0 1771 aa21.28■■□□□ 1
PRAME-206ENST00000406503 HSPA2P54652 639 aa21.28■■□□□ 1
PRAME-206ENST00000406503 PLPPR3Q6T4P5 718 aa21.27■■□□□ 1
PRAME-206ENST00000406503 FBXO41Q8TF61 875 aa21.27■■□□□ 1
PRAME-206ENST00000406503 C3P01024 1663 aa21.26■□□□□ 0.99
PRAME-206ENST00000406503 AFAP1Q8N556 730 aa21.26■□□□□ 0.99
PRAME-206ENST00000406503 STRCQ7RTU9 1775 aa21.25■□□□□ 0.99
PRAME-206ENST00000406503 MLH3Q9UHC1 1453 aa21.25■□□□□ 0.99
PRAME-206ENST00000406503 SETD1BQ9UPS6 1966 aaKnown RBP21.25■□□□□ 0.99
PRAME-206ENST00000406503 FYCO1Q9BQS8 1478 aa21.24■□□□□ 0.99
PRAME-206ENST00000406503 TRAPPC8Q9Y2L5 1435 aa21.23■□□□□ 0.99
PRAME-206ENST00000406503 SAMD9LQ8IVG5 1584 aa21.22■□□□□ 0.99
PRAME-206ENST00000406503 AGLP35573 1532 aa21.19■□□□□ 0.98
PRAME-206ENST00000406503 CEBPAP49715 358 aaPredicted RBP21.17■□□□□ 0.98
PRAME-206ENST00000406503 SYCP2Q9BX26 1530 aa21.14■□□□□ 0.98
PRAME-206ENST00000406503 GPATCH8Q9UKJ3 1502 aaKnown RBP21.13■□□□□ 0.97
PRAME-206ENST00000406503 SUPT6HQ7KZ85 1726 aaKnown RBP21.12■□□□□ 0.97
PRAME-206ENST00000406503 MROH2AA6NES4 1674 aa21.11■□□□□ 0.97
PRAME-206ENST00000406503 INO80Q9ULG1 1556 aaPredicted RBP21.1■□□□□ 0.97
PRAME-206ENST00000406503 PLXNC1O60486 1568 aa21.08■□□□□ 0.97
PRAME-206ENST00000406503 UHRF1BP1Q6BDS2 1440 aa21.07■□□□□ 0.96
PRAME-206ENST00000406503 MYT1LQ9UL68 1186 aa21.06■□□□□ 0.96
PRAME-206ENST00000406503 ATP7AQ04656 1500 aa21.05■□□□□ 0.96
PRAME-206ENST00000406503 TIAM1Q13009 1591 aa21.05■□□□□ 0.96
PRAME-206ENST00000406503 CLTCQ00610 1675 aaKnown RBP21.04■□□□□ 0.96
PRAME-206ENST00000406503 CERKQ8TCT0 537 aa21.03■□□□□ 0.96
PRAME-206ENST00000406503 ADGBQ8N7X0 1667 aa21.01■□□□□ 0.95
PRAME-206ENST00000406503 KIAA1107Q9UPP5 1409 aa21.01■□□□□ 0.95
PRAME-206ENST00000406503 ZNF777Q9ULD5 760 aaPredicted RBP21■□□□□ 0.95
PRAME-206ENST00000406503 CNTLNQ9NXG0 1405 aa20.99■□□□□ 0.95
PRAME-206ENST00000406503 HNRNPMP52272 730 aaKnown RBP eCLIP20.99■□□□□ 0.953e-11■□□□□ 9.5
PRAME-206ENST00000406503 ZNF142P52746 1687 aaPredicted RBP20.98■□□□□ 0.95
PRAME-206ENST00000406503 EHBP1L1Q8N3D4 1523 aa20.98■□□□□ 0.95
PRAME-206ENST00000406503 PLEKHH2Q8IVE3 1493 aa20.97■□□□□ 0.95
PRAME-206ENST00000406503 MYO3AQ8NEV4 1616 aa20.96■□□□□ 0.95
PRAME-206ENST00000406503 SPAG9O60271 1321 aaKnown RBP20.96■□□□□ 0.95
PRAME-206ENST00000406503 CCNB3Q8WWL7 1395 aa20.95■□□□□ 0.94
PRAME-206ENST00000406503 PTPRTO14522 1441 aa20.95■□□□□ 0.94
PRAME-206ENST00000406503 A2MP01023 1474 aa20.94■□□□□ 0.94
PRAME-206ENST00000406503 LTBP4Q8N2S1 1624 aa20.94■□□□□ 0.94
PRAME-206ENST00000406503 MTUS2Q5JR59 1369 aa20.94■□□□□ 0.94
PRAME-206ENST00000406503 NCOA1Q15788 1441 aa20.94■□□□□ 0.94
PRAME-206ENST00000406503 MBD5Q9P267 1494 aa20.94■□□□□ 0.94
PRAME-206ENST00000406503 CFDP1Q9UEE9 299 aaPredicted RBP20.93■□□□□ 0.94
PRAME-206ENST00000406503 NPATQ14207 1427 aa20.93■□□□□ 0.94
PRAME-206ENST00000406503 CAMSAP1Q5T5Y3 1602 aa20.93■□□□□ 0.94
PRAME-206ENST00000406503 ZMYM3Q14202 1370 aa20.91■□□□□ 0.94
PRAME-206ENST00000406503 ZNF644Q9H582 1327 aaPredicted RBP20.9■□□□□ 0.94
PRAME-206ENST00000406503 CEP162Q5TB80 1403 aa20.89■□□□□ 0.94
PRAME-206ENST00000406503 ESF1Q9H501 851 aaKnown RBP20.89■□□□□ 0.93
PRAME-206ENST00000406503 DMRT2Q9Y5R5 561 aa20.89■□□□□ 0.93
PRAME-206ENST00000406503 CEP170BQ9Y4F5 1589 aaPredicted RBP20.87■□□□□ 0.93
PRAME-206ENST00000406503 PTPRKQ15262 1439 aa20.87■□□□□ 0.93
PRAME-206ENST00000406503 RTEL1-TNFRSF6BF6WH68 1400 aa20.83■□□□□ 0.93
PRAME-206ENST00000406503 NCOA2Q15596 1464 aa20.82■□□□□ 0.92
PRAME-206ENST00000406503 CAMSAP2Q08AD1 1489 aa20.81■□□□□ 0.92
PRAME-206ENST00000406503 TCOF1Q13428 1488 aaKnown RBP20.8■□□□□ 0.92
PRAME-206ENST00000406503 DNMT1P26358 1616 aaKnown RBP20.79■□□□□ 0.92
PRAME-206ENST00000406503 POLR1AO95602 1720 aaPredicted RBP20.79■□□□□ 0.92
PRAME-206ENST00000406503 GGT6Q6P531 493 aa20.79■□□□□ 0.92
PRAME-206ENST00000406503 PLA2R1Q13018 1463 aa20.79■□□□□ 0.92
PRAME-206ENST00000406503 IQSEC2Q5JU85 1478 aa20.79■□□□□ 0.92
PRAME-206ENST00000406503 CCDC141Q6ZP82 1450 aa20.79■□□□□ 0.92
PRAME-206ENST00000406503 ARHGEF5Q12774 1597 aa20.78■□□□□ 0.92
PRAME-206ENST00000406503 DHX29Q7Z478 1369 aaKnown RBP20.76■□□□□ 0.91
PRAME-206ENST00000406503 NCKAP5LQ9HCH0 1330 aa20.75■□□□□ 0.91
PRAME-206ENST00000406503 KDM5DQ9BY66 1539 aa20.73■□□□□ 0.91
PRAME-206ENST00000406503 FAM135AQ9P2D6 1515 aa20.73■□□□□ 0.91
PRAME-206ENST00000406503 NEURL4Q96JN8 1562 aa20.72■□□□□ 0.91
PRAME-206ENST00000406503 PPP6R1Q9UPN7 881 aa20.72■□□□□ 0.91
PRAME-206ENST00000406503 A2ML1A8K2U0 1454 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms