RNA–Protein interactions for RNA: ENST00000399655.5

CACNA1C-220, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 13,433 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-220ENST00000399655 CCDC175P0C221 793 aa10.71□□□□□ -0.69
CACNA1C-220ENST00000399655 PES1O00541 588 aaKnown RBP10.71□□□□□ -0.69
CACNA1C-220ENST00000399655 ANKRD18AQ8IVF6 992 aa10.71□□□□□ -0.7
CACNA1C-220ENST00000399655 LMOD2Q6P5Q4 547 aa10.71□□□□□ -0.7
CACNA1C-220ENST00000399655 CFAP57Q96MR6 1250 aa10.71□□□□□ -0.7
CACNA1C-220ENST00000399655 GON4LQ3T8J9 2241 aa10.71□□□□□ -0.7
CACNA1C-220ENST00000399655 CHMP4CQ96CF2 233 aa10.7□□□□□ -0.7
CACNA1C-220ENST00000399655 CFAP53Q96M91 514 aa10.7□□□□□ -0.7
CACNA1C-220ENST00000399655 KIF3AQ9Y496 699 aa10.7□□□□□ -0.7
CACNA1C-220ENST00000399655 SPATA24Q86W54 205 aa10.7□□□□□ -0.7
CACNA1C-220ENST00000399655 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.69□□□□□ -0.71e-7■■■■■ 115.4
CACNA1C-220ENST00000399655 RASSF8Q8NHQ8 419 aa10.69□□□□□ -0.7
CACNA1C-220ENST00000399655 TSPYL1Q9H0U9 437 aa10.69□□□□□ -0.7
CACNA1C-220ENST00000399655 VGFO15240 615 aaPredicted RBP10.69□□□□□ -0.7
CACNA1C-220ENST00000399655 ANO8Q9HCE9 1232 aaPredicted RBP10.69□□□□□ -0.7
CACNA1C-220ENST00000399655 EZRP15311 586 aaKnown RBP10.68□□□□□ -0.7
CACNA1C-220ENST00000399655 ERCC4Q92889 916 aaPredicted RBP10.68□□□□□ -0.7
CACNA1C-220ENST00000399655 CCDC173Q0VFZ6 552 aa10.68□□□□□ -0.7
CACNA1C-220ENST00000399655 TAF3Q5VWG9 929 aa10.67□□□□□ -0.7
CACNA1C-220ENST00000399655 CLASRPQ8N2M8 674 aaKnown RBP10.67□□□□□ -0.7
CACNA1C-220ENST00000399655 ANKRD20A12PQ8NF67 263 aa10.67□□□□□ -0.7
CACNA1C-220ENST00000399655 TAOK2Q9UL54 1235 aa10.67□□□□□ -0.7
CACNA1C-220ENST00000399655 TMX4Q9H1E5 349 aaPredicted RBP10.67□□□□□ -0.7
CACNA1C-220ENST00000399655 HMGB1P1B2RPK0 211 aaPredicted RBP10.66□□□□□ -0.7
CACNA1C-220ENST00000399655 CHMP3Q9Y3E7 222 aa10.66□□□□□ -0.7
CACNA1C-220ENST00000399655 HSP90AB3PQ58FF7 597 aa10.65□□□□□ -0.7
CACNA1C-220ENST00000399655 VSIG10Q8N0Z9 540 aa10.65□□□□□ -0.7
CACNA1C-220ENST00000399655 DEKP35659 375 aaKnown RBP10.65□□□□□ -0.7
CACNA1C-220ENST00000399655 FYB1O15117 783 aa10.65□□□□□ -0.7
CACNA1C-220ENST00000399655 TPD52L1Q16890 204 aaPredicted RBP10.65□□□□□ -0.7
CACNA1C-220ENST00000399655 ODF2Q5BJF6 829 aa10.65□□□□□ -0.71
CACNA1C-220ENST00000399655 CCAR2Q8N163 923 aaKnown RBP10.65□□□□□ -0.71
CACNA1C-220ENST00000399655 KIF16BQ96L93 1317 aa10.64□□□□□ -0.71
CACNA1C-220ENST00000399655 MRS2Q9HD23 443 aa10.64□□□□□ -0.71
CACNA1C-220ENST00000399655 PPM1EQ8WY54 764 aa10.63□□□□□ -0.71
CACNA1C-220ENST00000399655 NF2P35240 595 aa10.63□□□□□ -0.71
CACNA1C-220ENST00000399655 GPATCH3Q96I76 525 aa10.62□□□□□ -0.71
CACNA1C-220ENST00000399655 PLCD4Q9BRC7 762 aa10.62□□□□□ -0.71
CACNA1C-220ENST00000399655 DEF6Q9H4E7 631 aa10.62□□□□□ -0.71
CACNA1C-220ENST00000399655 GOLGA6L19H0YKK7 550 aa10.62□□□□□ -0.71
CACNA1C-220ENST00000399655 KAT6BQ8WYB5 2073 aa10.62□□□□□ -0.71
CACNA1C-220ENST00000399655 CDCA8Q53HL2 280 aa10.62□□□□□ -0.71
CACNA1C-220ENST00000399655 CCDC112Q8NEF3 446 aa10.61□□□□□ -0.71
CACNA1C-220ENST00000399655 TCEAL9Q9UHQ7 104 aa10.61□□□□□ -0.71
CACNA1C-220ENST00000399655 HOOK1Q9UJC3 728 aaKnown RBP10.61□□□□□ -0.71
CACNA1C-220ENST00000399655 LEKR1Q6ZMV7 388 aa10.61□□□□□ -0.71
CACNA1C-220ENST00000399655 GIMAP7Q8NHV1 300 aa10.61□□□□□ -0.71
CACNA1C-220ENST00000399655 PODXL2Q9NZ53 605 aa10.61□□□□□ -0.71
CACNA1C-220ENST00000399655 RALBP1Q15311 655 aa10.6□□□□□ -0.71
CACNA1C-220ENST00000399655 SALL2Q9Y467 1007 aaPredicted RBP10.6□□□□□ -0.71
CACNA1C-220ENST00000399655 KIAA0754O94854 1291 aa10.6□□□□□ -0.71
CACNA1C-220ENST00000399655 CT47A1Q5JQC4 288 aaPredicted RBP10.59□□□□□ -0.71
CACNA1C-220ENST00000399655 SUPT16HQ9Y5B9 1047 aaKnown RBP10.59□□□□□ -0.71
CACNA1C-220ENST00000399655 CHMP4AQ9BY43 222 aa10.59□□□□□ -0.71
CACNA1C-220ENST00000399655 ATP6V1DQ9Y5K8 247 aa10.59□□□□□ -0.71
CACNA1C-220ENST00000399655 KIF3BO15066 747 aa10.59□□□□□ -0.71
CACNA1C-220ENST00000399655 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.59□□□□□ -0.71
CACNA1C-220ENST00000399655 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.58□□□□□ -0.72
CACNA1C-220ENST00000399655 MAPK8IP3Q9UPT6 1336 aa10.58□□□□□ -0.72
CACNA1C-220ENST00000399655 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.58□□□□□ -0.72
CACNA1C-220ENST00000399655 DDX11L8A8MPP1 907 aa10.58□□□□□ -0.72
CACNA1C-220ENST00000399655 GOLGA6L10A6NI86 522 aa10.57□□□□□ -0.72
CACNA1C-220ENST00000399655 CREBRFQ8IUR6 639 aa10.57□□□□□ -0.72
CACNA1C-220ENST00000399655 ERLIN2O94905 339 aa10.57□□□□□ -0.72
CACNA1C-220ENST00000399655 CCAR1Q8IX12 1150 aaKnown RBP10.57□□□□□ -0.72
CACNA1C-220ENST00000399655 CCDC47Q96A33 483 aaKnown RBP10.56□□□□□ -0.72
CACNA1C-220ENST00000399655 SETSIPP0DME0 302 aa10.56□□□□□ -0.72
CACNA1C-220ENST00000399655 HDAC5Q9UQL6 1122 aa10.56□□□□□ -0.72
CACNA1C-220ENST00000399655 SEPT7Q16181 437 aaKnown RBP10.55□□□□□ -0.72
CACNA1C-220ENST00000399655 RABEP1Q15276 862 aa10.55□□□□□ -0.72
CACNA1C-220ENST00000399655 CLGNO14967 610 aa10.55□□□□□ -0.72
CACNA1C-220ENST00000399655 C14orf37Q86TY3 774 aa10.55□□□□□ -0.72
CACNA1C-220ENST00000399655 MARCH6O60337 910 aa10.55□□□□□ -0.72
CACNA1C-220ENST00000399655 SHTN1A0MZ66 631 aa10.55□□□□□ -0.72
CACNA1C-220ENST00000399655 CHGAP10645 457 aaKnown RBP10.54□□□□□ -0.72
CACNA1C-220ENST00000399655 TCERG1O14776 1098 aaKnown RBP10.54□□□□□ -0.72
CACNA1C-220ENST00000399655 EIF3JO75822 258 aaKnown RBP10.54□□□□□ -0.72
CACNA1C-220ENST00000399655 STAMBPO95630 424 aa10.54□□□□□ -0.72
CACNA1C-220ENST00000399655 PDCL3Q9H2J4 239 aa10.54□□□□□ -0.72
CACNA1C-220ENST00000399655 HOMER1Q86YM7 354 aa10.53□□□□□ -0.72
CACNA1C-220ENST00000399655 CCP110O43303 1012 aa10.53□□□□□ -0.72
CACNA1C-220ENST00000399655 DIAPH3Q9NSV4 1193 aa10.53□□□□□ -0.72
CACNA1C-220ENST00000399655 BECN2A8MW95 431 aa10.53□□□□□ -0.72
CACNA1C-220ENST00000399655 NUDCQ9Y266 331 aa10.53□□□□□ -0.72
CACNA1C-220ENST00000399655 SEPT6Q14141 434 aa10.52□□□□□ -0.72
CACNA1C-220ENST00000399655 VPS53Q5VIR6 699 aa10.52□□□□□ -0.72
CACNA1C-220ENST00000399655 HMGB3O15347 200 aaKnown RBP10.52□□□□□ -0.73
CACNA1C-220ENST00000399655 DDX23Q9BUQ8 820 aaKnown RBP10.52□□□□□ -0.73
CACNA1C-220ENST00000399655 HSP90AB2PQ58FF8 381 aa10.52□□□□□ -0.73
CACNA1C-220ENST00000399655 SKOR2Q2VWA4 1001 aaPredicted RBP10.52□□□□□ -0.73
CACNA1C-220ENST00000399655 GBP2P32456 591 aaPredicted RBP10.51□□□□□ -0.73
CACNA1C-220ENST00000399655 ZBTB7CA1YPR0 619 aa10.51□□□□□ -0.73
CACNA1C-220ENST00000399655 GOLGA6L10A0A0M3HER8 536 aa10.51□□□□□ -0.73
CACNA1C-220ENST00000399655 CEP63Q96MT8 703 aa10.51□□□□□ -0.73
CACNA1C-220ENST00000399655 SF3A1Q15459 793 aaKnown RBP10.51□□□□□ -0.73
CACNA1C-220ENST00000399655 FAM114A1Q8IWE2 563 aa10.5□□□□□ -0.73
CACNA1C-220ENST00000399655 SLC26A8Q96RN1 970 aa10.5□□□□□ -0.73
CACNA1C-220ENST00000399655 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.5□□□□□ -0.73
CACNA1C-220ENST00000399655 V9GYY5 206 aaPredicted RBP10.5□□□□□ -0.73
CACNA1C-220ENST00000399655 GRIPAP1Q4V328 841 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 89.6 ms