RNA–Protein interactions for RNA: ENST00000398989.2

TUBA4A-203, Transcript of tubulin alpha 4a, humanhuman

TSL 3

Gene TUBA4A, Length 615 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA4A-203ENST00000398989 CDC42BPAQ5VT25 1732 aa22.23■■□□□ 1.15
TUBA4A-203ENST00000398989 EFCAB2Q5VUJ9 269 aa22.23■■□□□ 1.15
TUBA4A-203ENST00000398989 MTUS2Q5JR59 1369 aa22.22■■□□□ 1.15
TUBA4A-203ENST00000398989 SCAPERQ9BY12 1400 aa22.2■■□□□ 1.14
TUBA4A-203ENST00000398989 EHBP1L1Q8N3D4 1523 aa22.19■■□□□ 1.14
TUBA4A-203ENST00000398989 KDM4FA0A1W2PPD8 638 aa22.18■■□□□ 1.14
TUBA4A-203ENST00000398989 TIAM1Q13009 1591 aa22.16■■□□□ 1.14
TUBA4A-203ENST00000398989 POGZQ7Z3K3 1410 aa22.16■■□□□ 1.14
TUBA4A-203ENST00000398989 ZMYM4Q5VZL5 1548 aa22.16■■□□□ 1.14
TUBA4A-203ENST00000398989 ARHGEF40Q8TER5 1519 aa22.15■■□□□ 1.14
TUBA4A-203ENST00000398989 GPATCH8Q9UKJ3 1502 aaKnown RBP22.13■■□□□ 1.13
TUBA4A-203ENST00000398989 CCNB3Q8WWL7 1395 aa22.12■■□□□ 1.13
TUBA4A-203ENST00000398989 ABCC1P33527 1531 aa22.11■■□□□ 1.13
TUBA4A-203ENST00000398989 ZFYVE16Q7Z3T8 1539 aa22.11■■□□□ 1.13
TUBA4A-203ENST00000398989 ITSN2Q9NZM3 1697 aa22.11■■□□□ 1.13
TUBA4A-203ENST00000398989 ZNF518AQ6AHZ1 1483 aa22.09■■□□□ 1.13
TUBA4A-203ENST00000398989 SUPT6HQ7KZ85 1726 aaKnown RBP22.09■■□□□ 1.13
TUBA4A-203ENST00000398989 MAGI2Q86UL8 1455 aa22.09■■□□□ 1.13
TUBA4A-203ENST00000398989 SAMD9LQ8IVG5 1584 aa22.08■■□□□ 1.13
TUBA4A-203ENST00000398989 ZNF777Q9ULD5 760 aaPredicted RBP22.08■■□□□ 1.13
TUBA4A-203ENST00000398989 YEATS2Q9ULM3 1422 aa22.07■■□□□ 1.12
TUBA4A-203ENST00000398989 KDM5CP41229 1560 aa22.07■■□□□ 1.12
TUBA4A-203ENST00000398989 ARHGEF12Q9NZN5 1544 aa22.06■■□□□ 1.12
TUBA4A-203ENST00000398989 LRRC9Q6ZRR7 1453 aa22.05■■□□□ 1.12
TUBA4A-203ENST00000398989 AFAP1Q8N556 730 aa22.05■■□□□ 1.12
TUBA4A-203ENST00000398989 CFDP1Q9UEE9 299 aaPredicted RBP22.05■■□□□ 1.12
TUBA4A-203ENST00000398989 MAP3K1Q13233 1512 aa22.05■■□□□ 1.12
TUBA4A-203ENST00000398989 HECW2Q9P2P5 1572 aa22.04■■□□□ 1.12
TUBA4A-203ENST00000398989 NCOA2Q15596 1464 aa22.03■■□□□ 1.12
TUBA4A-203ENST00000398989 SYCP2Q9BX26 1530 aa22.03■■□□□ 1.12
TUBA4A-203ENST00000398989 TRAPPC8Q9Y2L5 1435 aa22.03■■□□□ 1.12
TUBA4A-203ENST00000398989 ARID4BQ4LE39 1312 aaPredicted RBP22.03■■□□□ 1.12
TUBA4A-203ENST00000398989 SIGLEC1Q9BZZ2 1709 aa22.01■■□□□ 1.11
TUBA4A-203ENST00000398989 BCORL1Q5H9F3 1711 aa22■■□□□ 1.11
TUBA4A-203ENST00000398989 MYT1LQ9UL68 1186 aa21.99■■□□□ 1.11
TUBA4A-203ENST00000398989 PLEKHH2Q8IVE3 1493 aa21.98■■□□□ 1.11
TUBA4A-203ENST00000398989 KANK4Q5T7N3 995 aaPredicted RBP21.98■■□□□ 1.11
TUBA4A-203ENST00000398989 ADAMTSL3P82987 1691 aa21.98■■□□□ 1.11
TUBA4A-203ENST00000398989 ATP10AO60312 1499 aa21.97■■□□□ 1.11
TUBA4A-203ENST00000398989 APLP2Q06481 763 aa21.97■■□□□ 1.11
TUBA4A-203ENST00000398989 MLH3Q9UHC1 1453 aa21.96■■□□□ 1.11
TUBA4A-203ENST00000398989 HNRNPMP52272 730 aaKnown RBP eCLIP21.96■■□□□ 1.11
TUBA4A-203ENST00000398989 C9orf84Q5VXU9 1444 aa21.96■■□□□ 1.11
TUBA4A-203ENST00000398989 KIAA1107Q9UPP5 1409 aa21.96■■□□□ 1.11
TUBA4A-203ENST00000398989 DIP2CQ9Y2E4 1556 aa21.95■■□□□ 1.11
TUBA4A-203ENST00000398989 ABCA6Q8N139 1617 aa21.95■■□□□ 1.1
TUBA4A-203ENST00000398989 KIDINS220Q9ULH0 1771 aa21.94■■□□□ 1.1
TUBA4A-203ENST00000398989 ZNF644Q9H582 1327 aaPredicted RBP21.94■■□□□ 1.1
TUBA4A-203ENST00000398989 MADDQ8WXG6 1647 aa21.93■■□□□ 1.1
TUBA4A-203ENST00000398989 CAMSAP2Q08AD1 1489 aa21.9■■□□□ 1.1
TUBA4A-203ENST00000398989 SPAG9O60271 1321 aaKnown RBP21.88■■□□□ 1.09
TUBA4A-203ENST00000398989 REREQ9P2R6 1566 aa21.88■■□□□ 1.09
TUBA4A-203ENST00000398989 INO80Q9ULG1 1556 aaPredicted RBP21.88■■□□□ 1.09
TUBA4A-203ENST00000398989 ATP7AQ04656 1500 aa21.88■■□□□ 1.09
TUBA4A-203ENST00000398989 MBD5Q9P267 1494 aa21.88■■□□□ 1.09
TUBA4A-203ENST00000398989 RIMS1Q86UR5 1692 aaKnown RBP21.88■■□□□ 1.09
TUBA4A-203ENST00000398989 MLECQ14165 292 aa21.86■■□□□ 1.09
TUBA4A-203ENST00000398989 PTPRMP28827 1452 aa21.85■■□□□ 1.09
TUBA4A-203ENST00000398989 FER1L4A9Z1Z3 1794 aa21.85■■□□□ 1.09
TUBA4A-203ENST00000398989 MYOM3Q5VTT5 1437 aa21.85■■□□□ 1.09
TUBA4A-203ENST00000398989 CCDC141Q6ZP82 1450 aa21.82■■□□□ 1.08
TUBA4A-203ENST00000398989 ARHGEF5Q12774 1597 aa21.8■■□□□ 1.08
TUBA4A-203ENST00000398989 AGLP35573 1532 aa21.8■■□□□ 1.08
TUBA4A-203ENST00000398989 MIA2Q96PC5 1412 aa21.8■■□□□ 1.08
TUBA4A-203ENST00000398989 ADGBQ8N7X0 1667 aa21.79■■□□□ 1.08
TUBA4A-203ENST00000398989 RTEL1-TNFRSF6BF6WH68 1400 aa21.76■■□□□ 1.07
TUBA4A-203ENST00000398989 RSPH4AQ5TD94 716 aa21.76■■□□□ 1.07
TUBA4A-203ENST00000398989 PLXNC1O60486 1568 aa21.75■■□□□ 1.07
TUBA4A-203ENST00000398989 A2MP01023 1474 aa21.75■■□□□ 1.07
TUBA4A-203ENST00000398989 PTPN23Q9H3S7 1636 aa21.74■■□□□ 1.07
TUBA4A-203ENST00000398989 PLPPR3Q6T4P5 718 aa21.73■■□□□ 1.07
TUBA4A-203ENST00000398989 FGD6Q6ZV73 1430 aa21.71■■□□□ 1.07
TUBA4A-203ENST00000398989 TSPY4P0CV99 314 aa21.7■■□□□ 1.06
TUBA4A-203ENST00000398989 TSPY10P0CW01 314 aa21.7■■□□□ 1.06
TUBA4A-203ENST00000398989 MAST1Q9Y2H9 1570 aa21.68■■□□□ 1.06
TUBA4A-203ENST00000398989 CROCC2H7BZ55 1655 aa21.67■■□□□ 1.06
TUBA4A-203ENST00000398989 ESF1Q9H501 851 aaKnown RBP21.66■■□□□ 1.06
TUBA4A-203ENST00000398989 TCOF1Q13428 1488 aaKnown RBP21.65■■□□□ 1.06
TUBA4A-203ENST00000398989 DHX29Q7Z478 1369 aaKnown RBP21.65■■□□□ 1.06
TUBA4A-203ENST00000398989 C3P01024 1663 aa21.63■■□□□ 1.05
TUBA4A-203ENST00000398989 DNMT1P26358 1616 aaKnown RBP21.63■■□□□ 1.05
TUBA4A-203ENST00000398989 CEBPAP49715 358 aaPredicted RBP21.62■■□□□ 1.05
TUBA4A-203ENST00000398989 CLTCQ00610 1675 aaKnown RBP21.61■■□□□ 1.05
TUBA4A-203ENST00000398989 GGT6Q6P531 493 aa21.61■■□□□ 1.05
TUBA4A-203ENST00000398989 ABCC5O15440 1437 aa21.61■■□□□ 1.05
TUBA4A-203ENST00000398989 CNTLNQ9NXG0 1405 aa21.61■■□□□ 1.05
TUBA4A-203ENST00000398989 MROH2AA6NES4 1674 aa21.6■■□□□ 1.05
TUBA4A-203ENST00000398989 SHANK2Q9UPX8 1470 aa21.6■■□□□ 1.05
TUBA4A-203ENST00000398989 DAPK1P53355 1430 aa21.6■■□□□ 1.05
TUBA4A-203ENST00000398989 PPARGC1BQ86YN6 1023 aaKnown RBP21.59■■□□□ 1.05
TUBA4A-203ENST00000398989 LMTK3Q96Q04 1460 aa21.58■■□□□ 1.05
TUBA4A-203ENST00000398989 KIF3BO15066 747 aa21.57■■□□□ 1.04
TUBA4A-203ENST00000398989 PREX1Q8TCU6 1659 aa21.56■■□□□ 1.04
TUBA4A-203ENST00000398989 FAM50AQ14320 339 aaKnown RBP21.56■■□□□ 1.04
TUBA4A-203ENST00000398989 SETD1BQ9UPS6 1966 aaKnown RBP21.54■■□□□ 1.04
TUBA4A-203ENST00000398989 EIF2AK4Q9P2K8 1649 aaKnown RBP21.53■■□□□ 1.04
TUBA4A-203ENST00000398989 DUOX2Q9NRD8 1548 aa21.53■■□□□ 1.04
TUBA4A-203ENST00000398989 ZMYM3Q14202 1370 aa21.52■■□□□ 1.04
TUBA4A-203ENST00000398989 PPP6R1Q9UPN7 881 aa21.52■■□□□ 1.04
TUBA4A-203ENST00000398989 RNF17Q9BXT8 1623 aaKnown RBP21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms