RNA–Protein interactions for RNA: ENST00000397938.6

EWSR1-206, Transcript of EWS RNA binding protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene EWSR1, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-206ENST00000397938 MIA2Q96PC5 1412 aa23.67■■□□□ 1.38
EWSR1-206ENST00000397938 SPATA31E1Q6ZUB1 1445 aa23.67■■□□□ 1.38
EWSR1-206ENST00000397938 GAPVD1Q14C86 1478 aa23.65■■□□□ 1.38
EWSR1-206ENST00000397938 KIF7Q2M1P5 1343 aa23.65■■□□□ 1.38
EWSR1-206ENST00000397938 NESP48681 1621 aa23.65■■□□□ 1.38
EWSR1-206ENST00000397938 SMG6Q86US8 1419 aaKnown RBP23.64■■□□□ 1.38
EWSR1-206ENST00000397938 NBPF8Q3BBV2 869 aa23.64■■□□□ 1.38
EWSR1-206ENST00000397938 ANKRD30BQ9BXX2 1392 aa23.64■■□□□ 1.38
EWSR1-206ENST00000397938 URB2Q14146 1524 aaKnown RBP23.64■■□□□ 1.37
EWSR1-206ENST00000397938 DEKP35659 375 aaKnown RBP23.64■■□□□ 1.37
EWSR1-206ENST00000397938 NOP58Q9Y2X3 529 aaKnown RBP23.64■■□□□ 1.37
EWSR1-206ENST00000397938 LAMC3Q9Y6N6 1575 aa23.63■■□□□ 1.37
EWSR1-206ENST00000397938 TDRD9Q8NDG6 1382 aaKnown RBP23.62■■□□□ 1.37
EWSR1-206ENST00000397938 FOXD1Q16676 465 aa23.62■■□□□ 1.37
EWSR1-206ENST00000397938 EPRSP07814 1512 aaKnown RBP23.61■■□□□ 1.37
EWSR1-206ENST00000397938 ROCK1Q13464 1354 aa23.57■■□□□ 1.36
EWSR1-206ENST00000397938 RNF123Q5XPI4 1314 aa23.57■■□□□ 1.36
EWSR1-206ENST00000397938 CDK13Q14004 1512 aaKnown RBP23.55■■□□□ 1.36
EWSR1-206ENST00000397938 NUDCQ9Y266 331 aa23.54■■□□□ 1.36
EWSR1-206ENST00000397938 DHX29Q7Z478 1369 aaKnown RBP23.54■■□□□ 1.36
EWSR1-206ENST00000397938 DAPK1P53355 1430 aa23.53■■□□□ 1.36
EWSR1-206ENST00000397938 PAK3O75914 559 aaPredicted RBP23.53■■□□□ 1.36
EWSR1-206ENST00000397938 WDR62O43379 1518 aa23.52■■□□□ 1.36
EWSR1-206ENST00000397938 DNMT1P26358 1616 aaKnown RBP23.52■■□□□ 1.36
EWSR1-206ENST00000397938 IQGAP2Q13576 1575 aa23.48■■□□□ 1.35
EWSR1-206ENST00000397938 CCDC136Q96JN2 1154 aa23.47■■□□□ 1.35
EWSR1-206ENST00000397938 ABCC5O15440 1437 aa23.47■■□□□ 1.35
EWSR1-206ENST00000397938 NBR1Q14596 966 aa23.46■■□□□ 1.35
EWSR1-206ENST00000397938 MBD5Q9P267 1494 aa23.46■■□□□ 1.35
EWSR1-206ENST00000397938 BCORL1Q5H9F3 1711 aa23.46■■□□□ 1.35
EWSR1-206ENST00000397938 ANP32AP39687 249 aaKnown RBP23.45■■□□□ 1.34
EWSR1-206ENST00000397938 SLC4A1APQ9BWU0 796 aaKnown RBP23.45■■□□□ 1.34
EWSR1-206ENST00000397938 IPO9Q96P70 1041 aaKnown RBP23.44■■□□□ 1.34
EWSR1-206ENST00000397938 PZPP20742 1482 aa23.41■■□□□ 1.34
EWSR1-206ENST00000397938 TARBP1Q13395 1621 aaKnown RBP23.41■■□□□ 1.34
EWSR1-206ENST00000397938 KIF14Q15058 1648 aa23.4■■□□□ 1.34
EWSR1-206ENST00000397938 USP47Q96K76 1375 aa23.4■■□□□ 1.34
EWSR1-206ENST00000397938 PBRM1Q86U86 1689 aa23.39■■□□□ 1.33
EWSR1-206ENST00000397938 KDM5CP41229 1560 aa23.39■■□□□ 1.33
EWSR1-206ENST00000397938 ARID4BQ4LE39 1312 aaPredicted RBP23.38■■□□□ 1.33
EWSR1-206ENST00000397938 PNISRQ8TF01 805 aaKnown RBP23.36■■□□□ 1.33
EWSR1-206ENST00000397938 ZBTB47Q9UFB7 747 aaPredicted RBP23.34■■□□□ 1.33
EWSR1-206ENST00000397938 ARID3CA6NKF2 412 aa23.34■■□□□ 1.33
EWSR1-206ENST00000397938 ADAMTS12P58397 1594 aa23.34■■□□□ 1.33
EWSR1-206ENST00000397938 ZNF644Q9H582 1327 aaPredicted RBP23.33■■□□□ 1.32
EWSR1-206ENST00000397938 ROCK2O75116 1388 aaKnown RBP23.32■■□□□ 1.32
EWSR1-206ENST00000397938 CNGB1Q14028 1251 aaPredicted RBP23.32■■□□□ 1.32
EWSR1-206ENST00000397938 KIAA1107Q9UPP5 1409 aa23.31■■□□□ 1.32
EWSR1-206ENST00000397938 ADGBQ8N7X0 1667 aa23.31■■□□□ 1.32
EWSR1-206ENST00000397938 RTL5Q5HYW3 569 aaPredicted RBP23.3■■□□□ 1.32
EWSR1-206ENST00000397938 POLR3GLQ9BT43 218 aa23.3■■□□□ 1.32
EWSR1-206ENST00000397938 PDS5BQ9NTI5 1447 aa23.3■■□□□ 1.32
EWSR1-206ENST00000397938 LRPPRCP42704 1394 aaKnown RBP23.29■■□□□ 1.32
EWSR1-206ENST00000397938 TMC1Q8TDI8 760 aa23.28■■□□□ 1.32
EWSR1-206ENST00000397938 RALGAPBQ86X10 1494 aa23.27■■□□□ 1.32
EWSR1-206ENST00000397938 UHRF1BP1Q6BDS2 1440 aa23.26■■□□□ 1.31
EWSR1-206ENST00000397938 NUP153P49790 1475 aaKnown RBP23.25■■□□□ 1.31
EWSR1-206ENST00000397938 KIF15Q9NS87 1388 aa23.25■■□□□ 1.31
EWSR1-206ENST00000397938 CAMSAP2Q08AD1 1489 aa23.25■■□□□ 1.31
EWSR1-206ENST00000397938 ZNF326Q5BKZ1 582 aaKnown RBP23.24■■□□□ 1.31
EWSR1-206ENST00000397938 SENP3-EIF4A1A0A087X0R7 540 aa23.23■■□□□ 1.31
EWSR1-206ENST00000397938 ADGRL2O95490 1459 aa23.23■■□□□ 1.31
EWSR1-206ENST00000397938 KIAA0556O60303 1618 aa23.23■■□□□ 1.31
EWSR1-206ENST00000397938 BRD4O60885 1362 aaPredicted RBP23.23■■□□□ 1.31
EWSR1-206ENST00000397938 RRP1P56182 461 aaKnown RBP23.22■■□□□ 1.31
EWSR1-206ENST00000397938 CROCC2H7BZ55 1655 aa23.22■■□□□ 1.31
EWSR1-206ENST00000397938 RAPGEF6Q8TEU7 1601 aa23.22■■□□□ 1.31
EWSR1-206ENST00000397938 ITSN2Q9NZM3 1697 aa23.21■■□□□ 1.31
EWSR1-206ENST00000397938 KTN1Q86UP2 1357 aaKnown RBP23.21■■□□□ 1.31
EWSR1-206ENST00000397938 E9PCH4 1651 aa23.2■■□□□ 1.3
EWSR1-206ENST00000397938 TCERG1O14776 1098 aaKnown RBP23.19■■□□□ 1.3
EWSR1-206ENST00000397938 MYBBP1AQ9BQG0 1328 aaKnown RBP23.19■■□□□ 1.3
EWSR1-206ENST00000397938 DISP1Q96F81 1524 aa23.18■■□□□ 1.3
EWSR1-206ENST00000397938 PKD2Q13563 968 aa23.18■■□□□ 1.3
EWSR1-206ENST00000397938 ARHGEF12Q9NZN5 1544 aa23.18■■□□□ 1.3
EWSR1-206ENST00000397938 EXOC6Q8TAG9 804 aa23.16■■□□□ 1.3
EWSR1-206ENST00000397938 RALBP1Q15311 655 aa23.16■■□□□ 1.3
EWSR1-206ENST00000397938 TROQ12816 1431 aaPredicted RBP23.15■■□□□ 1.3
EWSR1-206ENST00000397938 CARD11Q9BXL7 1154 aa23.14■■□□□ 1.29
EWSR1-206ENST00000397938 RCAN3Q9UKA8 241 aa23.13■■□□□ 1.29
EWSR1-206ENST00000397938 CFDP1Q9UEE9 299 aaPredicted RBP23.12■■□□□ 1.29
EWSR1-206ENST00000397938 GPATCH8Q9UKJ3 1502 aaKnown RBP23.12■■□□□ 1.29
EWSR1-206ENST00000397938 PDE4AP27815 886 aa23.12■■□□□ 1.29
EWSR1-206ENST00000397938 PRG4Q92954 1404 aaPredicted RBP23.11■■□□□ 1.29
EWSR1-206ENST00000397938 KIAA0586Q9BVV6 1533 aa23.11■■□□□ 1.29
EWSR1-206ENST00000397938 NPM2Q86SE8 214 aaKnown RBP23.11■■□□□ 1.29
EWSR1-206ENST00000397938 ANKRD30AQ9BXX3 1397 aa23.11■■□□□ 1.29
EWSR1-206ENST00000397938 ADCY10Q96PN6 1610 aa23.11■■□□□ 1.29
EWSR1-206ENST00000397938 MS4A1P11836 297 aa23.1■■□□□ 1.29
EWSR1-206ENST00000397938 BACH2Q9BYV9 841 aa23.09■■□□□ 1.29
EWSR1-206ENST00000397938 ANKRD50Q9ULJ7 1429 aa23.09■■□□□ 1.29
EWSR1-206ENST00000397938 PDE3BQ13370 1112 aa23.08■■□□□ 1.29
EWSR1-206ENST00000397938 ST20-MTHFSA0A0A6YYL1 179 aa23.07■■□□□ 1.28
EWSR1-206ENST00000397938 USP35Q9P2H5 1018 aa23.07■■□□□ 1.28
EWSR1-206ENST00000397938 CEP170Q5SW79 1584 aa23.05■■□□□ 1.28
EWSR1-206ENST00000397938 KDM5DQ9BY66 1539 aa23.05■■□□□ 1.28
EWSR1-206ENST00000397938 PARD3Q8TEW0 1356 aa23.04■■□□□ 1.28
EWSR1-206ENST00000397938 NLRP13Q86W25 1043 aa23.04■■□□□ 1.28
EWSR1-206ENST00000397938 NEFMP07197 916 aa23.03■■□□□ 1.28
EWSR1-206ENST00000397938 LAS1LQ9Y4W2 734 aaKnown RBP23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms