RNA–Protein interactions for RNA: ENST00000402583.5

CBX1-203, Transcript of chromobox 1, humanhuman

TSL 4

Gene CBX1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-203ENST00000402583 CDK13Q14004 1512 aaKnown RBP13.41□□□□□ -0.26
CBX1-203ENST00000402583 RNF39Q9H2S5 420 aa13.41□□□□□ -0.26
CBX1-203ENST00000402583 NUP160Q12769 1436 aa13.4□□□□□ -0.26
CBX1-203ENST00000402583 NAIPQ13075 1403 aa13.39□□□□□ -0.27
CBX1-203ENST00000402583 CEP170Q5SW79 1584 aa13.39□□□□□ -0.27
CBX1-203ENST00000402583 PTPRKQ15262 1439 aa13.39□□□□□ -0.27
CBX1-203ENST00000402583 NUP153P49790 1475 aaKnown RBP13.38□□□□□ -0.27
CBX1-203ENST00000402583 MIER1Q8N108 512 aa13.38□□□□□ -0.27
CBX1-203ENST00000402583 FBLN2P98095 1184 aa13.36□□□□□ -0.27
CBX1-203ENST00000402583 NEUROD1Q13562 356 aa13.36□□□□□ -0.27
CBX1-203ENST00000402583 GCC2Q8IWJ2 1684 aa13.34□□□□□ -0.27
CBX1-203ENST00000402583 TROQ12816 1431 aaPredicted RBP13.34□□□□□ -0.27
CBX1-203ENST00000402583 JPH4Q96JJ6 628 aa13.34□□□□□ -0.27
CBX1-203ENST00000402583 SIN3AQ96ST3 1273 aa13.34□□□□□ -0.27
CBX1-203ENST00000402583 TONSLQ96HA7 1378 aa13.33□□□□□ -0.27
CBX1-203ENST00000402583 ROCK1Q13464 1354 aa13.32□□□□□ -0.28
CBX1-203ENST00000402583 PPP1R15AO75807 674 aaPredicted RBP13.31□□□□□ -0.28
CBX1-203ENST00000402583 ATF5Q9Y2D1 282 aaPredicted RBP13.31□□□□□ -0.28
CBX1-203ENST00000402583 ARID3CA6NKF2 412 aa13.3□□□□□ -0.28
CBX1-203ENST00000402583 DAPK1P53355 1430 aa13.3□□□□□ -0.28
CBX1-203ENST00000402583 C1QBPQ07021 282 aaKnown RBP13.29□□□□□ -0.28
CBX1-203ENST00000402583 DNMT1P26358 1616 aaKnown RBP13.28□□□□□ -0.28
CBX1-203ENST00000402583 ADCY10Q96PN6 1610 aa13.28□□□□□ -0.28
CBX1-203ENST00000402583 ITSN2Q9NZM3 1697 aa13.28□□□□□ -0.28
CBX1-203ENST00000402583 RRP7BPQ9NSQ0 103 aa13.28□□□□□ -0.28
CBX1-203ENST00000402583 CHIC2Q9UKJ5 165 aa13.28□□□□□ -0.28
CBX1-203ENST00000402583 PLB1Q6P1J6 1458 aa13.28□□□□□ -0.28
CBX1-203ENST00000402583 ABCA8O94911 1581 aa13.26□□□□□ -0.29
CBX1-203ENST00000402583 TRIM52Q96A61 297 aa13.26□□□□□ -0.29
CBX1-203ENST00000402583 ABCC5O15440 1437 aa13.25□□□□□ -0.29
CBX1-203ENST00000402583 PRG4Q92954 1404 aaPredicted RBP13.25□□□□□ -0.29
CBX1-203ENST00000402583 PLEKHD1A6NEE1 506 aa13.25□□□□□ -0.29
CBX1-203ENST00000402583 YTHDC1Q96MU7 727 aaKnown RBP13.25□□□□□ -0.29
CBX1-203ENST00000402583 CFDP1Q9UEE9 299 aaPredicted RBP13.25□□□□□ -0.29
CBX1-203ENST00000402583 CAMSAP2Q08AD1 1489 aa13.23□□□□□ -0.29
CBX1-203ENST00000402583 KIF14Q15058 1648 aa13.22□□□□□ -0.29
CBX1-203ENST00000402583 GPATCH8Q9UKJ3 1502 aaKnown RBP13.22□□□□□ -0.29
CBX1-203ENST00000402583 MPHOSPH9Q99550 1183 aa13.21□□□□□ -0.29
CBX1-203ENST00000402583 PTPRGP23470 1445 aa13.21□□□□□ -0.3
CBX1-203ENST00000402583 ATP10BO94823 1461 aa13.19□□□□□ -0.3
CBX1-203ENST00000402583 ADGRL2O95490 1459 aa13.19□□□□□ -0.3
CBX1-203ENST00000402583 GTF3C3Q9Y5Q9 886 aa13.19□□□□□ -0.3
CBX1-203ENST00000402583 ADGBQ8N7X0 1667 aa13.18□□□□□ -0.3
CBX1-203ENST00000402583 ANKRD30AQ9BXX3 1397 aa13.18□□□□□ -0.3
CBX1-203ENST00000402583 KDM6BO15054 1643 aa13.17□□□□□ -0.3
CBX1-203ENST00000402583 ZNF644Q9H582 1327 aaPredicted RBP13.17□□□□□ -0.3
CBX1-203ENST00000402583 SHANK2Q9UPX8 1470 aa13.16□□□□□ -0.3
CBX1-203ENST00000402583 ABCC10Q5T3U5 1492 aa13.16□□□□□ -0.3
CBX1-203ENST00000402583 NCOA1Q15788 1441 aa13.15□□□□□ -0.3
CBX1-203ENST00000402583 ZNF777Q9ULD5 760 aaPredicted RBP13.15□□□□□ -0.3
CBX1-203ENST00000402583 DENND4BO75064 1496 aaPredicted RBP13.15□□□□□ -0.3
CBX1-203ENST00000402583 SHROOM2Q13796 1616 aa13.14□□□□□ -0.31
CBX1-203ENST00000402583 SPINK5Q9NQ38 1064 aaPredicted RBP13.14□□□□□ -0.31
CBX1-203ENST00000402583 CROCC2H7BZ55 1655 aa13.14□□□□□ -0.31
CBX1-203ENST00000402583 CHD1O14646 1710 aa13.13□□□□□ -0.31
CBX1-203ENST00000402583 ANKRD30BQ9BXX2 1392 aa13.12□□□□□ -0.31
CBX1-203ENST00000402583 DDX10Q13206 875 aaKnown RBP13.12□□□□□ -0.31
CBX1-203ENST00000402583 KDM5BQ9UGL1 1544 aa13.12□□□□□ -0.31
CBX1-203ENST00000402583 RPRD2Q5VT52 1461 aaKnown RBP13.11□□□□□ -0.31
CBX1-203ENST00000402583 TSPY4P0CV99 314 aa13.11□□□□□ -0.31
CBX1-203ENST00000402583 TSPY10P0CW01 314 aa13.11□□□□□ -0.31
CBX1-203ENST00000402583 RSPH4AQ5TD94 716 aa13.11□□□□□ -0.31
CBX1-203ENST00000402583 ZNF219Q9P2Y4 722 aaPredicted RBP13.11□□□□□ -0.31
CBX1-203ENST00000402583 ANP32CO43423 234 aa13.1□□□□□ -0.31
CBX1-203ENST00000402583 ARHGEF5Q12774 1597 aa13.1□□□□□ -0.31
CBX1-203ENST00000402583 CCER2I3L3R5 266 aa13.09□□□□□ -0.31
CBX1-203ENST00000402583 CDC42BPAQ5VT25 1732 aa13.09□□□□□ -0.31
CBX1-203ENST00000402583 C9orf84Q5VXU9 1444 aa13.09□□□□□ -0.31
CBX1-203ENST00000402583 ANKRD50Q9ULJ7 1429 aa13.08□□□□□ -0.32
CBX1-203ENST00000402583 CAPN15O75808 1086 aa13.08□□□□□ -0.32
CBX1-203ENST00000402583 KIAA1107Q9UPP5 1409 aa13.07□□□□□ -0.32
CBX1-203ENST00000402583 EIF4G2P78344 907 aaKnown RBP eCLIP13.07□□□□□ -0.32
CBX1-203ENST00000402583 PZPP20742 1482 aa13.07□□□□□ -0.32
CBX1-203ENST00000402583 ABCC2Q92887 1545 aa13.07□□□□□ -0.32
CBX1-203ENST00000402583 TRHP20396 242 aaPredicted RBP13.06□□□□□ -0.32
CBX1-203ENST00000402583 PELP1Q8IZL8 1130 aaKnown RBP13.06□□□□□ -0.32
CBX1-203ENST00000402583 L3MBTL2Q969R5 705 aa13.06□□□□□ -0.32
CBX1-203ENST00000402583 CCDC141Q6ZP82 1450 aa13.05□□□□□ -0.32
CBX1-203ENST00000402583 PREX2Q70Z35 1606 aa13.05□□□□□ -0.32
CBX1-203ENST00000402583 PLEKHH2Q8IVE3 1493 aa13.04□□□□□ -0.32
CBX1-203ENST00000402583 TEX14Q8IWB6 1497 aa13.04□□□□□ -0.32
CBX1-203ENST00000402583 KDM5DQ9BY66 1539 aa13.03□□□□□ -0.32
CBX1-203ENST00000402583 HIRIP3Q9BW71 556 aaPredicted RBP13.03□□□□□ -0.32
CBX1-203ENST00000402583 UHRF1BP1LA0JNW5 1464 aa13.03□□□□□ -0.32
CBX1-203ENST00000402583 CLASP1Q7Z460 1538 aa13.03□□□□□ -0.32
CBX1-203ENST00000402583 HSPA5P11021 654 aaKnown RBP13.02□□□□□ -0.33
CBX1-203ENST00000402583 KIF15Q9NS87 1388 aa13.02□□□□□ -0.33
CBX1-203ENST00000402583 MBD5Q9P267 1494 aa13.02□□□□□ -0.33
CBX1-203ENST00000402583 NUP155O75694 1391 aa13.01□□□□□ -0.33
CBX1-203ENST00000402583 SAMD9LQ8IVG5 1584 aa13□□□□□ -0.33
CBX1-203ENST00000402583 MAST1Q9Y2H9 1570 aa13□□□□□ -0.33
CBX1-203ENST00000402583 ARHGAP5Q13017 1502 aa13□□□□□ -0.33
CBX1-203ENST00000402583 PKD2Q13563 968 aa13□□□□□ -0.33
CBX1-203ENST00000402583 HNRNPMP52272 730 aaKnown RBP eCLIP12.99□□□□□ -0.33
CBX1-203ENST00000402583 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.98□□□□□ -0.331e-6■□□□□ 10.3
CBX1-203ENST00000402583 CDC42BPBQ9Y5S2 1711 aa12.97□□□□□ -0.33
CBX1-203ENST00000402583 TTC37Q6PGP7 1564 aa12.96□□□□□ -0.33
CBX1-203ENST00000402583 MYO5CQ9NQX4 1742 aa12.96□□□□□ -0.34
CBX1-203ENST00000402583 ERCC6L2Q5T890 1561 aa12.95□□□□□ -0.34
CBX1-203ENST00000402583 WASHC2AQ641Q2 1341 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms