RNA–Protein interactions for RNA: ENST00000400227.7

CSNK2A1-204, Transcript of casein kinase 2 alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CSNK2A1, Length 1,499 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2A1-204ENST00000400227 MAMSTRQ6ZN01 415 aa12.83□□□□□ -0.36
CSNK2A1-204ENST00000400227 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.82□□□□□ -0.36
CSNK2A1-204ENST00000400227 CRISPLD2Q9H0B8 497 aa12.8□□□□□ -0.36
CSNK2A1-204ENST00000400227 SCUBE2Q9NQ36 999 aa12.8□□□□□ -0.36
CSNK2A1-204ENST00000400227 NCKAP5LQ9HCH0 1330 aa12.8□□□□□ -0.36
CSNK2A1-204ENST00000400227 VSIG10Q8N0Z9 540 aa12.79□□□□□ -0.36
CSNK2A1-204ENST00000400227 TMEM92Q6UXU6 159 aa12.78□□□□□ -0.36
CSNK2A1-204ENST00000400227 PDE4AP27815 886 aa12.78□□□□□ -0.36
CSNK2A1-204ENST00000400227 TMC2Q8TDI7 906 aa12.77□□□□□ -0.37
CSNK2A1-204ENST00000400227 GPHNQ9NQX3 736 aaPredicted RBP12.77□□□□□ -0.37
CSNK2A1-204ENST00000400227 KIF3CO14782 793 aa12.76□□□□□ -0.37
CSNK2A1-204ENST00000400227 KDM2AQ9Y2K7 1162 aa12.76□□□□□ -0.37
CSNK2A1-204ENST00000400227 C2orf72A6NCS6 295 aa12.74□□□□□ -0.37
CSNK2A1-204ENST00000400227 OTUD5Q96G74 571 aa12.73□□□□□ -0.37
CSNK2A1-204ENST00000400227 LARP6Q9BRS8 491 aaKnown RBP12.73□□□□□ -0.37
CSNK2A1-204ENST00000400227 MFSD10Q14728 455 aa12.72□□□□□ -0.37
CSNK2A1-204ENST00000400227 SLAIN1Q8ND83 568 aa12.7□□□□□ -0.38
CSNK2A1-204ENST00000400227 DDX27Q96GQ7 796 aaKnown RBP12.7□□□□□ -0.38
CSNK2A1-204ENST00000400227 FOXK1P85037 733 aa12.69□□□□□ -0.38
CSNK2A1-204ENST00000400227 WDR70Q9NW82 654 aa12.68□□□□□ -0.38
CSNK2A1-204ENST00000400227 DSG2Q14126 1118 aa12.67□□□□□ -0.38
CSNK2A1-204ENST00000400227 PPP1R15BQ5SWA1 713 aa12.66□□□□□ -0.38
CSNK2A1-204ENST00000400227 PLPP6Q8IY26 295 aa12.63□□□□□ -0.39
CSNK2A1-204ENST00000400227 CAMK2BQ13554 666 aa12.58□□□□□ -0.4
CSNK2A1-204ENST00000400227 E2F4Q16254 413 aa12.58□□□□□ -0.4
CSNK2A1-204ENST00000400227 POTEMA6NI47 508 aa12.53□□□□□ -0.4
CSNK2A1-204ENST00000400227 SLC34A2O95436 690 aa12.53□□□□□ -0.4
CSNK2A1-204ENST00000400227 P3H3Q8IVL6 736 aa12.53□□□□□ -0.4
CSNK2A1-204ENST00000400227 HOXB3P14651 431 aaPredicted RBP12.52□□□□□ -0.41
CSNK2A1-204ENST00000400227 KCNV2Q8TDN2 545 aa12.52□□□□□ -0.41
CSNK2A1-204ENST00000400227 SNPHO15079 494 aa12.51□□□□□ -0.41
CSNK2A1-204ENST00000400227 DOK7Q18PE1 504 aa12.51□□□□□ -0.41
CSNK2A1-204ENST00000400227 EMILIN3Q9NT22 766 aa12.51□□□□□ -0.41
CSNK2A1-204ENST00000400227 OXER1Q8TDS5 423 aa12.47□□□□□ -0.41
CSNK2A1-204ENST00000400227 PTCD2Q8WV60 388 aaKnown RBP12.47□□□□□ -0.41
CSNK2A1-204ENST00000400227 ARIH1Q9Y4X5 557 aaPredicted RBP12.47□□□□□ -0.41
CSNK2A1-204ENST00000400227 PCDH10Q9P2E7 1040 aa12.46□□□□□ -0.41
CSNK2A1-204ENST00000400227 ARHGEF1Q92888 912 aaKnown RBP12.46□□□□□ -0.42
CSNK2A1-204ENST00000400227 RIMBP2O15034 1052 aa12.45□□□□□ -0.42
CSNK2A1-204ENST00000400227 POTEGQ6S5H5 508 aa12.45□□□□□ -0.42
CSNK2A1-204ENST00000400227 UPF1Q92900 1129 aaKnown RBP eCLIP12.45□□□□□ -0.428e-9■■■■□ 21.4
CSNK2A1-204ENST00000400227 ZSWIM6Q9HCJ5 1215 aa12.44□□□□□ -0.42
CSNK2A1-204ENST00000400227 ZNF710Q8N1W2 664 aa12.43□□□□□ -0.42
CSNK2A1-204ENST00000400227 DPYSL4O14531 572 aa12.42□□□□□ -0.42
CSNK2A1-204ENST00000400227 TBC1D12O60347 775 aa12.42□□□□□ -0.42
CSNK2A1-204ENST00000400227 PCDHGA4Q9Y5G9 962 aa12.42□□□□□ -0.42
CSNK2A1-204ENST00000400227 MAP3K9P80192 1104 aa12.4□□□□□ -0.42
CSNK2A1-204ENST00000400227 GPR153Q6NV75 609 aa12.39□□□□□ -0.43
CSNK2A1-204ENST00000400227 ARSIQ5FYB1 569 aa12.37□□□□□ -0.43
CSNK2A1-204ENST00000400227 PDIA6Q15084 440 aa12.35□□□□□ -0.43
CSNK2A1-204ENST00000400227 SPDYE16A6NNV3 312 aaPredicted RBP12.34□□□□□ -0.43
CSNK2A1-204ENST00000400227 HOXB1P14653 301 aaPredicted RBP12.34□□□□□ -0.43
CSNK2A1-204ENST00000400227 KDM4FA0A1W2PPD8 638 aa12.34□□□□□ -0.43
CSNK2A1-204ENST00000400227 ST18O60284 1047 aa12.34□□□□□ -0.43
CSNK2A1-204ENST00000400227 EVI5O60447 810 aa12.34□□□□□ -0.43
CSNK2A1-204ENST00000400227 KHSRPQ92945 711 aaKnown RBP eCLIP12.34□□□□□ -0.434e-6■■□□□ 13.5
CSNK2A1-204ENST00000400227 FAM163AQ96GL9 167 aaPredicted RBP12.33□□□□□ -0.44
CSNK2A1-204ENST00000400227 NUDT7P0C024 238 aa12.31□□□□□ -0.44
CSNK2A1-204ENST00000400227 ANO8Q9HCE9 1232 aaPredicted RBP12.31□□□□□ -0.44
CSNK2A1-204ENST00000400227 ZNF316A6NFI3 1004 aaPredicted RBP12.3□□□□□ -0.44
CSNK2A1-204ENST00000400227 NBR1Q14596 966 aa12.28□□□□□ -0.44
CSNK2A1-204ENST00000400227 LCE2DQ5TA82 110 aaPredicted RBP12.27□□□□□ -0.44
CSNK2A1-204ENST00000400227 SEMA3EO15041 775 aa12.26□□□□□ -0.45
CSNK2A1-204ENST00000400227 PTGER2P43116 358 aa12.25□□□□□ -0.45
CSNK2A1-204ENST00000400227 BCANQ96GW7 911 aa12.25□□□□□ -0.45
CSNK2A1-204ENST00000400227 TESPA1A2RU30 521 aaPredicted RBP12.22□□□□□ -0.45
CSNK2A1-204ENST00000400227 LHX6Q9UPM6 363 aa12.22□□□□□ -0.45
CSNK2A1-204ENST00000400227 EMP3P54852 163 aa12.21□□□□□ -0.46
CSNK2A1-204ENST00000400227 MARVELD3Q96A59 401 aa12.21□□□□□ -0.46
CSNK2A1-204ENST00000400227 MLLT3P42568 568 aaPredicted RBP12.2□□□□□ -0.46
CSNK2A1-204ENST00000400227 DDX12PQ92771 950 aa12.19□□□□□ -0.46
CSNK2A1-204ENST00000400227 JPH4Q96JJ6 628 aa12.18□□□□□ -0.46
CSNK2A1-204ENST00000400227 PSDA5PKW4 1024 aaPredicted RBP12.17□□□□□ -0.46
CSNK2A1-204ENST00000400227 GRXCR2A6NFK2 248 aa12.17□□□□□ -0.46
CSNK2A1-204ENST00000400227 PHF14O94880 888 aa12.17□□□□□ -0.46
CSNK2A1-204ENST00000400227 FOSBP53539 338 aa12.16□□□□□ -0.46
CSNK2A1-204ENST00000400227 ERBB3P21860 1342 aa12.16□□□□□ -0.46
CSNK2A1-204ENST00000400227 PCDHGA10Q9Y5H3 936 aa12.15□□□□□ -0.46
CSNK2A1-204ENST00000400227 SMYD5Q6GMV2 418 aa12.14□□□□□ -0.47
CSNK2A1-204ENST00000400227 ZNF454Q8N9F8 522 aa12.14□□□□□ -0.47
CSNK2A1-204ENST00000400227 EPAS1Q99814 870 aa12.14□□□□□ -0.47
CSNK2A1-204ENST00000400227 FAM205CA6NFA0 338 aa12.12□□□□□ -0.47
CSNK2A1-204ENST00000400227 OSBPP22059 807 aa12.12□□□□□ -0.47
CSNK2A1-204ENST00000400227 PPP4R3BQ5MIZ7 849 aa12.12□□□□□ -0.47
CSNK2A1-204ENST00000400227 VARS2Q5ST30 1063 aaKnown RBP12.12□□□□□ -0.47
CSNK2A1-204ENST00000400227 TYW1BQ6NUM6 668 aa12.11□□□□□ -0.47
CSNK2A1-204ENST00000400227 FBXW7Q969H0 707 aa12.11□□□□□ -0.47
CSNK2A1-204ENST00000400227 TULP1O00294 542 aaPredicted RBP12.1□□□□□ -0.47
CSNK2A1-204ENST00000400227 ZDHHC16Q969W1 377 aa12.1□□□□□ -0.47
CSNK2A1-204ENST00000400227 HS3ST6Q96QI5 342 aa12.08□□□□□ -0.47
CSNK2A1-204ENST00000400227 CCDC180Q9P1Z9 1646 aa12.08□□□□□ -0.48
CSNK2A1-204ENST00000400227 POTEB3A0JP26 581 aa12.08□□□□□ -0.48
CSNK2A1-204ENST00000400227 PRIM1P49642 420 aaKnown RBP12.08□□□□□ -0.48
CSNK2A1-204ENST00000400227 POTEBQ6S5H4 581 aa12.08□□□□□ -0.48
CSNK2A1-204ENST00000400227 EN1Q05925 392 aaPredicted RBP12.07□□□□□ -0.48
CSNK2A1-204ENST00000400227 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.06□□□□□ -0.48
CSNK2A1-204ENST00000400227 ADAM33Q9BZ11 813 aa12.06□□□□□ -0.48
CSNK2A1-204ENST00000400227 RBM33Q96EV2 1170 aaKnown RBP12.04□□□□□ -0.48
CSNK2A1-204ENST00000400227 BCL2L12Q9HB09 334 aa12.04□□□□□ -0.48
CSNK2A1-204ENST00000400227 RBM26Q5T8P6 1007 aaKnown RBP12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms