RNA–Protein interactions for RNA: ENST00000405375.5

CDKN1A-203, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1A, Length 2,267 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-203ENST00000405375 JPH4Q96JJ6 628 aa23.13■■□□□ 1.29
CDKN1A-203ENST00000405375 ZNF644Q9H582 1327 aaPredicted RBP23.12■■□□□ 1.29
CDKN1A-203ENST00000405375 TRIM52Q96A61 297 aa23.11■■□□□ 1.29
CDKN1A-203ENST00000405375 ADCY10Q96PN6 1610 aa23.11■■□□□ 1.29
CDKN1A-203ENST00000405375 PELP1Q8IZL8 1130 aaKnown RBP23.1■■□□□ 1.29
CDKN1A-203ENST00000405375 MPHOSPH9Q99550 1183 aa23.1■■□□□ 1.29
CDKN1A-203ENST00000405375 HIRIP3Q9BW71 556 aaPredicted RBP23.1■■□□□ 1.29
CDKN1A-203ENST00000405375 ITSN2Q9NZM3 1697 aa23.08■■□□□ 1.28
CDKN1A-203ENST00000405375 GPATCH8Q9UKJ3 1502 aaKnown RBP23.07■■□□□ 1.28
CDKN1A-203ENST00000405375 KIF14Q15058 1648 aa23.06■■□□□ 1.28
CDKN1A-203ENST00000405375 KCNH8Q96L42 1107 aa23.05■■□□□ 1.28
CDKN1A-203ENST00000405375 CAMSAP2Q08AD1 1489 aa23.05■■□□□ 1.28
CDKN1A-203ENST00000405375 ABCA8O94911 1581 aa23.05■■□□□ 1.28
CDKN1A-203ENST00000405375 CFDP1Q9UEE9 299 aaPredicted RBP23.02■■□□□ 1.28
CDKN1A-203ENST00000405375 ANKRD30BQ9BXX2 1392 aa22.99■■□□□ 1.27
CDKN1A-203ENST00000405375 NCOA1Q15788 1441 aa22.98■■□□□ 1.27
CDKN1A-203ENST00000405375 ADGRL2O95490 1459 aa22.97■■□□□ 1.27
CDKN1A-203ENST00000405375 ATP10BO94823 1461 aa22.96■■□□□ 1.27
CDKN1A-203ENST00000405375 ADGBQ8N7X0 1667 aa22.96■■□□□ 1.27
CDKN1A-203ENST00000405375 FOXD1Q16676 465 aa22.96■■□□□ 1.27
CDKN1A-203ENST00000405375 CROCC2H7BZ55 1655 aa22.96■■□□□ 1.27
CDKN1A-203ENST00000405375 RPRD2Q5VT52 1461 aaKnown RBP22.95■■□□□ 1.26
CDKN1A-203ENST00000405375 ABCC10Q5T3U5 1492 aa22.94■■□□□ 1.26
CDKN1A-203ENST00000405375 CCER2I3L3R5 266 aa22.93■■□□□ 1.26
CDKN1A-203ENST00000405375 L3MBTL2Q969R5 705 aa22.93■■□□□ 1.26
CDKN1A-203ENST00000405375 PLEKHD1A6NEE1 506 aa22.92■■□□□ 1.26
CDKN1A-203ENST00000405375 CDC42BPAQ5VT25 1732 aa22.92■■□□□ 1.26
CDKN1A-203ENST00000405375 PZPP20742 1482 aa22.91■■□□□ 1.26
CDKN1A-203ENST00000405375 ANP32CO43423 234 aa22.91■■□□□ 1.26
CDKN1A-203ENST00000405375 TEX14Q8IWB6 1497 aa22.9■■□□□ 1.26
CDKN1A-203ENST00000405375 SLC4A1APQ9BWU0 796 aaKnown RBP22.89■■□□□ 1.26
CDKN1A-203ENST00000405375 ZNF777Q9ULD5 760 aaPredicted RBP22.89■■□□□ 1.25
CDKN1A-203ENST00000405375 HSPA5P11021 654 aaKnown RBP22.87■■□□□ 1.25
CDKN1A-203ENST00000405375 ANKRD30AQ9BXX3 1397 aa22.86■■□□□ 1.25
CDKN1A-203ENST00000405375 PTPRGP23470 1445 aa22.85■■□□□ 1.25
CDKN1A-203ENST00000405375 SHANK2Q9UPX8 1470 aa22.85■■□□□ 1.25
CDKN1A-203ENST00000405375 EIF4G2P78344 907 aaKnown RBP eCLIP22.83■■□□□ 1.251e-7■■■□□ 17.9
CDKN1A-203ENST00000405375 WASHC2AQ641Q2 1341 aa22.83■■□□□ 1.24
CDKN1A-203ENST00000405375 CHD1O14646 1710 aa22.82■■□□□ 1.24
CDKN1A-203ENST00000405375 ANKRD50Q9ULJ7 1429 aa22.81■■□□□ 1.24
CDKN1A-203ENST00000405375 SUPT16HQ9Y5B9 1047 aaKnown RBP22.8■■□□□ 1.24
CDKN1A-203ENST00000405375 NBPF8Q3BBV2 869 aa22.79■■□□□ 1.24
CDKN1A-203ENST00000405375 KIAA1107Q9UPP5 1409 aa22.79■■□□□ 1.24
CDKN1A-203ENST00000405375 C9orf84Q5VXU9 1444 aa22.79■■□□□ 1.24
CDKN1A-203ENST00000405375 SHROOM2Q13796 1616 aa22.78■■□□□ 1.24
CDKN1A-203ENST00000405375 ARHGEF5Q12774 1597 aa22.75■■□□□ 1.23
CDKN1A-203ENST00000405375 MBD5Q9P267 1494 aa22.74■■□□□ 1.23
CDKN1A-203ENST00000405375 SPATA31E1Q6ZUB1 1445 aa22.73■■□□□ 1.23
CDKN1A-203ENST00000405375 PKD2Q13563 968 aa22.71■■□□□ 1.23
CDKN1A-203ENST00000405375 PREX2Q70Z35 1606 aa22.71■■□□□ 1.23
CDKN1A-203ENST00000405375 KDM5DQ9BY66 1539 aa22.71■■□□□ 1.23
CDKN1A-203ENST00000405375 CDC42BPBQ9Y5S2 1711 aa22.7■■□□□ 1.23
CDKN1A-203ENST00000405375 CNTLNQ9NXG0 1405 aa22.7■■□□□ 1.22
CDKN1A-203ENST00000405375 SAMD9LQ8IVG5 1584 aa22.69■■□□□ 1.22
CDKN1A-203ENST00000405375 C11orf95C9JLR9 678 aaPredicted RBP22.69■■□□□ 1.22
CDKN1A-203ENST00000405375 TSPY4P0CV99 314 aa22.69■■□□□ 1.22
CDKN1A-203ENST00000405375 TSPY10P0CW01 314 aa22.69■■□□□ 1.22
CDKN1A-203ENST00000405375 CCDC7Q96M83 1385 aa22.69■■□□□ 1.22
CDKN1A-203ENST00000405375 HNRNPMP52272 730 aaKnown RBP eCLIP22.67■■□□□ 1.22
CDKN1A-203ENST00000405375 NUP155O75694 1391 aa22.67■■□□□ 1.22
CDKN1A-203ENST00000405375 KIF15Q9NS87 1388 aa22.66■■□□□ 1.22
CDKN1A-203ENST00000405375 CCDC141Q6ZP82 1450 aa22.66■■□□□ 1.22
CDKN1A-203ENST00000405375 ERCC6L2Q5T890 1561 aa22.64■■□□□ 1.21
CDKN1A-203ENST00000405375 POLR1AO95602 1720 aaPredicted RBP22.64■■□□□ 1.21
CDKN1A-203ENST00000405375 ABCC2Q92887 1545 aa22.63■■□□□ 1.21
CDKN1A-203ENST00000405375 TTC37Q6PGP7 1564 aa22.62■■□□□ 1.21
CDKN1A-203ENST00000405375 RSPH4AQ5TD94 716 aa22.61■■□□□ 1.21
CDKN1A-203ENST00000405375 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.6■■□□□ 1.21
CDKN1A-203ENST00000405375 KIF7Q2M1P5 1343 aa22.59■■□□□ 1.21
CDKN1A-203ENST00000405375 UHRF1BP1Q6BDS2 1440 aa22.58■■□□□ 1.21
CDKN1A-203ENST00000405375 MAST1Q9Y2H9 1570 aa22.57■■□□□ 1.2
CDKN1A-203ENST00000405375 SYCP2Q9BX26 1530 aa22.57■■□□□ 1.2
CDKN1A-203ENST00000405375 ARHGEF12Q9NZN5 1544 aa22.57■■□□□ 1.2
CDKN1A-203ENST00000405375 ARHGAP5Q13017 1502 aa22.55■■□□□ 1.2
CDKN1A-203ENST00000405375 CLASP1Q7Z460 1538 aa22.54■■□□□ 1.2
CDKN1A-203ENST00000405375 PRKRIP1Q9H875 184 aaPredicted RBP22.54■■□□□ 1.2
CDKN1A-203ENST00000405375 USP47Q96K76 1375 aa22.53■■□□□ 1.2
CDKN1A-203ENST00000405375 FAM135AQ9P2D6 1515 aa22.52■■□□□ 1.2
CDKN1A-203ENST00000405375 MYO5CQ9NQX4 1742 aa22.52■■□□□ 1.2
CDKN1A-203ENST00000405375 KDM5CP41229 1560 aa22.52■■□□□ 1.2
CDKN1A-203ENST00000405375 RALGAPBQ86X10 1494 aa22.52■■□□□ 1.2
CDKN1A-203ENST00000405375 PLEKHH2Q8IVE3 1493 aa22.5■■□□□ 1.19
CDKN1A-203ENST00000405375 BCORL1Q5H9F3 1711 aa22.49■■□□□ 1.19
CDKN1A-203ENST00000405375 ZNF326Q5BKZ1 582 aaKnown RBP22.48■■□□□ 1.19
CDKN1A-203ENST00000405375 UHRF1BP1LA0JNW5 1464 aa22.48■■□□□ 1.19
CDKN1A-203ENST00000405375 UNC13BO14795 1591 aa22.48■■□□□ 1.19
CDKN1A-203ENST00000405375 PLXNC1O60486 1568 aa22.48■■□□□ 1.19
CDKN1A-203ENST00000405375 FKBP8Q14318 412 aa22.47■■□□□ 1.19
CDKN1A-203ENST00000405375 CCDC184Q52MB2 194 aa22.47■■□□□ 1.19
CDKN1A-203ENST00000405375 HNRNPUQ00839 825 aaKnown RBP eCLIP22.46■■□□□ 1.19
CDKN1A-203ENST00000405375 ZCCHC11Q5TAX3 1644 aaKnown RBP22.46■■□□□ 1.19
CDKN1A-203ENST00000405375 ARID4BQ4LE39 1312 aaPredicted RBP22.44■■□□□ 1.18
CDKN1A-203ENST00000405375 PLCH2O75038 1416 aa22.43■■□□□ 1.18
CDKN1A-203ENST00000405375 DHX29Q7Z478 1369 aaKnown RBP22.41■■□□□ 1.18
CDKN1A-203ENST00000405375 IQGAP3Q86VI3 1631 aa22.4■■□□□ 1.18
CDKN1A-203ENST00000405375 NEFLP07196 543 aa22.4■■□□□ 1.18
CDKN1A-203ENST00000405375 PLA2R1Q13018 1463 aa22.39■■□□□ 1.18
CDKN1A-203ENST00000405375 DUOX2Q9NRD8 1548 aa22.39■■□□□ 1.17
CDKN1A-203ENST00000405375 CARD11Q9BXL7 1154 aa22.38■■□□□ 1.17
CDKN1A-203ENST00000405375 DCAF11Q8TEB1 546 aa22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms