RNA–Protein interactions for RNA: ENST00000401642.7

SCFD2-202, Transcript of sec1 family domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCFD2, Length 3,176 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2-202ENST00000401642 KDM6BO15054 1643 aa15.4■□□□□ 0.06
SCFD2-202ENST00000401642 PRG4Q92954 1404 aaPredicted RBP15.4■□□□□ 0.06
SCFD2-202ENST00000401642 MRC2Q9UBG0 1479 aa15.4■□□□□ 0.06
SCFD2-202ENST00000401642 UGGT2Q9NYU1 1516 aa15.39■□□□□ 0.05
SCFD2-202ENST00000401642 CCER2I3L3R5 266 aa15.39■□□□□ 0.05
SCFD2-202ENST00000401642 JPH4Q96JJ6 628 aa15.37■□□□□ 0.05
SCFD2-202ENST00000401642 MRS2Q9HD23 443 aa15.37■□□□□ 0.05
SCFD2-202ENST00000401642 PKD2Q13563 968 aa15.35■□□□□ 0.05
SCFD2-202ENST00000401642 PLB1Q6P1J6 1458 aa15.35■□□□□ 0.05
SCFD2-202ENST00000401642 HECW1Q76N89 1606 aa15.34■□□□□ 0.05
SCFD2-202ENST00000401642 PLEKHD1A6NEE1 506 aa15.33■□□□□ 0.04
SCFD2-202ENST00000401642 HNRNPMP52272 730 aaKnown RBP eCLIP15.32■□□□□ 0.049e-8■■■■□ 23.6
SCFD2-202ENST00000401642 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.32■□□□□ 0.04
SCFD2-202ENST00000401642 PBRM1Q86U86 1689 aa15.32■□□□□ 0.04
SCFD2-202ENST00000401642 DENND4BO75064 1496 aaPredicted RBP15.32■□□□□ 0.04
SCFD2-202ENST00000401642 ADAMTS12P58397 1594 aa15.31■□□□□ 0.04
SCFD2-202ENST00000401642 ABCC5O15440 1437 aa15.31■□□□□ 0.04
SCFD2-202ENST00000401642 DAPK1P53355 1430 aa15.31■□□□□ 0.04
SCFD2-202ENST00000401642 NUP153P49790 1475 aaKnown RBP15.29■□□□□ 0.04
SCFD2-202ENST00000401642 RGL3Q3MIN7 710 aa15.29■□□□□ 0.04
SCFD2-202ENST00000401642 WDR62O43379 1518 aa15.28■□□□□ 0.04
SCFD2-202ENST00000401642 IFT140Q96RY7 1462 aa15.28■□□□□ 0.04
SCFD2-202ENST00000401642 DISP1Q96F81 1524 aa15.28■□□□□ 0.04
SCFD2-202ENST00000401642 ANP32EQ9BTT0 268 aa15.28■□□□□ 0.04
SCFD2-202ENST00000401642 KIAA0586Q9BVV6 1533 aa15.27■□□□□ 0.04
SCFD2-202ENST00000401642 SALL2Q9Y467 1007 aaPredicted RBP15.27■□□□□ 0.03
SCFD2-202ENST00000401642 GRIN2AQ12879 1464 aa15.27■□□□□ 0.03
SCFD2-202ENST00000401642 TSPY4P0CV99 314 aa15.26■□□□□ 0.03
SCFD2-202ENST00000401642 TSPY10P0CW01 314 aa15.26■□□□□ 0.03
SCFD2-202ENST00000401642 MIA2Q96PC5 1412 aa15.26■□□□□ 0.03
SCFD2-202ENST00000401642 PRKRIP1Q9H875 184 aaPredicted RBP15.26■□□□□ 0.03
SCFD2-202ENST00000401642 KIF7Q2M1P5 1343 aa15.26■□□□□ 0.03
SCFD2-202ENST00000401642 ANKRD30BQ9BXX2 1392 aa15.25■□□□□ 0.03
SCFD2-202ENST00000401642 ARHGEF11O15085 1522 aa15.24■□□□□ 0.03
SCFD2-202ENST00000401642 TCOF1Q13428 1488 aaKnown RBP15.24■□□□□ 0.03
SCFD2-202ENST00000401642 NUP155O75694 1391 aa15.24■□□□□ 0.03
SCFD2-202ENST00000401642 CCDC7Q96M83 1385 aa15.24■□□□□ 0.03
SCFD2-202ENST00000401642 KDM5BQ9UGL1 1544 aa15.23■□□□□ 0.03
SCFD2-202ENST00000401642 DCAF11Q8TEB1 546 aa15.23■□□□□ 0.03
SCFD2-202ENST00000401642 CARD11Q9BXL7 1154 aa15.22■□□□□ 0.03
SCFD2-202ENST00000401642 KIAA0556O60303 1618 aa15.2■□□□□ 0.02
SCFD2-202ENST00000401642 TROQ12816 1431 aaPredicted RBP15.2■□□□□ 0.02
SCFD2-202ENST00000401642 B4GALNT3Q6L9W6 998 aa15.19■□□□□ 0.02
SCFD2-202ENST00000401642 RBM19Q9Y4C8 960 aaKnown RBP15.19■□□□□ 0.02
SCFD2-202ENST00000401642 EIF4G3O43432 1585 aaKnown RBP15.19■□□□□ 0.02
SCFD2-202ENST00000401642 CARMIL2Q6F5E8 1435 aa15.18■□□□□ 0.02
SCFD2-202ENST00000401642 CAMSAP2Q08AD1 1489 aa15.18■□□□□ 0.02
SCFD2-202ENST00000401642 CNTLNQ9NXG0 1405 aa15.18■□□□□ 0.02
SCFD2-202ENST00000401642 ERICH6Q7L0X2 663 aa15.18■□□□□ 0.02
SCFD2-202ENST00000401642 ANKRD30AQ9BXX3 1397 aa15.17■□□□□ 0.02
SCFD2-202ENST00000401642 NCOA1Q15788 1441 aa15.17■□□□□ 0.02
SCFD2-202ENST00000401642 GPATCH8Q9UKJ3 1502 aaKnown RBP15.16■□□□□ 0.02
SCFD2-202ENST00000401642 RAPGEF6Q8TEU7 1601 aa15.16■□□□□ 0.02
SCFD2-202ENST00000401642 ST20-MTHFSA0A0A6YYL1 179 aa15.16■□□□□ 0.02
SCFD2-202ENST00000401642 AKNAQ7Z591 1439 aa15.16■□□□□ 0.02
SCFD2-202ENST00000401642 MYT1LQ9UL68 1186 aa15.15■□□□□ 0.02
SCFD2-202ENST00000401642 RPRD2Q5VT52 1461 aaKnown RBP15.15■□□□□ 0.02
SCFD2-202ENST00000401642 USP47Q96K76 1375 aa15.15■□□□□ 0.02
SCFD2-202ENST00000401642 KIF14Q15058 1648 aa15.15■□□□□ 0.02
SCFD2-202ENST00000401642 ANKRD50Q9ULJ7 1429 aa15.14■□□□□ 0.01
SCFD2-202ENST00000401642 ROCK1Q13464 1354 aa15.14■□□□□ 0.01
SCFD2-202ENST00000401642 TMC1Q8TDI8 760 aa15.13■□□□□ 0.01
SCFD2-202ENST00000401642 CEP170Q5SW79 1584 aa15.12■□□□□ 0.01
SCFD2-202ENST00000401642 GCC2Q8IWJ2 1684 aa15.12■□□□□ 0.01
SCFD2-202ENST00000401642 SYNJ2O15056 1496 aa15.11■□□□□ 0.01
SCFD2-202ENST00000401642 PZPP20742 1482 aa15.11■□□□□ 0.01
SCFD2-202ENST00000401642 PTPRGP23470 1445 aa15.1■□□□□ 0.01
SCFD2-202ENST00000401642 KIF15Q9NS87 1388 aa15.09■□□□□ 0.01
SCFD2-202ENST00000401642 KIAA1107Q9UPP5 1409 aa15.09■□□□□ 0.01
SCFD2-202ENST00000401642 DNMT1P26358 1616 aaKnown RBP15.09■□□□□ 0.01
SCFD2-202ENST00000401642 TEX14Q8IWB6 1497 aa15.09■□□□□ 0.01
SCFD2-202ENST00000401642 NBPF1Q3BBV0 1214 aa15.08■□□□□ 0
SCFD2-202ENST00000401642 C9orf84Q5VXU9 1444 aa15.08■□□□□ 0
SCFD2-202ENST00000401642 ATP10BO94823 1461 aa15.07■□□□□ 0
SCFD2-202ENST00000401642 MAGI1Q96QZ7 1491 aaPredicted RBP15.06■□□□□ 0
SCFD2-202ENST00000401642 CC2D1BQ5T0F9 858 aaKnown RBP15.06■□□□□ 0
SCFD2-202ENST00000401642 ROCK2O75116 1388 aaKnown RBP15.03■□□□□ -0
SCFD2-202ENST00000401642 SENP3Q9H4L4 574 aaPredicted RBP15.03■□□□□ -0
SCFD2-202ENST00000401642 SPATA31E1Q6ZUB1 1445 aa15.01□□□□□ -0.01
SCFD2-202ENST00000401642 PPP4R2Q9NY27 417 aa15.01□□□□□ -0.01
SCFD2-202ENST00000401642 ZBED9Q6R2W3 1325 aa15.01□□□□□ -0.01
SCFD2-202ENST00000401642 NUP160Q12769 1436 aa14.98□□□□□ -0.01
SCFD2-202ENST00000401642 CCDC136Q96JN2 1154 aa14.96□□□□□ -0.01
SCFD2-202ENST00000401642 DHX29Q7Z478 1369 aaKnown RBP14.96□□□□□ -0.01
SCFD2-202ENST00000401642 MSH5O43196 834 aa14.95□□□□□ -0.02
SCFD2-202ENST00000401642 AFAP1Q8N556 730 aa14.95□□□□□ -0.02
SCFD2-202ENST00000401642 PNISRQ8TF01 805 aaKnown RBP14.94□□□□□ -0.02
SCFD2-202ENST00000401642 CCDC144AA2RUR9 1427 aa14.94□□□□□ -0.02
SCFD2-202ENST00000401642 SLC24A1O60721 1099 aa14.93□□□□□ -0.02
SCFD2-202ENST00000401642 ARHGAP5Q13017 1502 aa14.92□□□□□ -0.02
SCFD2-202ENST00000401642 NUDCQ9Y266 331 aa14.92□□□□□ -0.02
SCFD2-202ENST00000401642 BCORL1Q5H9F3 1711 aa14.92□□□□□ -0.02
SCFD2-202ENST00000401642 ITSN2Q9NZM3 1697 aa14.91□□□□□ -0.02
SCFD2-202ENST00000401642 ABCC10Q5T3U5 1492 aa14.91□□□□□ -0.02
SCFD2-202ENST00000401642 PANK3Q9H999 370 aa14.9□□□□□ -0.02
SCFD2-202ENST00000401642 CDCA7LQ96GN5 454 aa14.89□□□□□ -0.03
SCFD2-202ENST00000401642 PLEKHH2Q8IVE3 1493 aa14.89□□□□□ -0.03
SCFD2-202ENST00000401642 CHGAP10645 457 aaKnown RBP14.89□□□□□ -0.03
SCFD2-202ENST00000401642 ADGRL2O95490 1459 aa14.89□□□□□ -0.03
SCFD2-202ENST00000401642 ANO8Q9HCE9 1232 aaPredicted RBP14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms