RNA–Protein interactions for RNA: ENST00000405097.5

RDX-202, Transcript of radixin, humanhuman

TSL 1 (best) BASIC

Gene RDX, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-202ENST00000405097 MAGI1Q96QZ7 1491 aaPredicted RBP28.64■■■□□ 2.17
RDX-202ENST00000405097 PRG4Q92954 1404 aaPredicted RBP28.63■■■□□ 2.17
RDX-202ENST00000405097 CEP170Q5SW79 1584 aa28.63■■■□□ 2.17
RDX-202ENST00000405097 DNMT1P26358 1616 aaKnown RBP28.61■■■□□ 2.17
RDX-202ENST00000405097 ROCK1Q13464 1354 aa28.61■■■□□ 2.17
RDX-202ENST00000405097 PLB1Q6P1J6 1458 aa28.61■■■□□ 2.17
RDX-202ENST00000405097 SYNJ2O15056 1496 aa28.6■■■□□ 2.17
RDX-202ENST00000405097 HSPA5P11021 654 aaKnown RBP28.58■■■□□ 2.17
RDX-202ENST00000405097 L3MBTL2Q969R5 705 aa28.58■■■□□ 2.17
RDX-202ENST00000405097 TROQ12816 1431 aaPredicted RBP28.56■■■□□ 2.16
RDX-202ENST00000405097 CFDP1Q9UEE9 299 aaPredicted RBP28.53■■■□□ 2.16
RDX-202ENST00000405097 JPH4Q96JJ6 628 aa28.53■■■□□ 2.16
RDX-202ENST00000405097 WASHC2AQ641Q2 1341 aa28.52■■■□□ 2.16
RDX-202ENST00000405097 ANKRD30BQ9BXX2 1392 aa28.51■■■□□ 2.15
RDX-202ENST00000405097 SLC4A1APQ9BWU0 796 aaKnown RBP28.5■■■□□ 2.15
RDX-202ENST00000405097 ZNF777Q9ULD5 760 aaPredicted RBP28.5■■■□□ 2.15
RDX-202ENST00000405097 EIF4G2P78344 907 aaKnown RBP eCLIP28.5■■■□□ 2.151e-35■■■■■ 36.1
RDX-202ENST00000405097 CAMSAP2Q08AD1 1489 aa28.49■■■□□ 2.15
RDX-202ENST00000405097 CARMIL2Q6F5E8 1435 aa28.48■■■□□ 2.15
RDX-202ENST00000405097 KIF14Q15058 1648 aa28.47■■■□□ 2.15
RDX-202ENST00000405097 GPATCH8Q9UKJ3 1502 aaKnown RBP28.47■■■□□ 2.15
RDX-202ENST00000405097 NUP160Q12769 1436 aa28.46■■■□□ 2.15
RDX-202ENST00000405097 RPRD2Q5VT52 1461 aaKnown RBP28.45■■■□□ 2.14
RDX-202ENST00000405097 NBPF8Q3BBV2 869 aa28.42■■■□□ 2.14
RDX-202ENST00000405097 ITSN2Q9NZM3 1697 aa28.41■■■□□ 2.14
RDX-202ENST00000405097 BCANQ96GW7 911 aa28.4■■■□□ 2.14
RDX-202ENST00000405097 NCOA1Q15788 1441 aa28.4■■■□□ 2.14
RDX-202ENST00000405097 FKBP8Q14318 412 aa28.4■■■□□ 2.14
RDX-202ENST00000405097 TEX14Q8IWB6 1497 aa28.39■■■□□ 2.13
RDX-202ENST00000405097 C11orf95C9JLR9 678 aaPredicted RBP28.37■■■□□ 2.13
RDX-202ENST00000405097 ADCY10Q96PN6 1610 aa28.37■■■□□ 2.13
RDX-202ENST00000405097 PZPP20742 1482 aa28.37■■■□□ 2.13
RDX-202ENST00000405097 PLEKHD1A6NEE1 506 aa28.34■■■□□ 2.13
RDX-202ENST00000405097 ADGBQ8N7X0 1667 aa28.31■■■□□ 2.12
RDX-202ENST00000405097 ABCA8O94911 1581 aa28.29■■■□□ 2.12
RDX-202ENST00000405097 ADGRL2O95490 1459 aa28.29■■■□□ 2.12
RDX-202ENST00000405097 CNTLNQ9NXG0 1405 aa28.29■■■□□ 2.12
RDX-202ENST00000405097 ATP10BO94823 1461 aa28.29■■■□□ 2.12
RDX-202ENST00000405097 CCDC7Q96M83 1385 aa28.29■■■□□ 2.12
RDX-202ENST00000405097 ANKRD30AQ9BXX3 1397 aa28.28■■■□□ 2.12
RDX-202ENST00000405097 CROCC2H7BZ55 1655 aa28.28■■■□□ 2.12
RDX-202ENST00000405097 HNRNPUQ00839 825 aaKnown RBP eCLIP28.26■■■□□ 2.11
RDX-202ENST00000405097 PKD2Q13563 968 aa28.25■■■□□ 2.11
RDX-202ENST00000405097 NEFLP07196 543 aa28.24■■■□□ 2.11
RDX-202ENST00000405097 CDC42BPAQ5VT25 1732 aa28.23■■■□□ 2.11
RDX-202ENST00000405097 ABCC10Q5T3U5 1492 aa28.23■■■□□ 2.11
RDX-202ENST00000405097 KIAA1107Q9UPP5 1409 aa28.23■■■□□ 2.11
RDX-202ENST00000405097 ANKRD50Q9ULJ7 1429 aa28.23■■■□□ 2.11
RDX-202ENST00000405097 TSHZ2Q9NRE2 1034 aa28.22■■■□□ 2.11
RDX-202ENST00000405097 CCDC184Q52MB2 194 aa28.21■■■□□ 2.11
RDX-202ENST00000405097 SPATA31E1Q6ZUB1 1445 aa28.21■■■□□ 2.11
RDX-202ENST00000405097 ZNF326Q5BKZ1 582 aaKnown RBP28.18■■■□□ 2.1
RDX-202ENST00000405097 KIF7Q2M1P5 1343 aa28.18■■■□□ 2.1
RDX-202ENST00000405097 C9orf84Q5VXU9 1444 aa28.18■■■□□ 2.1
RDX-202ENST00000405097 PRKRIP1Q9H875 184 aaPredicted RBP28.16■■■□□ 2.1
RDX-202ENST00000405097 PTPRGP23470 1445 aa28.14■■■□□ 2.1
RDX-202ENST00000405097 HNRNPMP52272 730 aaKnown RBP eCLIP28.14■■■□□ 2.1
RDX-202ENST00000405097 NUP155O75694 1391 aa28.14■■■□□ 2.1
RDX-202ENST00000405097 TSPY4P0CV99 314 aa28.13■■■□□ 2.09
RDX-202ENST00000405097 TSPY10P0CW01 314 aa28.13■■■□□ 2.09
RDX-202ENST00000405097 MBD5Q9P267 1494 aa28.13■■■□□ 2.09
RDX-202ENST00000405097 SHANK2Q9UPX8 1470 aa28.11■■■□□ 2.09
RDX-202ENST00000405097 KIF15Q9NS87 1388 aa28.06■■■□□ 2.08
RDX-202ENST00000405097 MRS2Q9HD23 443 aa28.05■■■□□ 2.08
RDX-202ENST00000405097 USP47Q96K76 1375 aa28.05■■■□□ 2.08
RDX-202ENST00000405097 FAM9BQ8IZU0 186 aa28.05■■■□□ 2.08
RDX-202ENST00000405097 POLR3GLQ9BT43 218 aa28.03■■■□□ 2.08
RDX-202ENST00000405097 POLR1AO95602 1720 aaPredicted RBP28.02■■■□□ 2.08
RDX-202ENST00000405097 CNGB1Q14028 1251 aaPredicted RBP27.99■■■□□ 2.07
RDX-202ENST00000405097 ARHGEF5Q12774 1597 aa27.98■■■□□ 2.07
RDX-202ENST00000405097 BCORL1Q5H9F3 1711 aa27.98■■■□□ 2.07
RDX-202ENST00000405097 SAMD9LQ8IVG5 1584 aa27.97■■■□□ 2.07
RDX-202ENST00000405097 CHD1O14646 1710 aa27.96■■■□□ 2.07
RDX-202ENST00000405097 IRX6P78412 446 aaPredicted RBP27.96■■■□□ 2.07
RDX-202ENST00000405097 KDM5DQ9BY66 1539 aa27.96■■■□□ 2.07
RDX-202ENST00000405097 KDM2AQ9Y2K7 1162 aa27.96■■■□□ 2.07
RDX-202ENST00000405097 CDC42BPBQ9Y5S2 1711 aa27.95■■■□□ 2.07
RDX-202ENST00000405097 CCDC141Q6ZP82 1450 aa27.95■■■□□ 2.06
RDX-202ENST00000405097 KDM5CP41229 1560 aa27.93■■■□□ 2.06
RDX-202ENST00000405097 PREX2Q70Z35 1606 aa27.93■■■□□ 2.06
RDX-202ENST00000405097 UHRF1BP1Q6BDS2 1440 aa27.93■■■□□ 2.06
RDX-202ENST00000405097 CARD11Q9BXL7 1154 aa27.91■■■□□ 2.06
RDX-202ENST00000405097 DHX29Q7Z478 1369 aaKnown RBP27.91■■■□□ 2.06
RDX-202ENST00000405097 RALGAPBQ86X10 1494 aa27.9■■■□□ 2.06
RDX-202ENST00000405097 DCAF11Q8TEB1 546 aa27.89■■■□□ 2.06
RDX-202ENST00000405097 ARHGEF12Q9NZN5 1544 aa27.87■■■□□ 2.05
RDX-202ENST00000405097 SYCP2Q9BX26 1530 aa27.87■■■□□ 2.05
RDX-202ENST00000405097 TTC37Q6PGP7 1564 aa27.86■■■□□ 2.05
RDX-202ENST00000405097 ERCC6L2Q5T890 1561 aa27.85■■■□□ 2.05
RDX-202ENST00000405097 RSPH4AQ5TD94 716 aa27.85■■■□□ 2.05
RDX-202ENST00000405097 ARHGAP5Q13017 1502 aa27.85■■■□□ 2.05
RDX-202ENST00000405097 FAM135AQ9P2D6 1515 aa27.85■■■□□ 2.05
RDX-202ENST00000405097 ZBED9Q6R2W3 1325 aa27.84■■■□□ 2.05
RDX-202ENST00000405097 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.83■■■□□ 2.05
RDX-202ENST00000405097 SHROOM2Q13796 1616 aa27.82■■■□□ 2.04
RDX-202ENST00000405097 ST20-MTHFSA0A0A6YYL1 179 aa27.81■■■□□ 2.04
RDX-202ENST00000405097 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.81■■■□□ 2.046e-8■■■□□ 16.9
RDX-202ENST00000405097 ARID4BQ4LE39 1312 aaPredicted RBP27.81■■■□□ 2.04
RDX-202ENST00000405097 ABCC2Q92887 1545 aa27.76■■■□□ 2.03
RDX-202ENST00000405097 RGL3Q3MIN7 710 aa27.75■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms