RNA–Protein interactions for RNA: ENST00000398138.4

RDH16-202, Transcript of retinol dehydrogenase 16, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RDH16, Length 2,409 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH16-202ENST00000398138 ROCK1Q13464 1354 aa18.21■□□□□ 0.51
RDH16-202ENST00000398138 JPH4Q96JJ6 628 aa18.21■□□□□ 0.51
RDH16-202ENST00000398138 ZNF644Q9H582 1327 aaPredicted RBP18.21■□□□□ 0.51
RDH16-202ENST00000398138 KDM5BQ9UGL1 1544 aa18.21■□□□□ 0.51
RDH16-202ENST00000398138 ITSN2Q9NZM3 1697 aa18.19■□□□□ 0.5
RDH16-202ENST00000398138 ADCY10Q96PN6 1610 aa18.18■□□□□ 0.5
RDH16-202ENST00000398138 MPHOSPH9Q99550 1183 aa18.18■□□□□ 0.5
RDH16-202ENST00000398138 KIF14Q15058 1648 aa18.17■□□□□ 0.5
RDH16-202ENST00000398138 CAMSAP2Q08AD1 1489 aa18.17■□□□□ 0.5
RDH16-202ENST00000398138 PELP1Q8IZL8 1130 aaKnown RBP18.16■□□□□ 0.5
RDH16-202ENST00000398138 KCNH8Q96L42 1107 aa18.14■□□□□ 0.5
RDH16-202ENST00000398138 CFDP1Q9UEE9 299 aaPredicted RBP18.14■□□□□ 0.5
RDH16-202ENST00000398138 GPATCH8Q9UKJ3 1502 aaKnown RBP18.14■□□□□ 0.49
RDH16-202ENST00000398138 ABCA8O94911 1581 aa18.12■□□□□ 0.49
RDH16-202ENST00000398138 FOXD1Q16676 465 aa18.11■□□□□ 0.49
RDH16-202ENST00000398138 ADGBQ8N7X0 1667 aa18.1■□□□□ 0.49
RDH16-202ENST00000398138 ZNF777Q9ULD5 760 aaPredicted RBP18.09■□□□□ 0.49
RDH16-202ENST00000398138 CROCC2H7BZ55 1655 aa18.08■□□□□ 0.49
RDH16-202ENST00000398138 ANP32CO43423 234 aa18.07■□□□□ 0.48
RDH16-202ENST00000398138 ANKRD30BQ9BXX2 1392 aa18.06■□□□□ 0.48
RDH16-202ENST00000398138 ATP10BO94823 1461 aa18.06■□□□□ 0.48
RDH16-202ENST00000398138 PLEKHD1A6NEE1 506 aa18.06■□□□□ 0.48
RDH16-202ENST00000398138 NCOA1Q15788 1441 aa18.06■□□□□ 0.48
RDH16-202ENST00000398138 SLC4A1APQ9BWU0 796 aaKnown RBP18.05■□□□□ 0.48
RDH16-202ENST00000398138 ADGRL2O95490 1459 aa18.05■□□□□ 0.48
RDH16-202ENST00000398138 CDC42BPAQ5VT25 1732 aa18.05■□□□□ 0.48
RDH16-202ENST00000398138 L3MBTL2Q969R5 705 aa18.04■□□□□ 0.48
RDH16-202ENST00000398138 RPRD2Q5VT52 1461 aaKnown RBP18.04■□□□□ 0.48
RDH16-202ENST00000398138 ABCC10Q5T3U5 1492 aa18.03■□□□□ 0.48
RDH16-202ENST00000398138 CCER2I3L3R5 266 aa18.02■□□□□ 0.47
RDH16-202ENST00000398138 PZPP20742 1482 aa18.02■□□□□ 0.47
RDH16-202ENST00000398138 HSPA5P11021 654 aaKnown RBP18.01■□□□□ 0.47
RDH16-202ENST00000398138 ANKRD30AQ9BXX3 1397 aa18■□□□□ 0.47
RDH16-202ENST00000398138 TEX14Q8IWB6 1497 aa18■□□□□ 0.47
RDH16-202ENST00000398138 CHD1O14646 1710 aa18■□□□□ 0.47
RDH16-202ENST00000398138 PTPRGP23470 1445 aa18■□□□□ 0.47
RDH16-202ENST00000398138 EIF4G2P78344 907 aaKnown RBP eCLIP17.99■□□□□ 0.47
RDH16-202ENST00000398138 SHANK2Q9UPX8 1470 aa17.97■□□□□ 0.47
RDH16-202ENST00000398138 WASHC2AQ641Q2 1341 aa17.96■□□□□ 0.47
RDH16-202ENST00000398138 C9orf84Q5VXU9 1444 aa17.95■□□□□ 0.46
RDH16-202ENST00000398138 ANKRD50Q9ULJ7 1429 aa17.95■□□□□ 0.46
RDH16-202ENST00000398138 SUPT16HQ9Y5B9 1047 aaKnown RBP17.94■□□□□ 0.46
RDH16-202ENST00000398138 KIAA1107Q9UPP5 1409 aa17.93■□□□□ 0.46
RDH16-202ENST00000398138 NBPF8Q3BBV2 869 aa17.92■□□□□ 0.46
RDH16-202ENST00000398138 SHROOM2Q13796 1616 aa17.91■□□□□ 0.46
RDH16-202ENST00000398138 ARHGEF5Q12774 1597 aa17.89■□□□□ 0.45
RDH16-202ENST00000398138 TSPY4P0CV99 314 aa17.89■□□□□ 0.45
RDH16-202ENST00000398138 TSPY10P0CW01 314 aa17.89■□□□□ 0.45
RDH16-202ENST00000398138 PKD2Q13563 968 aa17.89■□□□□ 0.45
RDH16-202ENST00000398138 PREX2Q70Z35 1606 aa17.89■□□□□ 0.45
RDH16-202ENST00000398138 CDC42BPBQ9Y5S2 1711 aa17.87■□□□□ 0.45
RDH16-202ENST00000398138 HNRNPMP52272 730 aaKnown RBP eCLIP17.87■□□□□ 0.45
RDH16-202ENST00000398138 SAMD9LQ8IVG5 1584 aa17.87■□□□□ 0.45
RDH16-202ENST00000398138 CNTLNQ9NXG0 1405 aa17.86■□□□□ 0.45
RDH16-202ENST00000398138 MBD5Q9P267 1494 aa17.86■□□□□ 0.45
RDH16-202ENST00000398138 NUP155O75694 1391 aa17.86■□□□□ 0.45
RDH16-202ENST00000398138 KIF15Q9NS87 1388 aa17.86■□□□□ 0.45
RDH16-202ENST00000398138 CCDC7Q96M83 1385 aa17.85■□□□□ 0.45
RDH16-202ENST00000398138 CCDC141Q6ZP82 1450 aa17.85■□□□□ 0.45
RDH16-202ENST00000398138 KDM5DQ9BY66 1539 aa17.84■□□□□ 0.45
RDH16-202ENST00000398138 C11orf95C9JLR9 678 aaPredicted RBP17.84■□□□□ 0.45
RDH16-202ENST00000398138 SPATA31E1Q6ZUB1 1445 aa17.83■□□□□ 0.45
RDH16-202ENST00000398138 ERCC6L2Q5T890 1561 aa17.83■□□□□ 0.45
RDH16-202ENST00000398138 TTC37Q6PGP7 1564 aa17.83■□□□□ 0.44
RDH16-202ENST00000398138 ABCC2Q92887 1545 aa17.82■□□□□ 0.44
RDH16-202ENST00000398138 POLR1AO95602 1720 aaPredicted RBP17.81■□□□□ 0.44
RDH16-202ENST00000398138 ARHGAP5Q13017 1502 aa17.8■□□□□ 0.44
RDH16-202ENST00000398138 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.8■□□□□ 0.44
RDH16-202ENST00000398138 SYCP2Q9BX26 1530 aa17.79■□□□□ 0.44
RDH16-202ENST00000398138 ZNF326Q5BKZ1 582 aaKnown RBP17.78■□□□□ 0.44
RDH16-202ENST00000398138 RSPH4AQ5TD94 716 aa17.78■□□□□ 0.44
RDH16-202ENST00000398138 KIF7Q2M1P5 1343 aa17.77■□□□□ 0.44
RDH16-202ENST00000398138 MYO5CQ9NQX4 1742 aa17.76■□□□□ 0.43
RDH16-202ENST00000398138 USP47Q96K76 1375 aa17.75■□□□□ 0.43
RDH16-202ENST00000398138 MAST1Q9Y2H9 1570 aa17.74■□□□□ 0.43
RDH16-202ENST00000398138 ARHGEF12Q9NZN5 1544 aa17.74■□□□□ 0.43
RDH16-202ENST00000398138 FAM135AQ9P2D6 1515 aa17.74■□□□□ 0.43
RDH16-202ENST00000398138 CLASP1Q7Z460 1538 aa17.73■□□□□ 0.43
RDH16-202ENST00000398138 UHRF1BP1Q6BDS2 1440 aa17.73■□□□□ 0.43
RDH16-202ENST00000398138 KDM5CP41229 1560 aa17.72■□□□□ 0.43
RDH16-202ENST00000398138 HNRNPUQ00839 825 aaKnown RBP eCLIP17.72■□□□□ 0.43
RDH16-202ENST00000398138 FKBP8Q14318 412 aa17.72■□□□□ 0.43
RDH16-202ENST00000398138 PRKRIP1Q9H875 184 aaPredicted RBP17.72■□□□□ 0.43
RDH16-202ENST00000398138 RALGAPBQ86X10 1494 aa17.71■□□□□ 0.43
RDH16-202ENST00000398138 PLEKHH2Q8IVE3 1493 aa17.71■□□□□ 0.43
RDH16-202ENST00000398138 ZCCHC11Q5TAX3 1644 aaKnown RBP17.71■□□□□ 0.42
RDH16-202ENST00000398138 BCORL1Q5H9F3 1711 aa17.69■□□□□ 0.42
RDH16-202ENST00000398138 NEFLP07196 543 aa17.69■□□□□ 0.42
RDH16-202ENST00000398138 UNC13BO14795 1591 aa17.68■□□□□ 0.42
RDH16-202ENST00000398138 PLXNC1O60486 1568 aa17.68■□□□□ 0.42
RDH16-202ENST00000398138 CCDC184Q52MB2 194 aa17.68■□□□□ 0.42
RDH16-202ENST00000398138 BCANQ96GW7 911 aa17.68■□□□□ 0.42
RDH16-202ENST00000398138 UHRF1BP1LA0JNW5 1464 aa17.67■□□□□ 0.42
RDH16-202ENST00000398138 KDM2AQ9Y2K7 1162 aa17.66■□□□□ 0.42
RDH16-202ENST00000398138 CARD11Q9BXL7 1154 aa17.65■□□□□ 0.42
RDH16-202ENST00000398138 PLCH2O75038 1416 aa17.65■□□□□ 0.42
RDH16-202ENST00000398138 DCAF11Q8TEB1 546 aa17.64■□□□□ 0.42
RDH16-202ENST00000398138 POLR3GLQ9BT43 218 aa17.64■□□□□ 0.41
RDH16-202ENST00000398138 MRS2Q9HD23 443 aa17.64■□□□□ 0.41
RDH16-202ENST00000398138 CCDC144AA2RUR9 1427 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms