RNA–Protein interactions for RNA: ENST00000405356.5

NOLC1-202, Transcript of nucleolar and coiled-body phosphoprotein 1, humanhuman

TSL 1 (best) BASIC

Gene NOLC1, Length 3,967 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOLC1-202ENST00000405356 CHD1O14646 1710 aa12.15□□□□□ -0.46
NOLC1-202ENST00000405356 TSHZ2Q9NRE2 1034 aa12.15□□□□□ -0.46
NOLC1-202ENST00000405356 CHGAP10645 457 aaKnown RBP12.14□□□□□ -0.47
NOLC1-202ENST00000405356 ANKRD30AQ9BXX3 1397 aa12.14□□□□□ -0.47
NOLC1-202ENST00000405356 TRHP20396 242 aaPredicted RBP12.14□□□□□ -0.47
NOLC1-202ENST00000405356 BCL11AQ9H165 835 aa12.14□□□□□ -0.47
NOLC1-202ENST00000405356 PLPPR3Q6T4P5 718 aa12.13□□□□□ -0.47
NOLC1-202ENST00000405356 HIRIP3Q9BW71 556 aaPredicted RBP12.13□□□□□ -0.47
NOLC1-202ENST00000405356 KDM2AQ9Y2K7 1162 aa12.13□□□□□ -0.47
NOLC1-202ENST00000405356 DHX57Q6P158 1386 aaKnown RBP12.13□□□□□ -0.47
NOLC1-202ENST00000405356 ANP32EQ9BTT0 268 aa12.12□□□□□ -0.47
NOLC1-202ENST00000405356 ARHGEF11O15085 1522 aa12.11□□□□□ -0.47
NOLC1-202ENST00000405356 ATP10BO94823 1461 aa12.11□□□□□ -0.47
NOLC1-202ENST00000405356 SPAG9O60271 1321 aaKnown RBP12.11□□□□□ -0.47
NOLC1-202ENST00000405356 MPHOSPH9Q99550 1183 aa12.11□□□□□ -0.47
NOLC1-202ENST00000405356 RGL3Q3MIN7 710 aa12.1□□□□□ -0.47
NOLC1-202ENST00000405356 CLSPNQ9HAW4 1339 aa12.1□□□□□ -0.47
NOLC1-202ENST00000405356 ARHGAP5Q13017 1502 aa12.09□□□□□ -0.47
NOLC1-202ENST00000405356 PKD2Q13563 968 aa12.09□□□□□ -0.47
NOLC1-202ENST00000405356 ESF1Q9H501 851 aaKnown RBP12.09□□□□□ -0.47
NOLC1-202ENST00000405356 NUP155O75694 1391 aa12.09□□□□□ -0.47
NOLC1-202ENST00000405356 CFAP43Q8NDM7 1665 aa12.09□□□□□ -0.47
NOLC1-202ENST00000405356 MIA2Q96PC5 1412 aa12.08□□□□□ -0.48
NOLC1-202ENST00000405356 FAM69CQ0P6D2 419 aa12.08□□□□□ -0.48
NOLC1-202ENST00000405356 RSPH4AQ5TD94 716 aa12.08□□□□□ -0.48
NOLC1-202ENST00000405356 AFAP1Q8N556 730 aa12.07□□□□□ -0.48
NOLC1-202ENST00000405356 GGT6Q6P531 493 aa12.06□□□□□ -0.48
NOLC1-202ENST00000405356 SENP3Q9H4L4 574 aaPredicted RBP12.06□□□□□ -0.48
NOLC1-202ENST00000405356 PTPN23Q9H3S7 1636 aa12.05□□□□□ -0.48
NOLC1-202ENST00000405356 KIF3BO15066 747 aa12.05□□□□□ -0.48
NOLC1-202ENST00000405356 MLECQ14165 292 aa12.04□□□□□ -0.48
NOLC1-202ENST00000405356 ARID4BQ4LE39 1312 aaPredicted RBP12.04□□□□□ -0.48
NOLC1-202ENST00000405356 KIF14Q15058 1648 aa12.04□□□□□ -0.48
NOLC1-202ENST00000405356 ERCC6L2Q5T890 1561 aa12.03□□□□□ -0.48
NOLC1-202ENST00000405356 KIF15Q9NS87 1388 aa12.03□□□□□ -0.48
NOLC1-202ENST00000405356 MAGI3Q5TCQ9 1506 aa12.02□□□□□ -0.48
NOLC1-202ENST00000405356 DAPK1P53355 1430 aa12.02□□□□□ -0.48
NOLC1-202ENST00000405356 STAG3Q9UJ98 1225 aa12.02□□□□□ -0.49
NOLC1-202ENST00000405356 FKBP8Q14318 412 aa12.02□□□□□ -0.49
NOLC1-202ENST00000405356 CAMSAP2Q08AD1 1489 aa12.01□□□□□ -0.49
NOLC1-202ENST00000405356 GPATCH8Q9UKJ3 1502 aaKnown RBP12.01□□□□□ -0.49
NOLC1-202ENST00000405356 DDX10Q13206 875 aaKnown RBP12.01□□□□□ -0.49
NOLC1-202ENST00000405356 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12□□□□□ -0.49
NOLC1-202ENST00000405356 C9orf84Q5VXU9 1444 aa11.99□□□□□ -0.49
NOLC1-202ENST00000405356 ANKRD50Q9ULJ7 1429 aa11.99□□□□□ -0.49
NOLC1-202ENST00000405356 HFM1A2PYH4 1435 aa11.98□□□□□ -0.49
NOLC1-202ENST00000405356 ABCC5O15440 1437 aa11.98□□□□□ -0.49
NOLC1-202ENST00000405356 PTPRKQ15262 1439 aa11.98□□□□□ -0.49
NOLC1-202ENST00000405356 KANK1Q14678 1352 aa11.98□□□□□ -0.49
NOLC1-202ENST00000405356 ABCC2Q92887 1545 aa11.98□□□□□ -0.49
NOLC1-202ENST00000405356 NAIPQ13075 1403 aa11.98□□□□□ -0.49
NOLC1-202ENST00000405356 DCAF11Q8TEB1 546 aa11.96□□□□□ -0.49
NOLC1-202ENST00000405356 ASXL2Q76L83 1435 aa11.96□□□□□ -0.5
NOLC1-202ENST00000405356 ABCA8O94911 1581 aa11.95□□□□□ -0.5
NOLC1-202ENST00000405356 RAPGEF3O95398 923 aa11.95□□□□□ -0.5
NOLC1-202ENST00000405356 L3MBTL2Q969R5 705 aa11.95□□□□□ -0.5
NOLC1-202ENST00000405356 SCAPERQ9BY12 1400 aa11.95□□□□□ -0.5
NOLC1-202ENST00000405356 EIF4G2P78344 907 aaKnown RBP eCLIP11.94□□□□□ -0.5
NOLC1-202ENST00000405356 CD109Q6YHK3 1445 aa11.94□□□□□ -0.5
NOLC1-202ENST00000405356 PPP1R15AO75807 674 aaPredicted RBP11.94□□□□□ -0.5
NOLC1-202ENST00000405356 TIMELESSQ9UNS1 1208 aa11.93□□□□□ -0.5
NOLC1-202ENST00000405356 ANP32CO43423 234 aa11.92□□□□□ -0.5
NOLC1-202ENST00000405356 CCDC141Q6ZP82 1450 aa11.92□□□□□ -0.5
NOLC1-202ENST00000405356 PLEKHH2Q8IVE3 1493 aa11.92□□□□□ -0.5
NOLC1-202ENST00000405356 WDR7Q9Y4E6 1490 aa11.91□□□□□ -0.5
NOLC1-202ENST00000405356 WASHC2CQ9Y4E1 1318 aa11.91□□□□□ -0.5
NOLC1-202ENST00000405356 ITSN2Q9NZM3 1697 aa11.9□□□□□ -0.5
NOLC1-202ENST00000405356 AKNAQ7Z591 1439 aa11.9□□□□□ -0.5
NOLC1-202ENST00000405356 CARD11Q9BXL7 1154 aa11.9□□□□□ -0.5
NOLC1-202ENST00000405356 NCOA1Q15788 1441 aa11.89□□□□□ -0.51
NOLC1-202ENST00000405356 ROCK1Q13464 1354 aa11.89□□□□□ -0.51
NOLC1-202ENST00000405356 FANCAO15360 1455 aa11.89□□□□□ -0.51
NOLC1-202ENST00000405356 RBM19Q9Y4C8 960 aaKnown RBP11.89□□□□□ -0.51
NOLC1-202ENST00000405356 PLCH2O75038 1416 aa11.88□□□□□ -0.51
NOLC1-202ENST00000405356 NEFLP07196 543 aa11.88□□□□□ -0.51
NOLC1-202ENST00000405356 ADGRL1O94910 1474 aa11.88□□□□□ -0.51
NOLC1-202ENST00000405356 TCOF1Q13428 1488 aaKnown RBP11.88□□□□□ -0.51
NOLC1-202ENST00000405356 CLASP1Q7Z460 1538 aa11.87□□□□□ -0.51
NOLC1-202ENST00000405356 SYCP2Q9BX26 1530 aa11.87□□□□□ -0.51
NOLC1-202ENST00000405356 LRRIQ1Q96JM4 1722 aa11.87□□□□□ -0.51
NOLC1-202ENST00000405356 HSPA5P11021 654 aaKnown RBP11.85□□□□□ -0.51
NOLC1-202ENST00000405356 CCDC144AA2RUR9 1427 aa11.85□□□□□ -0.51
NOLC1-202ENST00000405356 IRX6P78412 446 aaPredicted RBP11.84□□□□□ -0.51
NOLC1-202ENST00000405356 TRAPPC8Q9Y2L5 1435 aa11.83□□□□□ -0.52
NOLC1-202ENST00000405356 NUTM2DQ5VT03 806 aaPredicted RBP11.83□□□□□ -0.52
NOLC1-202ENST00000405356 KDM5BQ9UGL1 1544 aa11.83□□□□□ -0.52
NOLC1-202ENST00000405356 ABCC10Q5T3U5 1492 aa11.83□□□□□ -0.52
NOLC1-202ENST00000405356 ZCCHC11Q5TAX3 1644 aaKnown RBP11.82□□□□□ -0.52
NOLC1-202ENST00000405356 UHRF1BP1LA0JNW5 1464 aa11.82□□□□□ -0.52
NOLC1-202ENST00000405356 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.82□□□□□ -0.52
NOLC1-202ENST00000405356 ERICH6Q7L0X2 663 aa11.81□□□□□ -0.52
NOLC1-202ENST00000405356 DNMT1P26358 1616 aaKnown RBP11.8□□□□□ -0.52
NOLC1-202ENST00000405356 KIAA1107Q9UPP5 1409 aa11.8□□□□□ -0.52
NOLC1-202ENST00000405356 SHROOM2Q13796 1616 aa11.8□□□□□ -0.52
NOLC1-202ENST00000405356 TTC37Q6PGP7 1564 aa11.79□□□□□ -0.52
NOLC1-202ENST00000405356 MSH5O43196 834 aa11.78□□□□□ -0.52
NOLC1-202ENST00000405356 ROCK2O75116 1388 aaKnown RBP11.77□□□□□ -0.52
NOLC1-202ENST00000405356 DENND4BO75064 1496 aaPredicted RBP11.76□□□□□ -0.53
NOLC1-202ENST00000405356 MAPKBP1O60336 1514 aa11.76□□□□□ -0.53
NOLC1-202ENST00000405356 MYO5CQ9NQX4 1742 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms